OS9 (OS9 endoplasmic reticulum lectin) - Rat Genome Database

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Gene: OS9 (OS9 endoplasmic reticulum lectin) Homo sapiens
Analyze
Symbol: OS9
Name: OS9 endoplasmic reticulum lectin
RGD ID: 1605693
HGNC Page HGNC:16994
Description: Predicted to enable carbohydrate binding activity and protease binding activity. Involved in several processes, including negative regulation of retrograde protein transport, ER to cytosol; protein retention in ER lumen; and proteolysis involved in protein catabolic process. Located in endoplasmic reticulum lumen.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: amplified in osteosarcoma 9; endoplasmic reticulum lectin 2; ERLEC2; erlectin 2; OS-9; OS9, endoplasmic reticulum lectin; osteosarcoma amplified 9, endoplasmic reticulum associated protein; osteosarcoma amplified 9, endoplasmic reticulum lectin
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381257,694,132 - 57,721,557 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,693,841 - 57,728,342 (+)EnsemblGRCh38hg38GRCh38
GRCh371258,087,915 - 58,115,340 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361256,374,153 - 56,401,607 (+)NCBINCBI36Build 36hg18NCBI36
Celera1257,745,335 - 57,772,930 (+)NCBICelera
Cytogenetic Map12q13.3-q14.1NCBI
HuRef1255,124,606 - 55,152,176 (+)NCBIHuRef
CHM1_11258,055,537 - 58,083,142 (+)NCBICHM1_1
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Regulation of oxygen homeostasis by hypoxia-inducible factor 1. Semenza GL Physiology (Bethesda). 2009 Apr;24:97-106.
Additional References at PubMed
PMID:8090779   PMID:8634085   PMID:9192850   PMID:9498564   PMID:9562620   PMID:10403379   PMID:12077121   PMID:12093806   PMID:12477932   PMID:12747754   PMID:15146197   PMID:15231748  
PMID:15721254   PMID:16169070   PMID:16344560   PMID:17932042   PMID:18264092   PMID:18417469   PMID:18502753   PMID:18711132   PMID:18952287   PMID:19084021   PMID:19346256   PMID:19706418  
PMID:19914915   PMID:20546900   PMID:20549515   PMID:20936779   PMID:21118962   PMID:21172656   PMID:21404621   PMID:21454652   PMID:21559462   PMID:21857022   PMID:21873635   PMID:21917589  
PMID:21988832   PMID:22119785   PMID:22190034   PMID:22268729   PMID:23097496   PMID:23356641   PMID:23414517   PMID:23464991   PMID:23867461   PMID:23956138   PMID:24390342   PMID:24795221  
PMID:24899641   PMID:24910992   PMID:25314054   PMID:25544563   PMID:25660456   PMID:25999789   PMID:26186194   PMID:26424800   PMID:26496610   PMID:26551274   PMID:26638075   PMID:26721884  
PMID:26945068   PMID:26972000   PMID:27375898   PMID:27387505   PMID:27432908   PMID:28366632   PMID:28380382   PMID:28419469   PMID:28514442   PMID:28611215   PMID:28675297   PMID:28827405  
PMID:29496332   PMID:29599191   PMID:29706535   PMID:30631154   PMID:30833792   PMID:31056421   PMID:31527615   PMID:32353859   PMID:32409323   PMID:32423001   PMID:32437666   PMID:32513696  
PMID:32614325   PMID:32665550   PMID:33060197   PMID:33545068   PMID:33671632   PMID:33957083   PMID:33961781   PMID:34079125   PMID:34186245   PMID:34591612   PMID:34591642   PMID:34597346  
PMID:34672954   PMID:34709727   PMID:35007762   PMID:35271311   PMID:35338135   PMID:35384245   PMID:35605301   PMID:35944360   PMID:36180527   PMID:36215168   PMID:36352191   PMID:36610398  
PMID:38070861  


Genomics

Comparative Map Data
OS9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381257,694,132 - 57,721,557 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,693,841 - 57,728,342 (+)EnsemblGRCh38hg38GRCh38
GRCh371258,087,915 - 58,115,340 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361256,374,153 - 56,401,607 (+)NCBINCBI36Build 36hg18NCBI36
Celera1257,745,335 - 57,772,930 (+)NCBICelera
Cytogenetic Map12q13.3-q14.1NCBI
HuRef1255,124,606 - 55,152,176 (+)NCBIHuRef
CHM1_11258,055,537 - 58,083,142 (+)NCBICHM1_1
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBIT2T-CHM13v2.0
Os9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910126,928,880 - 126,957,029 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10126,931,519 - 126,957,000 (-)EnsemblGRCm39 Ensembl
GRCm3810127,094,259 - 127,121,160 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,095,650 - 127,121,131 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710126,531,315 - 126,558,216 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,498,599 - 126,524,074 (-)NCBIMGSCv36mm8
Celera10129,486,911 - 129,514,007 (-)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
Os9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8764,802,517 - 64,829,185 (-)NCBIGRCr8
