SLC25A44 (solute carrier family 25 member 44) - Rat Genome Database

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Gene: SLC25A44 (solute carrier family 25 member 44) Homo sapiens
Analyze
Symbol: SLC25A44
Name: solute carrier family 25 member 44
RGD ID: 1605709
HGNC Page HGNC:29036
Description: Predicted to enable branched-chain amino acid transmembrane transporter activity. Involved in branched-chain amino acid catabolic process. Predicted to be located in mitochondrial membrane. Predicted to be active in mitochondrion.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FLJ90431; KIAA0446; RP11-54H19.3; solute carrier family 25, member 44
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381156,194,104 - 156,212,796 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1156,193,932 - 156,212,796 (+)EnsemblGRCh38hg38GRCh38
GRCh371156,163,895 - 156,182,587 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361154,430,523 - 154,449,211 (+)NCBINCBI36Build 36hg18NCBI36
Celera1129,236,709 - 129,255,567 (+)NCBICelera
Cytogenetic Map1q22NCBI
HuRef1127,525,453 - 127,544,319 (+)NCBIHuRef
CHM1_11157,559,700 - 157,578,555 (+)NCBICHM1_1
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
mitochondrial membrane  (IEA)
mitochondrion  (IBA,IEA,ISS)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9455484   PMID:12477932   PMID:15489334   PMID:16303743   PMID:16710414   PMID:16949250   PMID:19322201   PMID:20877624   PMID:21873635   PMID:22939629   PMID:23266187   PMID:23666240  
PMID:24656865   PMID:26186194   PMID:28514442   PMID:31435015   PMID:32393512   PMID:33762134   PMID:33961781   PMID:34073512  


Genomics

Comparative Map Data
SLC25A44
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381156,194,104 - 156,212,796 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1156,193,932 - 156,212,796 (+)EnsemblGRCh38hg38GRCh38
GRCh371156,163,895 - 156,182,587 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361154,430,523 - 154,449,211 (+)NCBINCBI36Build 36hg18NCBI36
Celera1129,236,709 - 129,255,567 (+)NCBICelera
Cytogenetic Map1q22NCBI
HuRef1127,525,453 - 127,544,319 (+)NCBIHuRef
CHM1_11157,559,700 - 157,578,555 (+)NCBICHM1_1
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBIT2T-CHM13v2.0
Slc25a44
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39388,317,801 - 88,334,303 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl388,317,805 - 88,332,446 (-)EnsemblGRCm39 Ensembl
GRCm38388,410,494 - 88,425,141 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl388,410,498 - 88,425,139 (-)EnsemblGRCm38mm10GRCm38
MGSCv37388,214,417 - 88,229,061 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36388,496,425 - 88,511,045 (-)NCBIMGSCv36mm8
Celera388,450,135 - 88,464,782 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map338.82NCBI
Slc25a44
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82176,166,136 - 176,180,965 (-)NCBIGRCr8
mRatBN7.22173,868,317 - 173,883,137 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2173,868,320 - 173,883,020 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2181,012,522 - 181,027,209 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02179,034,883 - 179,049,570 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02173,634,938 - 173,649,639 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02187,772,013 - 187,786,829 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2187,774,062 - 187,786,731 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02207,174,512 - 207,189,328 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42180,512,111 - 180,526,810 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12180,464,533 - 180,476,814 (-)NCBI
Celera2167,813,048 - 167,827,747 (-)NCBICelera
Cytogenetic Map2q34NCBI
Slc25a44
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555452,347,844 - 2,364,935 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555452,347,951 - 2,364,935 (+)NCBIChiLan1.0ChiLan1.0
SLC25A44
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2193,631,670 - 93,653,209 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1193,363,568 - 93,385,182 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01131,535,399 - 131,556,750 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11135,366,043 - 135,387,643 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1135,366,049 - 135,387,643 (+)Ensemblpanpan1.1panPan2
SLC25A44
