VKORC1 (vitamin K epoxide reductase complex subunit 1) - Rat Genome Database

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Gene: VKORC1 (vitamin K epoxide reductase complex subunit 1) Homo sapiens
Analyze
Symbol: VKORC1
Name: vitamin K epoxide reductase complex subunit 1
RGD ID: 1604306
HGNC Page HGNC:23663
Description: Enables vitamin-K-epoxide reductase (warfarin-insensitive) activity and vitamin-K-epoxide reductase (warfarin-sensitive) activity. Involved in several processes, including blood coagulation; peptidyl-glutamic acid carboxylation; and vitamin K metabolic process. Located in endoplasmic reticulum. Is active in endoplasmic reticulum membrane. Implicated in combined deficiency of vitamin K-dependent clotting factors 2 and warfarin resistance.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: EDTP308; FLJ00289; IMAGE3455200; MGC2694; MST134; MST576; phylloquinone epoxide reductase; vitamin K dependent clotting factors deficiency 2; vitamin K epoxide reductase complex, subunit 1; vitamin K1 2,3-epoxide reductase subunit 1; vitamin K1 epoxide reductase (warfarin-sensitive); VKCFD2; VKOR
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: VKORC1P1   VKORC1P2  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381631,090,854 - 31,094,797 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1631,090,842 - 31,095,980 (-)EnsemblGRCh38hg38GRCh38
GRCh371631,102,175 - 31,106,118 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361631,009,676 - 31,013,777 (-)NCBINCBI36Build 36hg18NCBI36
Celera1629,191,224 - 29,195,328 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1628,663,874 - 28,667,978 (-)NCBIHuRef
CHM1_11632,419,476 - 32,423,596 (-)NCBICHM1_1
T2T-CHM13v2.01631,478,282 - 31,482,234 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dimethylhydrazine  (ISO)
1,4-dithiothreitol  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,3-epoxyphylloquinone  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxycoumarin  (EXP)
7-Hydroxywarfarin  (EXP)
acenocoumarol  (EXP)
acetamide  (ISO)
acetylsalicylic acid  (EXP)
acrylamide  (ISO)
arsane  (EXP)
arsenic atom  (EXP)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (EXP)
bisphenol F  (EXP,ISO)
Brodifacoum  (EXP)
Bromadiolone  (EXP,ISO)
C60 fullerene  (ISO)
cadmium dichloride  (EXP)
carbon nanotube  (ISO)
Chlorophacinone  (ISO)
chloropicrin  (EXP)
choline  (ISO)
cisplatin  (ISO)
clobetasol  (ISO)
clofibrate  (ISO)
clofibric acid  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (EXP)
Coumachlor  (EXP)
coumarin  (EXP)
coumarins  (EXP)
Coumatetralyl  (EXP,ISO)
coumestrol  (EXP)
cyclosporin A  (EXP)
dehydroacetic acid  (ISO)
dexamethasone  (EXP)
Dibutyl phosphate  (EXP)
dibutyl phthalate  (ISO)
dicoumarol  (EXP)
Difenacoum  (ISO)
Difethialone  (ISO)
dioxygen  (ISO)
disodium selenite  (EXP)
dorsomorphin  (EXP)
doxorubicin  (EXP)
elemental selenium  (EXP)
Enterolactone  (EXP)
etoposide  (ISO)
fipronil  (ISO)
fluindione  (EXP)
folic acid  (ISO)
GW 4064  (ISO)
indometacin  (EXP)
ivermectin  (EXP)
L-1,4-dithiothreitol  (ISO)
L-methionine  (ISO)
manganese atom  (EXP)
manganese(0)  (EXP)
manganese(II) chloride  (EXP)
N-ethylmaleimide  (ISO)
N-nitrosodiethylamine  (ISO)
nefazodone  (ISO)
paracetamol  (ISO)
phenindione  (EXP)
phenprocoumon  (EXP)
phylloquinone  (EXP)
pyrimidifen  (EXP)
resveratrol  (EXP)
rifampicin  (EXP)
rotenone  (EXP,ISO)
SB 431542  (EXP)
selenium atom  (EXP)
sodium arsenite  (EXP)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
triphenyl phosphate  (EXP)
valproic acid  (EXP,ISO)
vitamin E  (EXP)
vitamin K  (ISO)
vitamin K epoxide  (EXP,ISO)
warfarin  (EXP,ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Structural Modeling Insights into Human VKORC1 Phenotypes. Czogalla KJ, etal., Nutrients. 2015 Aug 14;7(8):6837-51. doi: 10.3390/nu7085313.
