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Gene: FAM172A (family with sequence similarity 172 member A) Homo sapiens
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Symbol: FAM172A
Name: family with sequence similarity 172 member A
Description: Predicted to contribute to siRNA binding activity. Predicted to be involved in chromatin silencing by small RNA; neural crest cell development; and regulation of alternative mRNA splicing, via spliceosome. Localizes to the endoplasmic reticulum; INTERACTS WITH aflatoxin B1; aflatoxin M1; antirheumatic drug.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: C5orf21; cotranscriptional regulator FAM172A; DKFZp564D172; family with sequence similarity 172, member A; hypothetical protein LOC83989; Toupee
Orthologs:
Mus musculus (house mouse) : Fam172a (family with sequence similarity 172, member A)  MGI  Alliance
Rattus norvegicus (Norway rat) : Fam172a (family with sequence similarity 172, member A)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fam172a (family with sequence similarity 172 member A)
Pan paniscus (bonobo/pygmy chimpanzee) : FAM172A (family with sequence similarity 172 member A)
Canis lupus familiaris (dog) : FAM172A (family with sequence similarity 172 member A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fam172a (family with sequence similarity 172 member A)
Sus scrofa (pig) : FAM172A (family with sequence similarity 172 member A)
Chlorocebus sabaeus (green monkey) : FAM172A (family with sequence similarity 172 member A)
Heterocephalus glaber (naked mole-rat) : Fam172a (family with sequence similarity 172 member A)
more info ...
Related Pseudogenes: FAM172BP  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl593,617,725 - 94,111,699 (-)Ensembl
GRCh38593,615,130 - 94,111,699 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37592,953,431 - 93,447,404 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36592,979,531 - 93,436,221 (-)NCBINCBI36hg18NCBI36
Celera588,812,827 - 89,307,611 (-)NCBI
Cytogenetic Map5q15NCBI
HuRef588,126,382 - 88,620,383 (-)NCBIHuRef
CHM1_1592,386,140 - 92,880,378 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on FAM172A
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1605018
Created: 2007-04-28
Species: Homo sapiens
Last Modified: 2020-01-07
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.