KRT8P24 (keratin 8 pseudogene 24) - Rat Genome Database

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Gene: KRT8P24 (keratin 8 pseudogene 24) Homo sapiens
Analyze
Symbol: KRT8P24
Name: keratin 8 pseudogene 24
RGD ID: 1606847
HGNC Page HGNC:33376
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: KRT8  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381548,971,725 - 48,973,564 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1548,971,803 - 48,973,361 (+)EnsemblGRCh38hg38GRCh38
GRCh371549,263,922 - 49,265,761 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361547,045,153 - 47,052,853 (+)NCBINCBI36Build 36hg18NCBI36
Celera1526,157,548 - 26,159,387 (+)NCBICelera
Cytogenetic Map15q21.1NCBI
HuRef1526,095,940 - 26,097,791 (+)NCBIHuRef
CHM1_11549,381,945 - 49,383,784 (+)NCBICHM1_1
T2T-CHM13v2.01546,779,950 - 46,781,789 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:448
Count of miRNA genes:399
Interacting mature miRNAs:441
Transcripts:ENST00000560290
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 1 2
Below cutoff 719 490 430 143 156 79 604 345 509 46 361 390 64 210 411

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000560290
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1548,971,803 - 48,973,361 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC KRT8P24 COSMIC
Ensembl Genes ENSG00000259500 Ensembl
GTEx ENSG00000259500 GTEx
HGNC ID HGNC:33376 ENTREZGENE
Human Proteome Map KRT8P24 Human Proteome Map
NCBI Gene 729344 ENTREZGENE