2. A cardiovascular phenotype in warfarin-resistant Vkorc1 mutant rats. Kohn MH, etal., Artery Res. 2008 Nov;2(4):138-147.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
8. Mutations in VKORC1 cause warfarin resistance and multiple coagulation factor deficiency type 2. Rost S, etal., Nature 2004 Feb 5;427(6974):537-41.
9. Structural and functional insights into enzymes of the vitamin K cycle. Tie JK and Stafford DW, J Thromb Haemost. 2016 Feb;14(2):236-47. doi: 10.1111/jth.13217. Epub 2016 Jan 29.
Additional References at PubMed
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PMID:38674033  


Genomics

Comparative Map Data
VKORC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381631,090,854 - 31,094,797 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1631,090,842 - 31,095,980 (-)EnsemblGRCh38hg38GRCh38
GRCh371631,102,175 - 31,106,118 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361631,009,676 - 31,013,777 (-)NCBINCBI36Build 36hg18NCBI36
Celera1629,191,224 - 29,195,328 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1628,663,874 - 28,667,978 (-)NCBIHuRef
CHM1_11632,419,476 - 32,423,596 (-)NCBICHM1_1
T2T-CHM13v2.01631,478,282 - 31,482,234 (-)NCBIT2T-CHM13v2.0
Vkorc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397127,492,235 - 127,494,833 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7127,485,399 - 127,494,626 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl7127,492,235 - 127,494,789 (-)EnsemblGRCm39 Ensembl
GRCm387127,893,063 - 127,895,658 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,886,227 - 127,895,454 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,893,063 - 127,895,617 (-)EnsemblGRCm38mm10GRCm38
MGSCv377135,036,577 - 135,039,131 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367127,684,211 - 127,686,765 (-)NCBIMGSCv36mm8
Celera7127,728,262 - 127,730,816 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.81NCBI
Vkorc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,932,969 - 191,935,490 (-)NCBIGRCr8
mRatBN7.21182,502,491 - 182,505,012 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1182,500,844 - 182,505,008 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1190,853,032 - 190,855,553 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01198,039,126 - 198,041,647 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01190,709,541 - 190,712,063 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01199,338,785 - 199,341,306 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1199,337,138 - 199,341,302 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01206,361,380 - 206,363,901 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41187,176,745 - 187,179,266 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11187,326,627 - 187,329,147 (-)NCBI
Celera1180,153,292 - 180,155,813 (-)NCBICelera
Cytogenetic Map1q37NCBI
Vkorc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554937,928,516 - 7,931,265 (-)NCBIChiLan1.0ChiLan1.0
VKORC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21834,298,329 - 34,303,550 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11639,099,732 - 39,104,570 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01623,871,756 - 23,876,599 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11631,459,556 - 31,464,617 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1631,459,560 - 31,464,897 (-)Ensemblpanpan1.1panPan2
VKORC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,140,565 - 17,142,621 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,140,633 - 17,142,547 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha618,715,931 - 18,717,978 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0617,271,459 - 17,273,505 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,271,517 - 17,273,431 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,071,856 - 17,073,902 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0616,990,716 - 16,992,762 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0617,303,101 - 17,305,147 (+)NCBIUU_Cfam_GSD_1.0