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1741,630,868 - 41,665,894 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl741,630,098 - 41,665,791 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha741,118,651 - 41,155,784 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0741,495,306 - 41,532,574 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl741,496,715 - 41,532,560 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1741,276,605 - 41,313,724 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0741,329,782 - 41,366,873 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0741,613,895 - 41,651,236 (-)NCBIUU_Cfam_GSD_1.0
Slc25a44
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505826,405,455 - 26,424,014 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365805,435,730 - 5,454,759 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365805,435,841 - 5,454,396 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A44
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl493,837,009 - 93,857,158 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1493,837,004 - 93,857,154 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24102,579,411 - 102,599,563 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A44
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1207,655,836 - 7,675,356 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl207,655,834 - 7,675,190 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660386,950,036 - 6,969,703 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a44
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248851,500,255 - 1,517,481 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248851,500,837 - 1,517,481 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SLC25A44
12 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q22(chr1:155834419-156434205)x3 copy number gain See cases [RCV000138885] Chr1:155834419..156434205 [GRCh38]
Chr1:155804210..156403997 [GRCh37]
Chr1:154070834..154670621 [NCBI36]
Chr1:1q22
uncertain significance
GRCh38/hg38 1q21.3-23.1(chr1:154566501-157624084)x3 copy number gain See cases [RCV000139902] Chr1:154566501..157624084 [GRCh38]
Chr1:154538977..157593874 [GRCh37]
Chr1:152805601..155860498 [NCBI36]
Chr1:1q21.3-23.1
pathogenic
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 copy number gain See cases [RCV000143515] Chr1:149854269..180267197 [GRCh38]
Chr1:149825831..180236332 [GRCh37]
Chr1:148092455..178502955 [NCBI36]
Chr1:1q21.2-25.2
pathogenic
Single allele inversion Pediatric metastatic thyroid tumour [RCV000585807] Chr1:154130985..156843877 [GRCh37]
Chr1:1q21.3-23.1
likely pathogenic
GRCh37/hg19 1q21.3-23.1(chr1:153751465-156660462)x3 copy number gain not provided [RCV000585385] Chr1:153751465..156660462 [GRCh37]
Chr1:1q21.3-23.1
likely pathogenic
GRCh37/hg19 1q22(chr1:156070888-156238593)x1 copy number loss See cases [RCV000599483] Chr1:156070888..156238593 [GRCh37]
Chr1:1q22
pathogenic
GRCh37/hg19 1q22(chr1:155902781-156210031)x3 copy number gain See cases [RCV000447140] Chr1:155902781..156210031 [GRCh37]
Chr1:1q22
uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1q22-23.1(chr1:155636337-158024499)x1 copy number loss not provided [RCV000684658] Chr1:155636337..158024499 [GRCh37]
Chr1:1q22-23.1
pathogenic
GRCh37/hg19 1q22-23.1(chr1:155999570-156844432)x3 copy number gain not provided [RCV000684659] Chr1:155999570..156844432 [GRCh37]
Chr1:1q22-23.1
uncertain significance
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44
pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44
pathogenic
LMNA-NTRK1 fusion fusion Congenital fibrosarcoma [RCV000754610] Chr1:156100565..156844697 [GRCh37]
Chr1:1q22-23.1
pathogenic
NC_000001.11:g.(?_156114919)_(156243162_?)del deletion Charcot-Marie-Tooth disease type 2 [RCV000823232] Chr1:156114919..156243162 [GRCh38]
Chr1:156084710..156212953 [GRCh37]
Chr1:1q22
pathogenic
GRCh37/hg19 1q22(chr1:156037369-156463980)x3 copy number gain not provided [RCV000846254] Chr1:156037369..156463980 [GRCh37]
Chr1:1q22
uncertain significance
GRCh37/hg19 1q22-23.1(chr1:155770505-156652136)x3 copy number gain not provided [RCV000848811] Chr1:155770505..156652136 [GRCh37]
Chr1:1q22-23.1
uncertain significance
NM_014655.4(SLC25A44):c.932C>T (p.Ser311Leu) single nucleotide variant Inborn genetic diseases [RCV003239446] Chr1:156210418 [GRCh38]
Chr1:156180209 [GRCh37]
Chr1:1q22
uncertain significance
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44
uncertain significance
GRCh37/hg19 1q22(chr1:155902781-156210031) copy number gain not specified [RCV002053636] Chr1:155902781..156210031 [GRCh37]
Chr1:1q22
uncertain significance