mRatBN7.2762,915,498 - 62,957,591 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl762,915,515 - 62,943,745 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx764,806,506 - 64,833,054 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0767,008,904 - 67,035,457 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0766,809,970 - 66,836,472 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0770,378,625 - 70,407,135 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,380,311 - 70,407,177 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,556,327 - 70,584,837 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,046,802 - 67,073,355 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1767,067,533 - 67,094,085 (-)NCBI
Celera760,060,542 - 60,087,034 (-)NCBICelera
Cytogenetic Map7q22NCBI
Os9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554585,407,739 - 5,432,085 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554585,407,709 - 5,432,646 (+)NCBIChiLan1.0ChiLan1.0
OS9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21036,619,441 - 36,646,957 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11236,616,212 - 36,643,728 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01231,205,239 - 31,232,769 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11231,465,836 - 31,493,076 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1231,463,716 - 31,493,076 (-)Ensemblpanpan1.1panPan2
OS9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1101,757,070 - 1,787,822 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl101,757,103 - 1,787,203 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha101,820,251 - 1,851,006 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0101,766,439 - 1,797,192 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl101,766,407 - 1,797,188 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1101,744,195 - 1,774,942 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0101,986,092 - 2,017,042 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0102,111,143 - 2,141,905 (+)NCBIUU_Cfam_GSD_1.0
Os9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494557,010,035 - 57,037,803 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366461,832,015 - 1,859,576 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366461,832,434 - 1,860,200 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OS9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl522,957,875 - 23,004,458 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1522,957,903 - 23,004,464 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
OS9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11153,606,916 - 53,635,152 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1153,607,008 - 53,635,793 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037192,327,156 - 192,355,401 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Os9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480210,222,259 - 10,252,039 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480210,221,633 - 10,252,008 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in OS9
49 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12q13.3-14.2(chr12:57013355-63042498)x1 copy number loss See cases [RCV000052813] Chr12:57013355..63042498 [GRCh38]
Chr12:57407139..63436278 [GRCh37]
Chr12:55693406..61722545 [NCBI36]
Chr12:12q13.3-14.2
pathogenic
GRCh38/hg38 12q13.3-14.1(chr12:57041158-60273934)x1 copy number loss See cases [RCV000052814] Chr12:57041158..60273934 [GRCh38]
Chr12:57434942..60667715 [GRCh37]
Chr12:55721209..58953982 [NCBI36]
Chr12:12q13.3-14.1
pathogenic
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 copy number gain See cases [RCV000258805] Chr12:1..133851895 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic|likely pathogenic
NM_006812.4(OS9):c.1264GATGAGGATGAA[1] (p.418DE[4]) microsatellite not provided [RCV000598991] Chr12:57718275..57718286 [GRCh38]
Chr12:58112058..58112069 [GRCh37]
Chr12:12q14.1
uncertain significance
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 copy number gain See cases [RCV000510482] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) copy number gain See cases [RCV000511643] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_006812.4(OS9):c.677G>A (p.Arg226Gln) single nucleotide variant Inborn genetic diseases [RCV003302632] Chr12:57715857 [GRCh38]
Chr12:58109640 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.667C>T (p.Arg223Cys) single nucleotide variant Inborn genetic diseases [RCV003255569] Chr12:57715847 [GRCh38]
Chr12:58109630 [GRCh37]
Chr12:12q14.1
uncertain significance
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 copy number gain not provided [RCV000750246] Chr12:191619..133777645 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 copy number gain not provided [RCV000750253] Chr12:621220..133779118 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
NM_006812.4(OS9):c.1361C>T (p.Ser454Leu) single nucleotide variant not provided [RCV000947467] Chr12:57718372 [GRCh38]
Chr12:58112155 [GRCh37]
Chr12:12q14.1
benign
NM_006812.4(OS9):c.141G>A (p.Pro47=) single nucleotide variant not provided [RCV000962268] Chr12:57694302 [GRCh38]
Chr12:58088085 [GRCh37]