Vkorc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344125,361,540 - 125,363,993 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650113,459,022 - 13,462,174 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650113,459,400 - 13,461,864 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VKORC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,386,245 - 17,389,905 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1317,386,230 - 17,389,162 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2317,483,272 - 17,485,908 (-)NCBISscrofa10.2Sscrofa10.2susScr3
VKORC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1527,778,553 - 27,782,639 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl527,776,416 - 27,782,640 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660681,685,255 - 1,689,345 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Vkorc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478214,141,545 - 14,144,177 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478214,141,545 - 14,144,181 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in VKORC1
46 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_024006.6(VKORC1):c.292C>T (p.Arg98Trp) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV000002290] Chr16:31091334 [GRCh38]
Chr16:31102655 [GRCh37]
Chr16:16p11.2		 pathogenic
NM_024006.6(VKORC1):c.85G>T (p.Val29Leu) single nucleotide variant Warfarin response [RCV000002291] Chr16:31094645 [GRCh38]
Chr16:31105966 [GRCh37]
Chr16:16p11.2		 pathogenic
NM_024006.6(VKORC1):c.134T>C (p.Val45Ala) single nucleotide variant Warfarin response [RCV000002292] Chr16:31094596 [GRCh38]
Chr16:31105917 [GRCh37]
Chr16:16p11.2		 pathogenic
NM_024006.6(VKORC1):c.172A>G (p.Arg58Gly) single nucleotide variant Warfarin response [RCV000002293] Chr16:31094558 [GRCh38]
Chr16:31105879 [GRCh37]
Chr16:16p11.2		 pathogenic
NM_024006.6(VKORC1):c.383T>G (p.Leu128Arg) single nucleotide variant Warfarin response [RCV000002294] Chr16:31091243 [GRCh38]
Chr16:31102564 [GRCh37]
Chr16:16p11.2		 pathogenic|drug response
NM_024006.4(VKORC1):c.-1639G>A single nucleotide variant See cases [RCV003993732]|Thrombus [RCV003996074]|VKORC1-related disorder [RCV003952337]|Venous thromboembolism [RCV003150805]|Warfarin response [RCV000002295]|acenocoumarol response - Dosage [RCV003227594]|not provided [RCV000377657]|not specified [RCV000603173]|phenprocoumon response - Dosage [RCV001787364]|phenprocoumon response - Toxicity [RCV001787365]|warfarin response - Dosage [RCV003227593]|warfarin response - Efficacy [RCV003227595]|warfarin response - Toxicity [RCV001787366] Chr16:31096368 [GRCh38]
Chr16:31107689 [GRCh37]
Chr16:16p11.2		 pathogenic|benign|likely benign|drug response|protective|uncertain significance|other
NM_024006.6(VKORC1):c.106G>T (p.Asp36Tyr) single nucleotide variant Thrombus [RCV002280858]|VKORC1-related disorder [RCV003944792]|Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001115529]|Warfarin response [RCV000002296]|not provided [RCV001521062]|not specified [RCV002247238]|warfarin response - Dosage [RCV003227596] Chr16:31094624 [GRCh38]
Chr16:31105945 [GRCh37]
Chr16:16p11.2		 pathogenic|benign|likely benign|drug response|uncertain significance
NM_024006.6(VKORC1):c.174-136C>T single nucleotide variant Vitamin K-Dependent Clotting Factors [RCV000291997]|Warfarin response [RCV000054531]|acenocoumarol response - Dosage [RCV000211275]|not provided [RCV005089325]|not specified [RCV000616307]|phenprocoumon response - Dosage [RCV001787818]|warfarin response - Dosage [RCV000211147] Chr16:31093557 [GRCh38]
Chr16:31093557..31093558 [GRCh38]
Chr16:31104878 [GRCh37]
Chr16:31104878..31104879 [GRCh37]
Chr16:16p11.2		 pathogenic|benign|likely benign|drug response
NM_024006.6(VKORC1):c.173+324T>G single nucleotide variant warfarin response - Dosage [RCV000211273] Chr16:31094233 [GRCh38]
Chr16:31105554 [GRCh37]
Chr16:16p11.2		 drug response
NM_024006.5(VKORC1):c.-1639G>T single nucleotide variant warfarin response - Toxicity/ADR [RCV000211327] Chr16:31096368 [GRCh38]
Chr16:31107689 [GRCh37]
Chr16:16p11.2		 drug response
NM_024006.6(VKORC1):c.*134G>A single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV000295118]|warfarin response - Dosage [RCV000211278] Chr16:31091000 [GRCh38]
Chr16:31102321 [GRCh37]
Chr16:16p11.2		 benign|drug response