GRCh37/hg19 1q22(chr1:156034721-156240338) copy number gain not specified [RCV002053647] Chr1:156034721..156240338 [GRCh37]
Chr1:1q22
uncertain significance
NC_000001.10:g.(?_155581953)_(156851434_?)del deletion Charcot-Marie-Tooth disease type 2 [RCV001983077] Chr1:155581953..156851434 [GRCh37]
Chr1:1q22-23.1
pathogenic
NC_000001.10:g.(?_154141761)_(156851434_?)dup duplication Charcot-Marie-Tooth disease type 2 [RCV001990060] Chr1:154141761..156851434 [GRCh37]
Chr1:1q21.3-23.1
uncertain significance
NC_000001.10:g.(?_149895434)_(156851434_?)dup duplication Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001958273]|Congenital neutropenia-myelofibrosis-nephromegaly syndrome [RCV001958271]|Kostmann syndrome [RCV003120769]|MHC class II deficiency [RCV001992607] Chr1:149895434..156851434 [GRCh37]
Chr1:1q21.2-23.1
uncertain significance
GRCh37/hg19 1q22(chr1:155489474-156196407)x3 copy number gain not provided [RCV002473771] Chr1:155489474..156196407 [GRCh37]
Chr1:1q22
uncertain significance
NM_014655.4(SLC25A44):c.224G>A (p.Arg75Gln) single nucleotide variant Inborn genetic diseases [RCV002973791] Chr1:156200071 [GRCh38]
Chr1:156169862 [GRCh37]
Chr1:1q22
uncertain significance
NM_014655.4(SLC25A44):c.437T>C (p.Met146Thr) single nucleotide variant Inborn genetic diseases [RCV002804396] Chr1:156200284 [GRCh38]
Chr1:156170075 [GRCh37]
Chr1:1q22
uncertain significance
NM_014655.4(SLC25A44):c.103G>A (p.Val35Ile) single nucleotide variant Inborn genetic diseases [RCV002961272] Chr1:156199950 [GRCh38]
Chr1:156169741 [GRCh37]
Chr1:1q22
uncertain significance
NM_014655.4(SLC25A44):c.485C>T (p.Ala162Val) single nucleotide variant Inborn genetic diseases [RCV003219489] Chr1:156200332 [GRCh38]
Chr1:156170123 [GRCh37]
Chr1:1q22
uncertain significance
NM_014655.4(SLC25A44):c.131G>A (p.Arg44Gln) single nucleotide variant Inborn genetic diseases [RCV003220975] Chr1:156199978 [GRCh38]
Chr1:156169769 [GRCh37]
Chr1:1q22
uncertain significance
GRCh37/hg19 1q12-23.1(chr1:142535935-157648813)x3 copy number gain Chromosome 1q21.1 duplication syndrome [RCV003329522] Chr1:142535935..157648813 [GRCh37]
Chr1:1q12-23.1
pathogenic
NM_014655.4(SLC25A44):c.143A>G (p.Gln48Arg) single nucleotide variant Inborn genetic diseases [RCV003381361] Chr1:156199990 [GRCh38]
Chr1:156169781 [GRCh37]
Chr1:1q22
uncertain significance
NM_014655.4(SLC25A44):c.869T>C (p.Ile290Thr) single nucleotide variant Inborn genetic diseases [RCV003364297] Chr1:156210355 [GRCh38]
Chr1:156180146 [GRCh37]
Chr1:1q22
uncertain significance
GRCh37/hg19 1q22(chr1:155864518-156213257)x3 copy number gain not provided [RCV003484043] Chr1:155864518..156213257 [GRCh37]
Chr1:1q22
uncertain significance
miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR548Bhsa-miR-548b-3pMirtarbaseexternal_infoSequencingFunctional MTI (Weak)20371350

Predicted Target Of
Summary Value
Count of predictions:2577
Count of miRNA genes:1039
Interacting mature miRNAs:1254
Transcripts:ENST00000359511, ENST00000423538, ENST00000468973, ENST00000469537, ENST00000482737
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH79563  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371156,182,358 - 156,182,559UniSTSGRCh37
Build 361154,448,982 - 154,449,183RGDNCBI36
Celera1129,255,338 - 129,255,539RGD
Cytogenetic Map1q12UniSTS
Cytogenetic Map1q22UniSTS
HuRef1127,544,090 - 127,544,291UniSTS
GeneMap99-GB4 RH Map1567.02UniSTS
SHGC-84544  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371156,166,372 - 156,166,643UniSTSGRCh37
Build 361154,432,996 - 154,433,267RGDNCBI36
Celera1129,239,351 - 129,239,622RGD
Cytogenetic Map1q22UniSTS
HuRef1127,528,095 - 127,528,366UniSTS
TNG Radiation Hybrid Map170546.0UniSTS
SHGC-64332  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371156,182,279 - 156,182,462UniSTSGRCh37
Build 361154,448,903 - 154,449,086RGDNCBI36
Celera1129,255,259 - 129,255,442RGD
Cytogenetic Map1q12UniSTS
Cytogenetic Map1q22UniSTS
HuRef1127,544,011 - 127,544,194UniSTS
TNG Radiation Hybrid Map170552.0UniSTS
RH45544  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371156,167,566 - 156,167,757UniSTSGRCh37
Build 361154,434,190 - 154,434,381RGDNCBI36
Celera1129,240,545 - 129,240,736RGD
Cytogenetic Map1q22UniSTS
GeneMap99-GB4 RH Map1561.28UniSTS
A002Y27  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371156,181,156 - 156,181,288UniSTSGRCh37
Build 361154,447,780 - 154,447,912RGDNCBI36
Celera1129,254,136 - 129,254,268RGD
Cytogenetic Map1q12UniSTS
Cytogenetic Map1q22UniSTS
HuRef1127,542,888 - 127,543,020UniSTS
GeneMap99-GB4 RH Map1561.97UniSTS