Chr12:12q13.3
benign
NM_006812.4(OS9):c.481-7T>C single nucleotide variant not provided [RCV000957092] Chr12:57696268 [GRCh38]
Chr12:58090051 [GRCh37]
Chr12:12q13.3
benign
GRCh37/hg19 12q13.3-14.1(chr12:57582163-59031979)x1 copy number loss not provided [RCV001006506] Chr12:57582163..59031979 [GRCh37]
Chr12:12q13.3-14.1
likely pathogenic
GRCh37/hg19 12q13.2-14.1(chr12:55552371-62126304)x3 copy number gain not provided [RCV001006505] Chr12:55552371..62126304 [GRCh37]
Chr12:12q13.2-14.1
pathogenic
NM_006812.4(OS9):c.1395A>G (p.Glu465=) single nucleotide variant not provided [RCV001617798] Chr12:57718406 [GRCh38]
Chr12:58112189 [GRCh37]
Chr12:12q14.1
benign
NC_000012.11:g.(?_57881874)_(58190366_?)dup duplication not provided [RCV001916382] Chr12:57881874..58190366 [GRCh37]
Chr12:12q13.3-14.1
uncertain significance
NC_000012.11:g.(?_57534470)_(58190366_?)dup duplication Familial melanoma [RCV003119257] Chr12:57534470..58190366 [GRCh37]
Chr12:12q13.3-14.1
uncertain significance
GRCh37/hg19 12q13.3-14.1(chr12:57631073-58236597)x1 copy number loss not provided [RCV002474565] Chr12:57631073..58236597 [GRCh37]
Chr12:12q13.3-14.1
likely pathogenic
NM_006812.4(OS9):c.896C>T (p.Ala299Val) single nucleotide variant Inborn genetic diseases [RCV002774158] Chr12:57716415 [GRCh38]
Chr12:58110198 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.605T>C (p.Ile202Thr) single nucleotide variant Inborn genetic diseases [RCV002771935] Chr12:57715785 [GRCh38]
Chr12:58109568 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1149A>G (p.Ile383Met) single nucleotide variant Inborn genetic diseases [RCV002774588] Chr12:57718160 [GRCh38]
Chr12:58111943 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.835C>G (p.Leu279Val) single nucleotide variant Inborn genetic diseases [RCV002997236] Chr12:57716136 [GRCh38]
Chr12:58109919 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.598G>A (p.Ala200Thr) single nucleotide variant Inborn genetic diseases [RCV002734596] Chr12:57715778 [GRCh38]
Chr12:58109561 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1910G>A (p.Arg637His) single nucleotide variant Inborn genetic diseases [RCV002688780] Chr12:57720815 [GRCh38]
Chr12:58114598 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.540G>C (p.Lys180Asn) single nucleotide variant Inborn genetic diseases [RCV002901751] Chr12:57696334 [GRCh38]
Chr12:58090117 [GRCh37]
Chr12:12q13.3
uncertain significance
NM_006812.4(OS9):c.995A>G (p.Glu332Gly) single nucleotide variant Inborn genetic diseases [RCV002969450] Chr12:57716694 [GRCh38]
Chr12:58110477 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1862T>C (p.Ile621Thr) single nucleotide variant Inborn genetic diseases [RCV002973918] Chr12:57720502 [GRCh38]
Chr12:58114285 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.602G>T (p.Gly201Val) single nucleotide variant Inborn genetic diseases [RCV002997336] Chr12:57715782 [GRCh38]
Chr12:58109565 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.218G>A (p.Cys73Tyr) single nucleotide variant Inborn genetic diseases [RCV002739992] Chr12:57694805 [GRCh38]
Chr12:58088588 [GRCh37]
Chr12:12q13.3
uncertain significance
NM_006812.4(OS9):c.1790G>A (p.Arg597His) single nucleotide variant Inborn genetic diseases [RCV002694391] Chr12:57720430 [GRCh38]
Chr12:58114213 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1532A>G (p.Glu511Gly) single nucleotide variant Inborn genetic diseases [RCV002977656] Chr12:57719114 [GRCh38]
Chr12:58112897 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.560C>T (p.Pro187Leu) single nucleotide variant Inborn genetic diseases [RCV002798399] Chr12:57696354 [GRCh38]
Chr12:58090137 [GRCh37]
Chr12:12q13.3
uncertain significance
NM_006812.4(OS9):c.902C>T (p.Pro301Leu) single nucleotide variant Inborn genetic diseases [RCV002799911] Chr12:57716421 [GRCh38]
Chr12:58110204 [GRCh37]
Chr12:12q14.1
likely benign
NM_006812.4(OS9):c.1834G>A (p.Asp612Asn) single nucleotide variant Inborn genetic diseases [RCV002849948] Chr12:57720474 [GRCh38]
Chr12:58114257 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1646G>A (p.Arg549His) single nucleotide variant Inborn genetic diseases [RCV002956320] Chr12:57720144 [GRCh38]
Chr12:58113927 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1614G>C (p.Glu538Asp) single nucleotide variant Inborn genetic diseases [RCV002874385] Chr12:57720112 [GRCh38]
Chr12:58113895 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1621G>A (p.Val541Ile) single nucleotide variant Inborn genetic diseases [RCV002892009] Chr12:57720119 [GRCh38]
Chr12:58113902 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.431A>G (p.Tyr144Cys) single nucleotide variant Inborn genetic diseases [RCV002769516] Chr12:57695989 [GRCh38]
Chr12:58089772 [GRCh37]
Chr12:12q13.3
uncertain significance
NM_006812.4(OS9):c.998A>C (p.Gln333Pro) single nucleotide variant Inborn genetic diseases [RCV002961612] Chr12:57716697 [GRCh38]
