Dgat2l6 (diacylglycerol O-acyltransferase 2-like 6) - Rat Genome Database

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Gene: Dgat2l6 (diacylglycerol O-acyltransferase 2-like 6) Mus musculus
Analyze
Symbol: Dgat2l6
Name: diacylglycerol O-acyltransferase 2-like 6
RGD ID: 1607119
MGI Page MGI
Description: Predicted to enable diacylglycerol O-acyltransferase activity. Predicted to be involved in monoacylglycerol biosynthetic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be active in endoplasmic reticulum membrane. Is expressed in Harderian gland; ileum; jejunum; and skin. Orthologous to human DGAT2L6 (diacylglycerol O-acyltransferase 2 like 6).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 9930021F22Rik; diacylglycerol O-acyltransferase 2-like protein 6
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X99,568,444 - 99,589,714 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX99,568,444 - 99,589,750 (+)EnsemblGRCm39 Ensembl
GRCm38X100,524,838 - 100,546,108 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX100,524,838 - 100,546,144 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X97,720,177 - 97,741,447 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X96,742,703 - 96,748,319 (+)NCBIMGSCv36mm8
CeleraX87,451,191 - 87,472,159 (+)NCBICelera
Cytogenetic MapXC3NCBI
cM MapX43.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:21677750   PMID:21873635   PMID:24194600  


Genomics

Comparative Map Data
Dgat2l6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X99,568,444 - 99,589,714 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX99,568,444 - 99,589,750 (+)EnsemblGRCm39 Ensembl
GRCm38X100,524,838 - 100,546,108 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX100,524,838 - 100,546,144 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X97,720,177 - 97,741,447 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X96,742,703 - 96,748,319 (+)NCBIMGSCv36mm8
CeleraX87,451,191 - 87,472,159 (+)NCBICelera
Cytogenetic MapXC3NCBI
cM MapX43.72NCBI
DGAT2L6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X70,177,483 - 70,205,704 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX70,177,483 - 70,205,704 (+)EnsemblGRCh38hg38GRCh38
GRCh37X69,397,333 - 69,425,554 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X69,314,061 - 69,342,278 (+)NCBINCBI36Build 36hg18NCBI36
CeleraX69,750,703 - 69,778,926 (+)NCBICelera
Cytogenetic MapXq13.1NCBI
HuRefX63,218,725 - 63,246,915 (+)NCBIHuRef
CHM1_1X69,290,951 - 69,319,173 (+)NCBICHM1_1
T2T-CHM13v2.0X68,610,847 - 68,639,072 (+)NCBIT2T-CHM13v2.0
Dgat2l6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X69,654,519 - 69,678,049 (+)NCBIGRCr8
mRatBN7.2X65,614,430 - 65,637,962 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX65,614,430 - 65,637,962 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX67,097,843 - 67,121,379 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X70,598,229 - 70,621,767 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X68,159,131 - 68,182,674 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X70,354,357 - 70,377,887 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX70,354,360 - 70,377,825 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X71,226,309 - 71,250,455 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X88,516,406 - 88,539,958 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX65,973,837 - 65,997,431 (+)NCBICelera
Cytogenetic MapXq22NCBI
Dgat2l6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554759,708,402 - 9,731,900 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554759,708,402 - 9,733,712 (+)NCBIChiLan1.0ChiLan1.0
DGAT2L6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X69,854,374 - 69,882,525 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X69,857,976 - 69,886,127 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X59,445,558 - 59,473,714 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X69,504,786 - 69,532,813 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX69,504,786 - 69,532,813 (+)Ensemblpanpan1.1panPan2
DGAT2L6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X54,622,521 - 54,657,141 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX54,622,317 - 54,684,231 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX45,448,300 - 45,483,222 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X55,588,599 - 55,623,577 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX55,588,452 - 55,651,935 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X53,557,652 - 53,592,560 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X54,888,447 - 54,923,357 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X54,815,616 - 54,850,534 (+)NCBIUU_Cfam_GSD_1.0
Dgat2l6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X47,500,161 - 47,507,809 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367621,262,870 - 1,281,432 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367621,262,374 - 1,268,979 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DGAT2L6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX56,216,066 - 56,239,196 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X56,212,494 - 56,239,641 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X63,424,500 - 63,434,204 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DGAT2L6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X60,018,508 - 60,048,540 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX60,041,748 - 60,047,814 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660651,871,124 - 1,899,623 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dgat2l6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624903107,211 - 130,231 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624903107,211 - 130,304 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dgat2l6
536 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:366
Count of miRNA genes:275
Interacting mature miRNAs:305
Transcripts:ENSMUST00000037541, ENSMUST00000140551
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse
1302054Gct4_mgranulosa cell tumorigenesis 4 (mouse)Not determinedX76124336102062720Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse

Markers in Region
px-30f1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X100,540,423 - 100,540,718UniSTSGRCm38
MGSCv37X97,735,762 - 97,736,057UniSTSGRCm37
CeleraX87,466,476 - 87,466,771UniSTS
Cytogenetic MapXC3UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000037541   ⟹   ENSMUSP00000036845
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX99,568,447 - 99,589,750 (+)Ensembl
GRCm38.p6 EnsemblX100,524,841 - 100,546,144 (+)Ensembl
RefSeq Acc Id: ENSMUST00000140551
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX99,568,444 - 99,589,497 (+)Ensembl
GRCm38.p6 EnsemblX100,524,838 - 100,545,891 (+)Ensembl
RefSeq Acc Id: NM_001114084   ⟹   NP_001107556
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X99,568,444 - 99,589,714 (+)NCBI
GRCm38X100,524,838 - 100,546,108 (+)NCBI
MGSCv37X97,720,177 - 97,741,447 (+)RGD
CeleraX87,451,191 - 87,472,159 (+)RGD
cM MapX ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001107556 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A2ADU8 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000036845
  ENSMUSP00000036845.9
RefSeq Acc Id: NP_001107556   ⟸   NM_001114084
- UniProtKB: A2ADU8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000036845   ⟸   ENSMUST00000037541

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2ADU8-F1-model_v2 AlphaFold A2ADU8 1-337 view protein structure

Promoters
RGD ID:13681028
Promoter ID:EPDNEW_M24663
Type:initiation region
Name:Dgat2l6_1
Description:Mus musculus diacylglycerol O-acyltransferase 2-like 6 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X100,524,838 - 100,524,898EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3045268 AgrOrtholog
Ensembl Genes ENSMUSG00000067597 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000037541 ENTREZGENE
  ENSMUST00000037541.9 UniProtKB/Swiss-Prot
InterPro DAGAT UniProtKB/Swiss-Prot
KEGG Report mmu:668257 UniProtKB/Swiss-Prot
MGD MGI:3045268 ENTREZGENE
NCBI Gene 668257 ENTREZGENE
PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE UniProtKB/Swiss-Prot
  DIACYLGLYCEROL O-ACYLTRANSFERASE 2-LIKE PROTEIN 6 UniProtKB/Swiss-Prot
Pfam DAGAT UniProtKB/Swiss-Prot
PhenoGen Dgat2l6 PhenoGen
Superfamily-SCOP Glycerol-3-phosphate (1)-acyltransferase UniProtKB/Swiss-Prot
UniProt A2ADU8 ENTREZGENE, UniProtKB/Swiss-Prot