Mir323 (microRNA 323) - Rat Genome Database
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Gene: Mir323 (microRNA 323) Mus musculus
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Symbol: Mir323
Name: microRNA 323
RGD ID: 1608213
MGI Page MGI
Description: Involved in cellular response to leukemia inhibitory factor and cellular response to lipopolysaccharide. Is expressed in brain; liver; lung; and tongue. Orthologous to human MIR323A (microRNA 323a).
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: mir-323; Mirn; Mirn323; mmu-mir-3; mmu-mir-323
RGD Orthologs
Human
Rat
Dog
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912109,678,942 - 109,679,027 (+)NCBIGRCm39mm39
GRCm3812109,712,508 - 109,712,593 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12109,712,508 - 109,712,593 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712110,950,718 - 110,950,803 (+)NCBIGRCm37mm9NCBIm37
Celera12110,909,734 - 110,909,819 (+)NCBICelera
Cytogenetic Map12F1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

Additional References at PubMed
PMID:14691248   PMID:15310658   PMID:16381832   PMID:17369397   PMID:17604727   PMID:18452032   PMID:18594913   PMID:19264764   PMID:19559694   PMID:20215419   PMID:20413612   PMID:20439489  
PMID:21037258   PMID:21247879   PMID:21267068   PMID:22144232   PMID:22562984   PMID:23821546   PMID:26107383   PMID:29512400   PMID:31218742   PMID:31301299  


Genomics

Comparative Map Data
Mir323
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912109,678,942 - 109,679,027 (+)NCBIGRCm39mm39
GRCm3812109,712,508 - 109,712,593 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12109,712,508 - 109,712,593 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712110,950,718 - 110,950,803 (+)NCBIGRCm37mm9NCBIm37
Celera12110,909,734 - 110,909,819 (+)NCBICelera
Cytogenetic Map12F1NCBI
MIR323A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl14101,025,732 - 101,025,817 (+)EnsemblGRCh38hg38GRCh38
GRCh3814101,025,732 - 101,025,817 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3714101,492,069 - 101,492,154 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3614100,561,821 - 100,561,906 (+)NCBINCBI36hg18NCBI36
Celera1481,548,101 - 81,548,186 (+)NCBI
Cytogenetic Map14q32.31NCBI
HuRef1481,675,552 - 81,675,637 (+)NCBIHuRef
CHM1_114101,430,205 - 101,430,290 (+)NCBICHM1_1
Mir323
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26128,725,539 - 128,725,624 (+)NCBI
Rnor_6.0 Ensembl6133,861,199 - 133,861,284 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.06133,861,199 - 133,861,284 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06143,023,370 - 143,023,455 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera6126,309,920 - 126,310,005 (+)NCBICelera
Cytogenetic Map6q32NCBI
MIR323
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl869,257,479 - 69,257,564 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1869,257,494 - 69,257,549 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235235497109969809Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268300000113400000Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277545446111545446Mouse
4142401Egq10_mearly growth QTL 10 (mouse)Not determined80909934113419913Mouse
4141335W6q10_mweight 6 weeks QTL 10 (mouse)Not determined80909934113419913Mouse
4141610Tailaq1_mtail length adjusted QTL 1 (mouse)Not determined80909934113419913Mouse
1357701Lvrq10_mliver weight QTL 10 (mouse)Not determined1280909934113419913Mouse
39128213Lwq23_mliver weight QTL 10 (mouse)1280909934113419913Mouse
13524849Ppiq11a_mprepulse inhibition QTL 11a (mouse)1281022884115022884Mouse
13524846Ppiq11_mprepulse inhibition QTL 11 (mouse)1282700137116700137Mouse
1301879Insq10_minsulin QTL 10 (mouse)Not determined1283565816117565965Mouse
1301492Dbsty3_mdiabesity 3 (mouse)Not determined1283565816117565965Mouse
1300883Ath21_matherosclerosis 21 (mouse)Not determined1285995320119995424Mouse
10412156Nociq3_mnociceptive sensitivity inflammatory QTL 3 (mouse)Not determined1286349301114868033Mouse
4142007Chlq17_mcirculating hormone level QTL 17 (mouse)Not determined1288086615120129022Mouse
1300545Lifespan3_mlife span 3 (mouse)Not determined1288086615120129022Mouse
1301308Prdt4_mprion disease incubation time 4 (mouse)Not determined1288342095120129022Mouse
5491194Mobq3_mmultigenic obesity QTL 3 (mouse)Not determined1289697812120129022Mouse
1301836Heal5_mwound healing/regeneration 5 (mouse)Not determined1289972772120129022Mouse
1301922Bbaa6_mB.burgdorferi-associated arthritis 6 (mouse)Not determined1290342009120129022Mouse
10402491Dipa4_mdrug induced psychomotor activation 4 (mouse)Not determined1291256256120129022Mouse
12910532Nrq10a_mnoise-induced hearing loss resistant QTL 10a (mouse)1292783591120129022Mouse
12910533Nrq10_mnoise-induced hearing loss resistant QTL 10 (mouse)1292783591120129022Mouse
1357463Vtbt14_mvertebral trabecular bone trait 14 (mouse)Not determined1292969663120129022Mouse
1300973Abmm_mantibody mediated myocarditis (mouse)Not determined1293298027120129022Mouse
1302177Dps2_mdelta power in slow-wave sleep 2 (mouse)Not determined1294179630120129022Mouse
1302138Im6_mimmunoregulatory 6 (mouse)Not determined1296896717120129022Mouse
1301269Sluc12_msusceptibility to lung cancer 12 (mouse)Not determined1296896717120129022Mouse
10412075Nils1_mneointima lesion size 1 (mouse)Not determined12102060930120129022Mouse
4141297Plyid_mPolymeric IgA dominance (mouse)Not determined109217459115921502Mouse

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:21105
Count of gene targets:9905
Count of transcripts:16098
Interacting mature miRNAs:mmu-miR-323-3p, mmu-miR-323-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000083683
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl12109,712,508 - 109,712,593 (+)Ensembl
RefSeq Acc Id: NR_029757
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912109,678,942 - 109,679,027 (+)NCBI
GRCm3812109,712,508 - 109,712,593 (+)ENTREZGENE
MGSCv3712110,950,718 - 110,950,803 (+)RGD
Celera12110,909,734 - 110,909,819 (+)RGD
cM Map12 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3619334 AgrOrtholog
Ensembl Genes ENSMUSG00000065617 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000083683 ENTREZGENE
MGD MGI:3619334 ENTREZGENE
miRBase MI0000592 ENTREZGENE
NCBI Gene 723839 ENTREZGENE
PhenoGen Mir323 PhenoGen
RNAcentral URS000018E72A RNACentral
  URS00003CCAB4 RNACentral
  URS000075E0DE RNACentral