D15S1477  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4q32-q35UniSTS
Cytogenetic Map5q11UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map2q31UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map1q31.3UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map3p25-p24UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map3p12UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map6p21.1-p12.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map14q11.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p22.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map15q21-q23UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map11q12UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map17qUniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p24.2UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 857 1017 1293 369 1603 347 2193 378 2514 299 1040 1457 36 1 599 1279 2 2
Low 1582 1974 433 255 348 118 2164 1819 1220 120 420 156 139 605 1509 4
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001286184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001377390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_014655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_104408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_104411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_104412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024451071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047435097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047435098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047435101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047435102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047435103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054339749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB007915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK074912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK307968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL135927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CQ782989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CQ783742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC370927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY053859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000359511   ⟹   ENSP00000352497
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1156,194,104 - 156,212,796 (+)Ensembl
RefSeq Acc Id: ENST00000423538   ⟹   ENSP00000407560
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1156,193,932 - 156,212,795 (+)Ensembl
RefSeq Acc Id: ENST00000468973
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1156,200,390 - 156,210,427 (+)Ensembl
RefSeq Acc Id: ENST00000469537
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1156,196,205 - 156,212,795 (+)Ensembl
RefSeq Acc Id: ENST00000482737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1156,199,618 - 156,200,186 (+)Ensembl
RefSeq Acc Id: ENST00000684582   ⟹   ENSP00000507428
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1156,194,103 - 156,211,446 (+)Ensembl
RefSeq Acc Id: NM_001286184   ⟹   NP_001273113
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
HuRef1127,525,446 - 127,544,319 (+)NCBI
CHM1_11157,559,693 - 157,578,555 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377385   ⟹   NP_001364314
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377386   ⟹   NP_001364315
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377387   ⟹   NP_001364316
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377388   ⟹   NP_001364317
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377389   ⟹   NP_001364318
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001377390   ⟹   NP_001364319
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NM_014655   ⟹   NP_055470
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
GRCh371156,163,728 - 156,182,587 (+)NCBI
Build 361154,430,523 - 154,449,211 (+)NCBI Archive
Celera1129,236,709 - 129,255,567 (+)RGD
HuRef1127,525,446 - 127,544,319 (+)NCBI
CHM1_11157,559,693 - 157,578,555 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NR_104408
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
HuRef1127,525,446 - 127,544,319 (+)NCBI
CHM1_11157,559,693 - 157,578,555 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NR_104411
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
HuRef1127,525,446 - 127,544,319 (+)NCBI
CHM1_11157,559,693 - 157,578,555 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: NR_104412