Chr12:58110480 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1615C>A (p.His539Asn) single nucleotide variant Inborn genetic diseases [RCV002965816] Chr12:57720113 [GRCh38]
Chr12:58113896 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1269G>C (p.Glu423Asp) single nucleotide variant Inborn genetic diseases [RCV002677728] Chr12:57718280 [GRCh38]
Chr12:58112063 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1225C>T (p.Arg409Trp) single nucleotide variant Inborn genetic diseases [RCV002656247] Chr12:57718236 [GRCh38]
Chr12:58112019 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1648C>G (p.Leu550Val) single nucleotide variant Inborn genetic diseases [RCV002723150] Chr12:57720146 [GRCh38]
Chr12:58113929 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1946G>A (p.Arg649Gln) single nucleotide variant Inborn genetic diseases [RCV003207051] Chr12:57720851 [GRCh38]
Chr12:58114634 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1288C>G (p.Arg430Gly) single nucleotide variant Inborn genetic diseases [RCV003208344] Chr12:57718299 [GRCh38]
Chr12:58112082 [GRCh37]
Chr12:12q14.1
uncertain significance
GRCh37/hg19 12q13.3-14.1(chr12:57064059-59314016)x1 copy number loss not provided [RCV003222783] Chr12:57064059..59314016 [GRCh37]
Chr12:12q13.3-14.1
likely pathogenic
NM_006812.4(OS9):c.1457G>A (p.Arg486Gln) single nucleotide variant Inborn genetic diseases [RCV003201510] Chr12:57719039 [GRCh38]
Chr12:58112822 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1583C>T (p.Pro528Leu) single nucleotide variant Inborn genetic diseases [RCV003179479] Chr12:57719165 [GRCh38]
Chr12:58112948 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.1652G>T (p.Gly551Val) single nucleotide variant Inborn genetic diseases [RCV003309364] Chr12:57720150 [GRCh38]
Chr12:58113933 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.753G>C (p.Gln251His) single nucleotide variant Inborn genetic diseases [RCV003376313] Chr12:57715933 [GRCh38]
Chr12:58109716 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.673C>A (p.Pro225Thr) single nucleotide variant Inborn genetic diseases [RCV003374407] Chr12:57715853 [GRCh38]
Chr12:58109636 [GRCh37]
Chr12:12q14.1
uncertain significance
NM_006812.4(OS9):c.43C>G (p.Leu15Val) single nucleotide variant not provided [RCV003390273] Chr12:57694204 [GRCh38]
Chr12:58087987 [GRCh37]
Chr12:12q13.3
uncertain significance
NM_006812.4(OS9):c.621C>T (p.Ile207=) single nucleotide variant not provided [RCV003391936] Chr12:57715801 [GRCh38]
Chr12:58109584 [GRCh37]
Chr12:12q14.1
likely benign
NM_006812.4(OS9):c.744T>G (p.Pro248=) single nucleotide variant not provided [RCV003391937] Chr12:57715924 [GRCh38]
Chr12:58109707 [GRCh37]
Chr12:12q14.1
likely benign
NM_006812.4(OS9):c.308G>C (p.Ser103Thr) single nucleotide variant not provided [RCV003391935] Chr12:57694895 [GRCh38]
Chr12:58088678 [GRCh37]
Chr12:12q13.3
uncertain significance
NM_006812.4(OS9):c.993+5G>A single nucleotide variant Hereditary cancer [RCV003492893] Chr12:57716517 [GRCh38]
Chr12:58110300 [GRCh37]
Chr12:12q14.1
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:6582
Count of miRNA genes:1053
Interacting mature miRNAs:1346
Transcripts:ENST00000257966, ENST00000315970, ENST00000389142, ENST00000389146, ENST00000413095, ENST00000435406, ENST00000439210, ENST00000546916, ENST00000547079, ENST00000549307, ENST00000549897, ENST00000550202, ENST00000550372, ENST00000550438, ENST00000550699, ENST00000550793, ENST00000550848, ENST00000551035, ENST00000551285, ENST00000552285, ENST00000552423, ENST00000552787, ENST00000553208
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D9S2056  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371258,115,088 - 58,115,293UniSTSGRCh37
Build 361256,401,355 - 56,401,560RGDNCBI36
Celera1257,772,678 - 57,772,883RGD
Cytogenetic Map12q13UniSTS
HuRef1255,151,924 - 55,152,129UniSTS
Stanford-G3 RH Map122369.0UniSTS
NCBI RH Map12462.0UniSTS
GeneMap99-G3 RH Map122315.0UniSTS
MARC_11519-11520:1001089863:1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371258,112,160 - 58,112,912UniSTSGRCh37
Celera1257,769,750 - 57,770,502UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 2 7 2
Medium 2439 2975 1725 624 1950 465 4357 2180 3691 417 1460 1610 175 1 1204 2788 6 2
