Mir201 (microRNA 201) - Rat Genome Database
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Gene: Mir201 (microRNA 201) Mus musculus
Analyze
Symbol: Mir201
Name: microRNA 201
RGD ID: 1608294
MGI Page MGI
Description: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: mir-201; Mirn; Mirn201; mmu-mir-2; mmu-mir-201
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X67,031,702 - 67,031,767 (-)NCBIGRCm39mm39
GRCm38X67,988,096 - 67,988,161 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX67,988,096 - 67,988,161 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X65,241,271 - 65,241,336 (-)NCBIGRCm37mm9NCBIm37
CeleraX53,822,930 - 53,822,995 (+)NCBICelera
Cytogenetic MapXA7.1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:12554859   PMID:12554860   PMID:16381832   PMID:17369397   PMID:17604727   PMID:20215419   PMID:20413612   PMID:21037258   PMID:21267068   PMID:22144232  


Genomics


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7360056151324042Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3600000078000000Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX4006835474068454Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX4006835474068454Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX4083262187216531Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4243170076431843Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4265674676656858Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4698383880983961Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined48090244130864007Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5168349871391145Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5290000090700000Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X55000000150000000Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5567874589678745Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5872835492728354Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6230000090800000Mouse
12050071Hstx2_mhybrid sterility, X chromosome 2 (mouse)X6488064169581094Mouse

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:18896
Count of gene targets:8247
Count of transcripts:13306
Interacting mature miRNAs:mmu-miR-201-3p, mmu-miR-201-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000083470
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX67,988,096 - 67,988,161 (-)Ensembl
RefSeq Acc Id: NR_029588
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X67,031,702 - 67,031,767 (-)NCBI
GRCm38X67,988,096 - 67,988,161 (-)ENTREZGENE
MGSCv37X65,241,271 - 65,241,336 (-)RGD
CeleraX53,822,930 - 53,822,995 (+)RGD
cM MapX ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000065404 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083470 ENTREZGENE
MGD MGI:2676876 ENTREZGENE
miRBase MI0000244 ENTREZGENE
NCBI Gene 387197 ENTREZGENE
PhenoGen Mir201 PhenoGen
RNAcentral URS000010FA41 RNACentral
  URS00001E8140 RNACentral
  URS000075A62C RNACentral