NM_024006.6(VKORC1):c.173+525C>T single nucleotide variant not provided [RCV000835202] Chr16:31094032 [GRCh38]
Chr16:31094032..31094033 [GRCh38]
Chr16:31105353 [GRCh37]
Chr16:31105353..31105354 [GRCh37]
Chr16:16p11.2		 benign|drug response
GRCh38/hg38 16p11.2-11.1(chr16:30691912-36160463)x3 copy number gain See cases [RCV000133811] Chr16:30691912..36160463 [GRCh38]
Chr16:30703233..35147508 [GRCh37]
Chr16:30610734..35005009 [NCBI36]
Chr16:16p11.2-11.1		 pathogenic
GRCh38/hg38 16p11.2(chr16:29909613-31438697)x3 copy number gain See cases [RCV000135339] Chr16:29909613..31438697 [GRCh38]
Chr16:29920934..31450018 [GRCh37]
Chr16:29828435..31357519 [NCBI36]
Chr16:16p11.2		 pathogenic
GRCh38/hg38 16p12.1-11.2(chr16:27311746-31193406)x3 copy number gain See cases [RCV000140341] Chr16:27311746..31193406 [GRCh38]
Chr16:27323067..31204727 [GRCh37]
Chr16:27230568..31112228 [NCBI36]
Chr16:16p12.1-11.2		 pathogenic
GRCh38/hg38 16p12.2-11.2(chr16:23752047-31943755)x3 copy number gain See cases [RCV000141141] Chr16:23752047..31943755 [GRCh38]
Chr16:23763368..31955076 [GRCh37]
Chr16:23670869..31862577 [NCBI36]
Chr16:16p12.2-11.2		 pathogenic
NC_000016.10:g.31096368= single nucleotide variant Warfarin response [RCV000152659] Chr16:31096368 [GRCh38]
Chr16:31107689 [GRCh37]
Chr16:16p11.2		 drug response
NG_011564.1(VKORC1):g.3639dup duplication Warfarin response [RCV000054486] Chr16:31096316..31096317 [GRCh38]
Chr16:31107637..31107638 [GRCh37]
Chr16:16p11.2		 drug response
NM_024006.6(VKORC1):c.283+124G>C single nucleotide variant not specified [RCV000610753]|warfarin response - Dosage [RCV000211369] Chr16:31093188 [GRCh38]
Chr16:31093188..31093189 [GRCh38]
Chr16:31104509 [GRCh37]
Chr16:31104509..31104510 [GRCh37]
Chr16:16p11.2		 likely benign|drug response
NM_024006.6(VKORC1):c.283+837T>C single nucleotide variant not provided [RCV000830170]|warfarin response - Dosage [RCV000211406] Chr16:31092475 [GRCh38]
Chr16:31103796 [GRCh37]
Chr16:16p11.2		 benign|drug response
GRCh37/hg19 16p11.2(chr16:30391304-31122666)x3 copy number gain Breast ductal adenocarcinoma [RCV000207028] Chr16:30391304..31122666 [GRCh37]
Chr16:16p11.2		 uncertain significance
GRCh37/hg19 16p13.3-11.2(chr16:1279324-31926800)x3 copy number gain Breast ductal adenocarcinoma [RCV000207053] Chr16:1279324..31926800 [GRCh37]
Chr16:16p13.3-11.2		 uncertain significance
NM_024006.6(VKORC1):c.36G>A (p.Arg12=) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV000346857] Chr16:31094694 [GRCh38]
Chr16:31106015 [GRCh37]
Chr16:16p11.2		 benign|likely benign
NM_024006.6(VKORC1):c.358C>T (p.Leu120=) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV000350087]|not provided [RCV004715955] Chr16:31091268 [GRCh38]
Chr16:31102589 [GRCh37]
Chr16:16p11.2		 benign|likely benign
NM_024006.5(VKORC1):c.-160G>C single nucleotide variant Vitamin K-Dependent Clotting Factors [RCV000398380] Chr16:31094889 [GRCh38]
Chr16:31106210 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.3G>A (p.Met1Ile) single nucleotide variant not provided [RCV000281566] Chr16:31094727 [GRCh38]
Chr16:31106048 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.267A>T (p.Thr89=) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV000385984] Chr16:31093328 [GRCh38]
Chr16:31104649 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.*245G>A single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV000316731] Chr16:31090889 [GRCh38]
Chr16:31102210 [GRCh37]
Chr16:16p11.2		 uncertain significance
NC_000016.10:g.31087679C>T single nucleotide variant Vitamin K-Dependent Clotting Factors [RCV000362776]|not provided [RCV004715133] Chr16:31087679 [GRCh38]
Chr16:31099000 [GRCh37]
Chr16:16p11.2		 benign
NM_024006.6(VKORC1):c.*145T>C single nucleotide variant Vitamin K-Dependent Clotting Factors [RCV000389417] Chr16:31090989 [GRCh38]
Chr16:31102310 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.*10C>G single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120144] Chr16:31091124 [GRCh38]
Chr16:31102445 [GRCh37]
Chr16:16p11.2		 uncertain significance
Single allele deletion Branched-chain keto acid dehydrogenase kinase deficiency [RCV000735205] Chr16:30554158..31536880 [GRCh37]