Low 16 1 1 15 36 2 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001017956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001017957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001017958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001261420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001261421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001261422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001261423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054370840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB002805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB002806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC025165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK130733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL137691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU132426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ954079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN335053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR456791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF036505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U09408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U41635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U81031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000257966   ⟹   ENSP00000257966
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,555 (+)Ensembl
RefSeq Acc Id: ENST00000315970   ⟹   ENSP00000318165
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,132 - 57,721,557 (+)Ensembl
RefSeq Acc Id: ENST00000389142   ⟹   ENSP00000373794
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,557 (+)Ensembl
RefSeq Acc Id: ENST00000389146   ⟹   ENSP00000373798
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,549 (+)Ensembl
RefSeq Acc Id: ENST00000413095   ⟹   ENSP00000413112
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,145 - 57,721,331 (+)Ensembl
RefSeq Acc Id: ENST00000435406   ⟹   ENSP00000389632
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,145 - 57,721,555 (+)Ensembl
RefSeq Acc Id: ENST00000439210   ⟹   ENSP00000407360
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,143 - 57,721,219 (+)Ensembl
RefSeq Acc Id: ENST00000546916
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,546 (+)Ensembl
RefSeq Acc Id: ENST00000547079   ⟹   ENSP00000447031
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,137 - 57,719,061 (+)Ensembl
RefSeq Acc Id: ENST00000549307
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,695,496 - 57,721,557 (+)Ensembl
RefSeq Acc Id: ENST00000549897
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,023 - 57,721,423 (+)Ensembl
RefSeq Acc Id: ENST00000550202
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,546 (+)Ensembl
RefSeq Acc Id: ENST00000550372   ⟹   ENSP00000447719
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,146 - 57,715,847 (+)Ensembl
RefSeq Acc Id: ENST00000550438
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,715,706 - 57,718,168 (+)Ensembl
RefSeq Acc Id: ENST00000550699
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,546 (+)Ensembl
RefSeq Acc Id: ENST00000550793
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,154 - 57,695,996 (+)Ensembl
RefSeq Acc Id: ENST00000550848   ⟹   ENSP00000448478
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,132 - 57,696,278 (+)Ensembl
RefSeq Acc Id: ENST00000551035   ⟹   ENSP00000447866
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,145 - 57,721,395 (+)Ensembl
RefSeq Acc Id: ENST00000551285   ⟹   ENSP00000449789
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,143 - 57,696,078 (+)Ensembl
RefSeq Acc Id: ENST00000552285   ⟹   ENSP00000450010
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,551 (+)Ensembl
RefSeq Acc Id: ENST00000552423   ⟹   ENSP00000447163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,121 - 57,721,551 (+)Ensembl
RefSeq Acc Id: ENST00000552787   ⟹   ENSP00000447451
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,139 - 57,716,181 (+)Ensembl
RefSeq Acc Id: ENST00000553208
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,094 - 57,721,551 (+)Ensembl
RefSeq Acc Id: ENST00000700656   ⟹   ENSP00000515125
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,546 (+)Ensembl
RefSeq Acc Id: ENST00000700657   ⟹   ENSP00000515126
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,546 (+)Ensembl
RefSeq Acc Id: ENST00000700658   ⟹   ENSP00000515127
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,546 (+)Ensembl
RefSeq Acc Id: ENST00000700659   ⟹   ENSP00000515128
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,546 (+)Ensembl
RefSeq Acc Id: ENST00000700660   ⟹   ENSP00000515129
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,546 (+)Ensembl
RefSeq Acc Id: ENST00000700661   ⟹   ENSP00000515130
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,549 (+)Ensembl
RefSeq Acc Id: ENST00000700662   ⟹   ENSP00000515131
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,549 (+)Ensembl
RefSeq Acc Id: ENST00000700663   ⟹   ENSP00000515132
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,549 (+)Ensembl
RefSeq Acc Id: ENST00000700664   ⟹   ENSP00000515133
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,551 (+)Ensembl
RefSeq Acc Id: ENST00000700665   ⟹   ENSP00000515134
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,693,841 - 57,721,551 (+)Ensembl
RefSeq Acc Id: ENST00000700666
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,094 - 57,702,427 (+)Ensembl
RefSeq Acc Id: ENST00000700667   ⟹   ENSP00000515135
