4930556J24Rik (RIKEN cDNA 4930556J24 gene) - Rat Genome Database

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Gene: 4930556J24Rik (RIKEN cDNA 4930556J24 gene) Mus musculus
Analyze
Symbol: 4930556J24Rik
Name: RIKEN cDNA 4930556J24 gene
RGD ID: 1607407
MGI Page MGI
Description:
Type: protein-coding
Previously known as: hypothetical protein LOC75342; RP23-81P12.2; uncharacterized protein LOC75342
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl113,887,541 - 3,926,778 (-)EnsemblGRCm39 Ensembl
GRCm38113,937,541 - 3,976,778 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl113,937,541 - 3,976,778 (-)EnsemblGRCm38mm10GRCm38
MGSCv37113,837,544 - 3,876,781 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera114,432,115 - 4,472,055 (-)NCBICelera
cM Map112.77NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:14610273   PMID:16141072   PMID:16141073   PMID:17967808  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:168
Count of miRNA genes:148
Interacting mature miRNAs:161
Transcripts:ENSMUST00000042344
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
Pes1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38113,977,269 - 3,977,474UniSTSGRCm38
MGSCv37113,877,272 - 3,877,477UniSTSGRCm37
Celera114,472,546 - 4,472,751UniSTS
Cytogenetic Map11A1UniSTS
cM Map11 UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000042344   ⟹   ENSMUSP00000048953
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl113,887,541 - 3,926,778 (-)Ensembl
GRCm38.p6 Ensembl113,937,541 - 3,976,778 (-)Ensembl
RefSeq Acc Id: XM_003084882   ⟹   XP_003084930
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38113,937,541 - 3,976,778 (-)ENTREZGENE
MGSCv37113,837,544 - 3,876,781 (-)RGD
cM Map11 ENTREZGENE
RefSeq Acc Id: XM_003085769   ⟹   XP_003085817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
Celera114,432,115 - 4,472,055 (-)RGD
Protein Sequences
GenBank Protein BAB30126 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000048953.2
RefSeq Acc Id: XP_003084930   ⟸   XM_003084882
RefSeq Acc Id: XP_003085817   ⟸   XM_003085769
RefSeq Acc Id: ENSMUSP00000048953   ⟸   ENSMUST00000042344

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9D4U7-F1-model_v2 AlphaFold Q9D4U7 1-146 view protein structure


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000034493 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000042344.2 UniProtKB/TrEMBL
MGD MGI:1922592 ENTREZGENE
NCBI Gene 75342 ENTREZGENE
PhenoGen 4930556J24Rik PhenoGen
UniProt Q9D4U7_MOUSE UniProtKB/TrEMBL