Chr16:16p11.2		 uncertain significance
GRCh37/hg19 16p11.2(chr16:30943854-31171177)x1 copy number loss See cases [RCV000446201] Chr16:30943854..31171177 [GRCh37]
Chr16:16p11.2		 uncertain significance
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 copy number gain See cases [RCV000446684] Chr16:69193..90274381 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p11.2(chr16:30830287-31827011)x4 copy number gain See cases [RCV000447708] Chr16:30830287..31827011 [GRCh37]
Chr16:16p11.2		 uncertain significance
GRCh37/hg19 16p11.2(chr16:28826162-29043901)x1 copy number loss See cases [RCV000448084] Chr16:28826162..29043901 [GRCh37]
Chr16:16p11.2		 likely pathogenic
NC_000016.10:g.31099660G>A single nucleotide variant warfarin response - Dosage [RCV000211249] Chr16:31099660 [GRCh38]
Chr16:31099660..31099661 [GRCh38]
Chr16:31110981 [GRCh37]
Chr16:31110981..31110982 [GRCh37]
Chr16:16p11.2		 drug response
GRCh37/hg19 16p11.2(chr16:30952806-31177641)x1 copy number loss See cases [RCV000511906] Chr16:30952806..31177641 [GRCh37]
Chr16:16p11.2		 likely pathogenic
GRCh37/hg19 16p11.2(chr16:30607048-31117069)x1 copy number loss See cases [RCV000511454] Chr16:30607048..31117069 [GRCh37]
Chr16:16p11.2		 uncertain significance
GRCh37/hg19 16p13.2-q24.3(chr16:9273328-89548493)x3 copy number gain See cases [RCV000511622] Chr16:9273328..89548493 [GRCh37]
Chr16:16p13.2-q24.3		 uncertain significance
maternal UPD(16p) complex Hemimegalencephaly [RCV000494707] Chr16:1280042..33710558 [GRCh37]
Chr16:16p13.3-11.2		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) copy number gain See cases [RCV000511296] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 copy number gain See cases [RCV000512138] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
NM_024006.6(VKORC1):c.283+837= single nucleotide variant not specified [RCV000616506] Chr16:31092475 [GRCh38]
Chr16:31103796 [GRCh37]
Chr16:16p11.2		 benign
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 copy number gain not provided [RCV000738917] Chr16:88165..90163275 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 copy number gain not provided [RCV000738918] Chr16:88165..90274695 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 copy number gain not provided [RCV000738915] Chr16:61451..90294632 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p11.2(chr16:30738551-34194635)x3 copy number gain not provided [RCV000739123] Chr16:30738551..34194635 [GRCh37]
Chr16:16p11.2		 benign
NM_024006.6(VKORC1):c.54G>T (p.Thr18=) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001115530] Chr16:31094676 [GRCh38]
Chr16:31105997 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.-45G>A single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001115532] Chr16:31094774 [GRCh38]
Chr16:31106095 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.129C>T (p.Cys43=) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120433]|not provided [RCV000973971] Chr16:31094601 [GRCh38]
Chr16:31105922 [GRCh37]
Chr16:16p11.2		 benign|likely benign
GRCh37/hg19 16p11.2(chr16:30851860-31156762)x1 copy number loss not provided [RCV000848082] Chr16:30851860..31156762 [GRCh37]
Chr16:16p11.2		 pathogenic
NM_024006.6(VKORC1):c.196G>A (p.Val66Met) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120431]|Warfarin response [RCV000853288] Chr16:31093399 [GRCh38]
Chr16:31104720 [GRCh37]
Chr16:16p11.2		 pathogenic|benign
NM_024006.6(VKORC1):c.117C>T (p.Tyr39=) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001115528]|not provided [RCV004693707] Chr16:31094613 [GRCh38]
Chr16:31105934 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.*172T>A single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120143] Chr16:31090962 [GRCh38]
Chr16:31102283 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.352G>C (p.Val118Leu) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120427] Chr16:31091274 [GRCh38]
Chr16:31102595 [GRCh37]
Chr16:16p11.2		 likely benign
NM_024006.6(VKORC1):c.203A>G (p.His68Arg) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120429] Chr16:31093392 [GRCh38]
Chr16:31104713 [GRCh37]
Chr16:16p11.2		 benign