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,150 - 57,721,551 (+)Ensembl
RefSeq Acc Id: ENST00000700668   ⟹   ENSP00000515136
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,694,340 - 57,721,551 (+)Ensembl
RefSeq Acc Id: ENST00000700670   ⟹   ENSP00000515138
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1257,719,093 - 57,728,342 (+)Ensembl
RefSeq Acc Id: NM_001017956   ⟹   NP_001017956
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
GRCh371258,087,738 - 58,115,340 (+)ENTREZGENE
Build 361256,374,153 - 56,401,607 (+)NCBI Archive
HuRef1255,124,606 - 55,152,176 (+)ENTREZGENE
CHM1_11258,055,537 - 58,083,142 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001017957   ⟹   NP_001017957
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
GRCh371258,087,738 - 58,115,340 (+)ENTREZGENE
Build 361256,374,153 - 56,401,607 (+)NCBI Archive
HuRef1255,124,606 - 55,152,176 (+)ENTREZGENE
CHM1_11258,055,537 - 58,083,142 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001017958   ⟹   NP_001017958
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
GRCh371258,087,738 - 58,115,340 (+)ENTREZGENE
Build 361256,374,153 - 56,401,607 (+)NCBI Archive
HuRef1255,124,606 - 55,152,176 (+)ENTREZGENE
CHM1_11258,055,537 - 58,083,142 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001261420   ⟹   NP_001248349
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
GRCh371258,087,738 - 58,115,340 (+)NCBI
HuRef1255,124,606 - 55,152,176 (+)NCBI
CHM1_11258,055,537 - 58,083,142 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001261421   ⟹   NP_001248350
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
GRCh371258,087,738 - 58,115,340 (+)NCBI
HuRef1255,124,606 - 55,152,176 (+)NCBI
CHM1_11258,055,537 - 58,083,142 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001261422   ⟹   NP_001248351
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
GRCh371258,087,738 - 58,115,340 (+)NCBI
HuRef1255,124,606 - 55,152,176 (+)NCBI
CHM1_11258,055,537 - 58,083,142 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001261423   ⟹   NP_001248352
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
GRCh371258,087,738 - 58,115,340 (+)NCBI
HuRef1255,124,606 - 55,152,176 (+)NCBI
CHM1_11258,055,537 - 58,083,142 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001410978   ⟹   NP_001397907
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
RefSeq Acc Id: NM_001410979   ⟹   NP_001397908
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
RefSeq Acc Id: NM_001410980   ⟹   NP_001397909
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
RefSeq Acc Id: NM_006812   ⟹   NP_006803
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,721,557 (+)NCBI
GRCh371258,087,738 - 58,115,340 (+)ENTREZGENE
Build 361256,374,153 - 56,401,607 (+)NCBI Archive
HuRef1255,124,606 - 55,152,176 (+)ENTREZGENE
CHM1_11258,055,537 - 58,083,142 (+)NCBI
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Sequence:
RefSeq Acc Id: XM_054370840   ⟹   XP_054226815
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01257,662,503 - 57,689,908 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001017956 (Get FASTA)   NCBI Sequence Viewer  
  NP_001017957 (Get FASTA)   NCBI Sequence Viewer  
  NP_001017958 (Get FASTA)   NCBI Sequence Viewer  
  NP_001248349 (Get FASTA)   NCBI Sequence Viewer  
  NP_001248350 (Get FASTA)   NCBI Sequence Viewer  
  NP_001248351 (Get FASTA)   NCBI Sequence Viewer  
  NP_001248352 (Get FASTA)   NCBI Sequence Viewer  
  NP_001397907 (Get FASTA)   NCBI Sequence Viewer  
  NP_001397908 (Get FASTA)   NCBI Sequence Viewer  
  NP_001397909 (Get FASTA)   NCBI Sequence Viewer  
  NP_006803 (Get FASTA)   NCBI Sequence Viewer  
  XP_054226815 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB06495 (Get FASTA)   NCBI Sequence Viewer  
  AAC39523 (Get FASTA)   NCBI Sequence Viewer  
  AAH00532 (Get FASTA)   NCBI Sequence Viewer  
  AAH06506 (Get FASTA)   NCBI Sequence Viewer  
  AAH07254 (Get FASTA)   NCBI Sequence Viewer  
  AAH23513 (Get FASTA)   NCBI Sequence Viewer  
  ABO65091 (Get FASTA)   NCBI Sequence Viewer  
  BAA24362 (Get FASTA)   NCBI Sequence Viewer  
  BAA24363 (Get FASTA)   NCBI Sequence Viewer  
  BAF84063 (Get FASTA)   NCBI Sequence Viewer  
  BAG56939 (Get FASTA)   NCBI Sequence Viewer  
  BAG57972 (Get FASTA)   NCBI Sequence Viewer  
  BAG59349 (Get FASTA)   NCBI Sequence Viewer  
  BAG60733 (Get FASTA)   NCBI Sequence Viewer  
  BAG64798 (Get FASTA)   NCBI Sequence Viewer  
  BAG65333 (Get FASTA)   NCBI Sequence Viewer  
  BAH13933 (Get FASTA)   NCBI Sequence Viewer  
  CAG33072 (Get FASTA)   NCBI Sequence Viewer  
  EAW97044 (Get FASTA)   NCBI Sequence Viewer  
  EAW97045 (Get FASTA)   NCBI Sequence Viewer  
  EAW97046 (Get FASTA)   NCBI Sequence Viewer  
  EAW97047 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000257966
  ENSP00000257966.8
  ENSP00000318165
  ENSP00000318165.7
  ENSP00000373794