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
HuRef1127,525,446 - 127,544,319 (+)NCBI
CHM1_11157,559,693 - 157,578,555 (+)NCBI
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510180   ⟹   XP_011508482
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510181   ⟹   XP_011508483
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047435097   ⟹   XP_047291053
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
RefSeq Acc Id: XM_047435098   ⟹   XP_047291054
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
RefSeq Acc Id: XM_047435101   ⟹   XP_047291057
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
RefSeq Acc Id: XM_047435102   ⟹   XP_047291058
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
RefSeq Acc Id: XM_047435103   ⟹   XP_047291059
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,104 - 156,212,796 (+)NCBI
RefSeq Acc Id: XM_054339743   ⟹   XP_054195718
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
RefSeq Acc Id: XM_054339744   ⟹   XP_054195719
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
RefSeq Acc Id: XM_054339745   ⟹   XP_054195720
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
RefSeq Acc Id: XM_054339746   ⟹   XP_054195721
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
RefSeq Acc Id: XM_054339747   ⟹   XP_054195722
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
RefSeq Acc Id: XM_054339748   ⟹   XP_054195723
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
RefSeq Acc Id: XM_054339749   ⟹   XP_054195724
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01155,332,555 - 155,351,250 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001273113 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364314 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364315 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364316 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364317 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364318 (Get FASTA)   NCBI Sequence Viewer  
  NP_001364319 (Get FASTA)   NCBI Sequence Viewer  
  NP_055470 (Get FASTA)   NCBI Sequence Viewer  
  XP_011508482 (Get FASTA)   NCBI Sequence Viewer  
  XP_011508483 (Get FASTA)   NCBI Sequence Viewer  
  XP_047291053 (Get FASTA)   NCBI Sequence Viewer  
  XP_047291054 (Get FASTA)   NCBI Sequence Viewer  
  XP_047291057 (Get FASTA)   NCBI Sequence Viewer  
  XP_047291058 (Get FASTA)   NCBI Sequence Viewer  
  XP_047291059 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195718 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195719 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195720 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195721 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195722 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195723 (Get FASTA)   NCBI Sequence Viewer  
  XP_054195724 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH08843 (Get FASTA)   NCBI Sequence Viewer  
  AAH39854 (Get FASTA)   NCBI Sequence Viewer  
  BAA32291 (Get FASTA)   NCBI Sequence Viewer  
  BAC11287 (Get FASTA)   NCBI Sequence Viewer  
  BAC11347 (Get FASTA)   NCBI Sequence Viewer  
  BAG57193 (Get FASTA)   NCBI Sequence Viewer  
  BAG57735 (Get FASTA)   NCBI Sequence Viewer  
  BAG61638 (Get FASTA)   NCBI Sequence Viewer  
  CAF86209 (Get FASTA)   NCBI Sequence Viewer  
  CAF86839 (Get FASTA)   NCBI Sequence Viewer  
  EAW52991 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000352497
  ENSP00000352497.4
  ENSP00000407560
  ENSP00000407560.3
  ENSP00000507428.1
GenBank Protein Q96H78 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_055470   ⟸   NM_014655
- Peptide Label: isoform 2
- UniProtKB: O75034 (UniProtKB/Swiss-Prot),   Q96H78 (UniProtKB/Swiss-Prot),   B4DGC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273113   ⟸   NM_001286184
- Peptide Label: isoform 1
- UniProtKB: E9PGQ0 (UniProtKB/TrEMBL),   B4DGC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011508482   ⟸   XM_011510180
- Peptide Label: isoform X1
- UniProtKB: E9PGQ0 (UniProtKB/TrEMBL),   B4DGC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011508483   ⟸   XM_011510181
- Peptide Label: isoform X1
- UniProtKB: E9PGQ0 (UniProtKB/TrEMBL),   B4DGC4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001364315   ⟸   NM_001377386
- Peptide Label: isoform 2
- UniProtKB: Q96H78 (UniProtKB/Swiss-Prot),   O75034 (UniProtKB/Swiss-Prot),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001364314   ⟸   NM_001377385
- Peptide Label: isoform 1