NM_024006.6(VKORC1):c.447T>C (p.Ser149=) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120145] Chr16:31091179 [GRCh38]
Chr16:31102500 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.342C>G (p.Leu114=) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120428] Chr16:31091284 [GRCh38]
Chr16:31102605 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.202C>T (p.His68Tyr) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120430] Chr16:31093393 [GRCh38]
Chr16:31104714 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.*243G>A single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120142] Chr16:31090891 [GRCh38]
Chr16:31102212 [GRCh37]
Chr16:16p11.2		 likely benign
NM_024006.6(VKORC1):c.379G>A (p.Val127Met) single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120146] Chr16:31091247 [GRCh38]
Chr16:31102568 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.173+11G>T single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001120432] Chr16:31094546 [GRCh38]
Chr16:31105867 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.-2T>C single nucleotide variant Vitamin K-dependent clotting factors, combined deficiency of, type 2 [RCV001115531] Chr16:31094731 [GRCh38]
Chr16:31106052 [GRCh37]
Chr16:16p11.2		 uncertain significance
GRCh37/hg19 16p13.3-11.2(chr16:5805001-34230001) copy number gain Microcephaly [RCV001252948] Chr16:5805001..34230001 [GRCh37]
Chr16:16p13.3-11.2		 pathogenic
GRCh37/hg19 16p11.2(chr16:30350747-31905898)x3 copy number gain not provided [RCV001258619] Chr16:30350747..31905898 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.283+124G>A single nucleotide variant not provided [RCV001757700] Chr16:31093188 [GRCh38]
Chr16:31104509 [GRCh37]
Chr16:16p11.2		 likely benign
GRCh37/hg19 16p11.2(chr16:30943854-31171177) copy number loss not specified [RCV002052525] Chr16:30943854..31171177 [GRCh37]
Chr16:16p11.2		 likely pathogenic
NM_024006.6(VKORC1):c.40G>A (p.Ala14Thr) single nucleotide variant not specified [RCV004361448] Chr16:31094690 [GRCh38]
Chr16:31106011 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.283+460C>T single nucleotide variant VKORC1-related disorder [RCV003402489] Chr16:31092852 [GRCh38]
Chr16:31104173 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.64C>T (p.Leu22Phe) single nucleotide variant not provided [RCV003426679] Chr16:31094666 [GRCh38]
Chr16:31105987 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.36G>T (p.Arg12=) single nucleotide variant VKORC1-related disorder [RCV003399954] Chr16:31094694 [GRCh38]
Chr16:31106015 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.283+448A>G single nucleotide variant VKORC1-related disorder [RCV003909254] Chr16:31092864 [GRCh38]
Chr16:31104185 [GRCh37]
Chr16:16p11.2		 benign
NM_024006.6(VKORC1):c.174-10C>T single nucleotide variant VKORC1-related disorder [RCV003959806] Chr16:31093431 [GRCh38]
Chr16:31104752 [GRCh37]
Chr16:16p11.2		 likely benign
NM_024006.6(VKORC1):c.283+458G>A single nucleotide variant VKORC1-related disorder [RCV003942221] Chr16:31092854 [GRCh38]
Chr16:31104175 [GRCh37]
Chr16:16p11.2		 likely benign
NM_024006.6(VKORC1):c.112G>C (p.Asp38His) single nucleotide variant not specified [RCV004482560] Chr16:31094618 [GRCh38]
Chr16:31105939 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.14G>C (p.Trp5Ser) single nucleotide variant not specified [RCV004482561] Chr16:31094716 [GRCh38]
Chr16:31106037 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.182G>A (p.Arg61Lys) single nucleotide variant not specified [RCV004482562] Chr16:31093413 [GRCh38]
Chr16:31104734 [GRCh37]
Chr16:16p11.2		 uncertain significance
NC_000016.9:g.(?_28889993)_(31202759_?)del deletion Dilated Cardiomyopathy, Dominant [RCV004582801] Chr16:28889993..31202759 [GRCh37]
Chr16:16p11.2		 uncertain significance
NM_024006.6(VKORC1):c.229A>T (p.Asn77Tyr) single nucleotide variant not provided [RCV004792304] Chr16:31093366 [GRCh38]
Chr16:31104687 [GRCh37]
Chr16:16p11.2		 likely pathogenic
GRCh37/hg19 16p11.2(chr16:30907349-31334236)x1 copy number loss not provided [RCV004819387] Chr16:30907349..31334236 [GRCh37]
Chr16:16p11.2		 pathogenic
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1741
Count of miRNA genes:477
Interacting mature miRNAs:529