  ENSP00000373794.5
  ENSP00000373798
  ENSP00000373798.6
  ENSP00000389632
  ENSP00000389632.2
  ENSP00000407360
  ENSP00000407360.2
  ENSP00000413112.2
  ENSP00000447031.1
  ENSP00000447163.1
  ENSP00000447451.1
  ENSP00000447719.1
  ENSP00000447866
  ENSP00000447866.1
  ENSP00000448478.1
  ENSP00000449789.1
  ENSP00000450010
  ENSP00000450010.1
  ENSP00000515125.1
  ENSP00000515126.1
  ENSP00000515127.1
  ENSP00000515128
  ENSP00000515128.1
  ENSP00000515129.1
  ENSP00000515130
  ENSP00000515130.1
  ENSP00000515131.1
  ENSP00000515132.1
  ENSP00000515133.1
  ENSP00000515134
  ENSP00000515134.1
  ENSP00000515135.1
  ENSP00000515136.1
  ENSP00000515138.1
GenBank Protein Q13438 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_006803   ⟸   NM_006812
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8IZ58 (UniProtKB/Swiss-Prot),   Q6IBL2 (UniProtKB/Swiss-Prot),   O00579 (UniProtKB/Swiss-Prot),   G3XA88 (UniProtKB/Swiss-Prot),   F8VUH2 (UniProtKB/Swiss-Prot),   E7EW91 (UniProtKB/Swiss-Prot),   E7ENT8 (UniProtKB/Swiss-Prot),   B4E1I6 (UniProtKB/Swiss-Prot),   B4DPX1 (UniProtKB/Swiss-Prot),   B4DE28 (UniProtKB/Swiss-Prot),   A8K5Q9 (UniProtKB/Swiss-Prot),   A6NLB2 (UniProtKB/Swiss-Prot),   A6NFR7 (UniProtKB/Swiss-Prot),   A6NDD1 (UniProtKB/Swiss-Prot),   Q9BW99 (UniProtKB/Swiss-Prot),   Q13438 (UniProtKB/Swiss-Prot),   A0A8V8TQI4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001017956   ⟸   NM_001017956
- Peptide Label: isoform 2 precursor
- UniProtKB: A0A8V8TRD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001017958   ⟸   NM_001017958
- Peptide Label: isoform 4 precursor
- UniProtKB: A0A8V8TQI4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001017957   ⟸   NM_001017957
- Peptide Label: isoform 3 precursor
- UniProtKB: A0A8V8TRD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001248349   ⟸   NM_001261420
- Peptide Label: isoform 5 precursor
- UniProtKB: A0A8V8TRD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001248350   ⟸   NM_001261421
- Peptide Label: isoform 6 precursor
- UniProtKB: A0A8V8TRD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001248351   ⟸   NM_001261422
- Peptide Label: isoform 7 precursor
- UniProtKB: A0A8V8TRD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001248352   ⟸   NM_001261423
- Peptide Label: isoform 8 precursor
- UniProtKB: A0A8V8TRD7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000407360   ⟸   ENST00000439210
RefSeq Acc Id: ENSP00000413112   ⟸   ENST00000413095
RefSeq Acc Id: ENSP00000373794   ⟸   ENST00000389142
RefSeq Acc Id: ENSP00000373798   ⟸   ENST00000389146
RefSeq Acc Id: ENSP00000257966   ⟸   ENST00000257966
RefSeq Acc Id: ENSP00000447031   ⟸   ENST00000547079
RefSeq Acc Id: ENSP00000448478   ⟸   ENST00000550848
RefSeq Acc Id: ENSP00000447719   ⟸   ENST00000550372
RefSeq Acc Id: ENSP00000447866   ⟸   ENST00000551035
RefSeq Acc Id: ENSP00000318165   ⟸   ENST00000315970
RefSeq Acc Id: ENSP00000449789   ⟸   ENST00000551285
RefSeq Acc Id: ENSP00000447163   ⟸   ENST00000552423
RefSeq Acc Id: ENSP00000450010   ⟸   ENST00000552285
RefSeq Acc Id: ENSP00000447451   ⟸   ENST00000552787
RefSeq Acc Id: ENSP00000389632   ⟸   ENST00000435406
RefSeq Acc Id: ENSP00000515133   ⟸   ENST00000700664
RefSeq Acc Id: ENSP00000515125   ⟸   ENST00000700656
RefSeq Acc Id: ENSP00000515127   ⟸   ENST00000700658
RefSeq Acc Id: ENSP00000515136   ⟸   ENST00000700668
RefSeq Acc Id: ENSP00000515129   ⟸   ENST00000700660
RefSeq Acc Id: ENSP00000515132   ⟸   ENST00000700663
RefSeq Acc Id: ENSP00000515126   ⟸   ENST00000700657
RefSeq Acc Id: ENSP00000515135   ⟸   ENST00000700667
RefSeq Acc Id: ENSP00000515131   ⟸   ENST00000700662
RefSeq Acc Id: ENSP00000515130   ⟸   ENST00000700661
RefSeq Acc Id: ENSP00000515138   ⟸   ENST00000700670
RefSeq Acc Id: ENSP00000515128   ⟸   ENST00000700659
RefSeq Acc Id: ENSP00000515134   ⟸   ENST00000700665
RefSeq Acc Id: NP_001397909   ⟸   NM_001410980
- Peptide Label: isoform 11 precursor
- UniProtKB: A0A8V8TQI8 (UniProtKB/TrEMBL),   A0A8V8TRE0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001397907   ⟸   NM_001410978
- Peptide Label: isoform 9 precursor
- UniProtKB: A0A8V8TR34 (UniProtKB/TrEMBL),   A0A8V8TRE0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001397908   ⟸   NM_001410979
- Peptide Label: isoform 10 precursor
- UniProtKB: A0A8V8TPZ4 (UniProtKB/TrEMBL),   A0A8V8TRD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054226815   ⟸   XM_054370840
- Peptide Label: isoform X1
- UniProtKB: B7Z8E7 (UniProtKB/TrEMBL)
Protein Domains
MRH   Protein OS9-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q13438-F1-model_v2 AlphaFold Q13438 1-667 view protein structure

Promoters
RGD ID:6790338
Promoter ID:HG_KWN:15997
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:UC001SPJ.1,   UC001SPK.1,   UC001SPL.1,   UC001SPM.1,   UC001SPN.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361256,374,034 - 56,374,534 (+)MPROMDB