- UniProtKB: E9PGQ0 (UniProtKB/TrEMBL),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001364317   ⟸   NM_001377388
- Peptide Label: isoform 2
- UniProtKB: Q96H78 (UniProtKB/Swiss-Prot),   O75034 (UniProtKB/Swiss-Prot),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001364316   ⟸   NM_001377387
- Peptide Label: isoform 2
- UniProtKB: Q96H78 (UniProtKB/Swiss-Prot),   O75034 (UniProtKB/Swiss-Prot),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001364319   ⟸   NM_001377390
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001364318   ⟸   NM_001377389
- Peptide Label: isoform 3
RefSeq Acc Id: ENSP00000352497   ⟸   ENST00000359511
RefSeq Acc Id: ENSP00000407560   ⟸   ENST00000423538
RefSeq Acc Id: ENSP00000507428   ⟸   ENST00000684582
RefSeq Acc Id: XP_047291053   ⟸   XM_047435097
- Peptide Label: isoform X1
- UniProtKB: E9PGQ0 (UniProtKB/TrEMBL),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047291054   ⟸   XM_047435098
- Peptide Label: isoform X2
- UniProtKB: Q96H78 (UniProtKB/Swiss-Prot),   O75034 (UniProtKB/Swiss-Prot),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047291057   ⟸   XM_047435101
- Peptide Label: isoform X2
- UniProtKB: Q96H78 (UniProtKB/Swiss-Prot),   O75034 (UniProtKB/Swiss-Prot),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047291058   ⟸   XM_047435102
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047291059   ⟸   XM_047435103
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054195720   ⟸   XM_054339745
- Peptide Label: isoform X1
- UniProtKB: E9PGQ0 (UniProtKB/TrEMBL),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054195721   ⟸   XM_054339746
- Peptide Label: isoform X2
- UniProtKB: Q96H78 (UniProtKB/Swiss-Prot),   O75034 (UniProtKB/Swiss-Prot),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054195722   ⟸   XM_054339747
- Peptide Label: isoform X2
- UniProtKB: Q96H78 (UniProtKB/Swiss-Prot),   O75034 (UniProtKB/Swiss-Prot),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054195718   ⟸   XM_054339743
- Peptide Label: isoform X1
- UniProtKB: E9PGQ0 (UniProtKB/TrEMBL),   B4DGC4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054195723   ⟸   XM_054339748
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054195724   ⟸   XM_054339749
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054195719   ⟸   XM_054339744
- Peptide Label: isoform X1
- UniProtKB: E9PGQ0 (UniProtKB/TrEMBL),   B4DGC4 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96H78-F1-model_v2 AlphaFold Q96H78 1-314 view protein structure

Promoters
RGD ID:6785854
Promoter ID:HG_KWN:5488
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000040856,   OTTHUMT00000040859,   UC009WRR.1,   UC009WRS.1,   UC009WRT.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361154,429,516 - 154,430,597 (+)MPROMDB
RGD ID:6786866
Promoter ID:HG_KWN:5489
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   K562,   Lymphoblastoid
Transcripts:OTTHUMT00000040857,   OTTHUMT00000040858
Position:
Human AssemblyChrPosition (strand)Source
Build 361154,435,326 - 154,436,647 (+)MPROMDB
RGD ID:6857554
Promoter ID:EPDNEW_H1942
Type:initiation region
Name:SLC25A44_1
Description:solute carrier family 25 member 44
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381156,194,117 - 156,194,177EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29036 AgrOrtholog
COSMIC SLC25A44 COSMIC
Ensembl Genes ENSG00000160785 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000359511 ENTREZGENE
  ENST00000359511.5 UniProtKB/Swiss-Prot
  ENST00000423538 ENTREZGENE
  ENST00000423538.6 UniProtKB/TrEMBL
  ENST00000684582.1 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000160785 GTEx
HGNC ID HGNC:29036 ENTREZGENE
Human Proteome Map SLC25A44 Human Proteome Map
InterPro Mit_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SLC25A44 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9673 UniProtKB/Swiss-Prot
NCBI Gene 9673 ENTREZGENE
OMIM 610824 OMIM
PANTHER PTHR46314 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 25 MEMBER 44 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA162403705 PharmGKB
PRINTS MITOCARRIER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A804HJB0_HUMAN UniProtKB/TrEMBL
  B4DGC4 ENTREZGENE, UniProtKB/TrEMBL
  E9PGQ0 ENTREZGENE, UniProtKB/TrEMBL
  O75034 ENTREZGENE
  Q96H78 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary O75034 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-15 SLC25A44  solute carrier family 25 member 44  SLC25A44  solute carrier family 25, member 44  Symbol and/or name change 5135510 APPROVED