Transcripts:ENST00000300851, ENST00000319788, ENST00000354895, ENST00000394971, ENST00000394975, ENST00000420057, ENST00000472468, ENST00000498155
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597491032GWAS1587106_Hbody surface area QTL GWAS1587106 (human)2e-13body surface area163109423331094234Human
597042915GWAS1138989_Hbody fat distribution QTL GWAS1138989 (human)4e-15body fat distributionbody fat morphological measurement (CMO:0000089)163109318831093189Human
597046654GWAS1142728_Hbody fat distribution QTL GWAS1142728 (human)3e-15body fat distributionbody fat morphological measurement (CMO:0000089)163109318831093189Human
597455077GWAS1551151_Hserum gamma-glutamyl transferase measurement QTL GWAS1551151 (human)1e-09serum gamma-glutamyl transferase measurementserum gamma-glutamyltransferase activity level (CMO:0002241)163109403231094033Human
597489397GWAS1585471_Hsexual dimorphism measurement QTL GWAS1585471 (human)3e-14sexual dimorphism measurement163109423331094234Human
597042861GWAS1138935_Hbody fat distribution QTL GWAS1138935 (human)1e-14body fat distributionbody fat morphological measurement (CMO:0000089)163109318831093189Human

Markers in Region
D16S419  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371652,953,362 - 52,953,511UniSTSGRCh37
Build 361651,510,863 - 51,511,012RGDNCBI36
Celera1637,468,252 - 37,468,401RGD
Cytogenetic Map16q21UniSTS
Cytogenetic Map16p11.2UniSTS
HuRef1638,840,950 - 38,841,099UniSTS
Marshfield Genetic Map1667.4RGD
Marshfield Genetic Map1667.4UniSTS
Genethon Genetic Map1665.6UniSTS
deCODE Assembly Map1665.31UniSTS
GeneMap99-GB4 RH Map16347.05UniSTS
Whitehead-RH Map16232.1UniSTS
Whitehead-YAC Contig Map16 UniSTS
D16S3131  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3738,472,081 - 8,472,690UniSTSGRCh37
GRCh371626,005,238 - 26,005,476UniSTSGRCh37
Build 361625,912,739 - 25,912,977RGDNCBI36
Celera38,408,174 - 8,408,783UniSTS
Celera1624,781,645 - 24,781,883RGD
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map16p12-p11.2UniSTS
Cytogenetic Map3p26.1UniSTS
HuRef1624,097,035 - 24,097,275UniSTS
Marshfield Genetic Map1650.6UniSTS
Marshfield Genetic Map1650.6RGD
Genethon Genetic Map1649.6UniSTS
TNG Radiation Hybrid Map1614554.0UniSTS
deCODE Assembly Map1650.49UniSTS
Whitehead-YAC Contig Map16 UniSTS
RH64898  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371631,102,200 - 31,102,375UniSTSGRCh37
Build 361631,009,701 - 31,009,876RGDNCBI36
Celera1629,195,128 - 29,195,303RGD
Cytogenetic Map16p11.2UniSTS
HuRef1628,663,899 - 28,664,074UniSTS
RH69900  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371631,102,444 - 31,102,570UniSTSGRCh37
Build 361631,009,945 - 31,010,071RGDNCBI36
Celera1629,194,933 - 29,195,059RGD
Cytogenetic Map16p11.2UniSTS
HuRef1628,664,143 - 28,664,269UniSTS
G35510  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1q21UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map2p25-p24UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6pter-q22.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map11q14.2-q21UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map9p21.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31-q32UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map18p11.22-p11.21UniSTS
Cytogenetic Map5q34-q35UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic MapXp22.32UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map20q13.33UniSTS
D1S1425  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map2p23-p22UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic Map2p11.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map2p12-p11.2UniSTS
Cytogenetic Map3q11.1UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map1p21.3UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map18p11.3-p11.2UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map12p12.2-p11.2UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map7q31.1-q31.3UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map12q24.32UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map15q11-q12UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map4q31.21UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map10p15-p14UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map15q24-q25UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map6q16UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map16q24.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic MapXq21.1UniSTS