RGD ID:6851198
Promoter ID:EP73395
Type:multiple initiation site
Name:HS_OS
Description:Amplified in osteosarcoma.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:NEDO full length human cDNA sequencing project.; Oligo-capping
Position:
Human AssemblyChrPosition (strand)Source
Build 361256,374,193 - 56,374,253EPD
RGD ID:7224591
Promoter ID:EPDNEW_H18040
Type:initiation region
Name:OS9_1
Description:OS9, endoplasmic reticulum lectin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381257,694,132 - 57,694,192EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:16994 AgrOrtholog
COSMIC OS9 COSMIC
Ensembl Genes ENSG00000135506 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000257966 ENTREZGENE
  ENST00000257966.13 UniProtKB/Swiss-Prot
  ENST00000315970 ENTREZGENE
  ENST00000315970.12 UniProtKB/Swiss-Prot
  ENST00000389142 ENTREZGENE
  ENST00000389142.10 UniProtKB/Swiss-Prot
  ENST00000389146 ENTREZGENE
  ENST00000389146.11 UniProtKB/Swiss-Prot
  ENST00000413095.6 UniProtKB/TrEMBL
  ENST00000435406 ENTREZGENE
  ENST00000435406.6 UniProtKB/Swiss-Prot
  ENST00000439210 ENTREZGENE
  ENST00000439210.6 UniProtKB/Swiss-Prot
  ENST00000547079.5 UniProtKB/TrEMBL
  ENST00000550372.5 UniProtKB/TrEMBL
  ENST00000550848.5 UniProtKB/TrEMBL
  ENST00000551035 ENTREZGENE
  ENST00000551035.5 UniProtKB/Swiss-Prot
  ENST00000551285.5 UniProtKB/TrEMBL
  ENST00000552285 ENTREZGENE
  ENST00000552285.6 UniProtKB/Swiss-Prot
  ENST00000552423.2 UniProtKB/TrEMBL
  ENST00000552787.5 UniProtKB/TrEMBL
  ENST00000700656.1 UniProtKB/TrEMBL
  ENST00000700657.1 UniProtKB/TrEMBL
  ENST00000700658.1 UniProtKB/TrEMBL
  ENST00000700659 ENTREZGENE
  ENST00000700659.1 UniProtKB/TrEMBL
  ENST00000700660.1 UniProtKB/TrEMBL
  ENST00000700661 ENTREZGENE
  ENST00000700661.1 UniProtKB/TrEMBL
  ENST00000700662.1 UniProtKB/TrEMBL
  ENST00000700663.1 UniProtKB/TrEMBL
  ENST00000700664.1 UniProtKB/TrEMBL
  ENST00000700665 ENTREZGENE
  ENST00000700665.1 UniProtKB/TrEMBL
  ENST00000700667.1 UniProtKB/TrEMBL
  ENST00000700668.1 UniProtKB/TrEMBL
  ENST00000700670.1 UniProtKB/TrEMBL
Gene3D-CATH 2.70.130.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000135506 GTEx
HGNC ID HGNC:16994 ENTREZGENE
Human Proteome Map OS9 Human Proteome Map
InterPro Man6P_isomerase_rcpt-bd_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MRH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OS-9-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OS9-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:10956 UniProtKB/Swiss-Prot
NCBI Gene 10956 ENTREZGENE
OMIM 609677 OMIM
PANTHER PROTEIN OS-9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15414 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PRKCSH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA164724245 PharmGKB
PROSITE MRH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50911 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8V8TPZ4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8V8TPZ9_HUMAN UniProtKB/TrEMBL
  A0A8V8TQ04_HUMAN UniProtKB/TrEMBL
  A0A8V8TQI0_HUMAN UniProtKB/TrEMBL
  A0A8V8TQI2_HUMAN UniProtKB/TrEMBL
  A0A8V8TQI4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8V8TQI8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8V8TQI9_HUMAN UniProtKB/TrEMBL
  A0A8V8TR31_HUMAN UniProtKB/TrEMBL
  A0A8V8TR34 ENTREZGENE, UniProtKB/TrEMBL
  A0A8V8TR37_HUMAN UniProtKB/TrEMBL
  A0A8V8TRD7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8V8TRE0 ENTREZGENE, UniProtKB/TrEMBL
  A6NDD1 ENTREZGENE
  A6NFR7 ENTREZGENE
  A6NLB2 ENTREZGENE
  A8K5Q9 ENTREZGENE
  B4DE28 ENTREZGENE
  B4DPX1 ENTREZGENE
  B4E1I6 ENTREZGENE
  B4E321_HUMAN UniProtKB/TrEMBL
  B7Z8E7 ENTREZGENE, UniProtKB/TrEMBL
  E7ENT8 ENTREZGENE
  E7EW91 ENTREZGENE
  F8VUH2 ENTREZGENE
  F8VWQ2_HUMAN UniProtKB/TrEMBL
  F8VZI7_HUMAN UniProtKB/TrEMBL
  F8W0R2_HUMAN UniProtKB/TrEMBL
  F8W1N0_HUMAN UniProtKB/TrEMBL
  F8W1V2_HUMAN UniProtKB/TrEMBL
  G3XA88 ENTREZGENE
  O00579 ENTREZGENE
  OS9_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q6IBL2 ENTREZGENE
  Q8IZ58 ENTREZGENE
  Q9BR60_HUMAN UniProtKB/TrEMBL
  Q9BW99 ENTREZGENE
UniProt Secondary A6NDD1 UniProtKB/Swiss-Prot
  A6NFR7 UniProtKB/Swiss-Prot
  A6NLB2 UniProtKB/Swiss-Prot
  A8K5Q9 UniProtKB/Swiss-Prot
  B4DE28 UniProtKB/Swiss-Prot
  B4DPX1 UniProtKB/Swiss-Prot
  B4E1I6 UniProtKB/Swiss-Prot
  E7ENT8 UniProtKB/Swiss-Prot
  E7EW91 UniProtKB/Swiss-Prot
  E9PEV6 UniProtKB/TrEMBL
  F8VUH2 UniProtKB/Swiss-Prot
  G3XA88 UniProtKB/Swiss-Prot
  O00579 UniProtKB/Swiss-Prot
  Q6IBL2 UniProtKB/Swiss-Prot
  Q8IZ58 UniProtKB/Swiss-Prot
  Q9BW99 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-01-29 OS9  OS9 endoplasmic reticulum lectin  OS9  OS9, endoplasmic reticulum lectin  Symbol and/or name change 5135510 APPROVED
2016-05-19 OS9  OS9, endoplasmic reticulum lectin  OS9  osteosarcoma amplified 9, endoplasmic reticulum lectin  Symbol and/or name change 5135510 APPROVED