GDB:631813  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map11p12UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map5q11.2-q13.1UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map3p21.33UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map2p23.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map19qUniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map19p13.3UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_011564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001311311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_024006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_206824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC135050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF176924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK125618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK289790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK312005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY423044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY466113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY521634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY587020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI822140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM663008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD249837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN484751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS811288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB064454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU927398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU198914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GU198915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JQ363929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JX000225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JX000226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JX000227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JX000228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KM598761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KM598762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KM598763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000300851   ⟹   ENSP00000300851
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,090,842 - 31,094,760 (-)Ensembl
Ensembl Acc Id: ENST00000319788   ⟹   ENSP00000326135
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,090,842 - 31,094,940 (-)Ensembl
Ensembl Acc Id: ENST00000354895   ⟹   ENSP00000346969
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,090,842 - 31,094,956 (-)Ensembl
Ensembl Acc Id: ENST00000394971   ⟹   ENSP00000378422
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,091,104 - 31,094,549 (-)Ensembl
Ensembl Acc Id: ENST00000394975   ⟹   ENSP00000378426
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,090,854 - 31,094,797 (-)Ensembl
Ensembl Acc Id: ENST00000420057   ⟹   ENSP00000437064
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,090,842 - 31,095,633 (-)Ensembl
Ensembl Acc Id: ENST00000472468   ⟹   ENSP00000458994
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,091,182 - 31,093,611 (-)Ensembl
Ensembl Acc Id: ENST00000498155   ⟹   ENSP00000417662
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1631,091,175 - 31,095,980 (-)Ensembl
RefSeq Acc Id: NM_001311311   ⟹   NP_001298240
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381631,090,854 - 31,094,797 (-)NCBI
CHM1_11632,419,464 - 32,423,640 (-)NCBI
T2T-CHM13v2.01631,478,282 - 31,482,234 (-)NCBI
Sequence:
RefSeq Acc Id: NM_024006   ⟹   NP_076869
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381631,090,854 - 31,094,797 (-)NCBI
GRCh371631,102,175 - 31,106,699 (-)NCBI
Build 361631,009,676 - 31,013,777 (-)NCBI Archive
HuRef1628,663,874 - 28,667,978 (-)ENTREZGENE
CHM1_11632,419,464 - 32,423,640 (-)NCBI
T2T-CHM13v2.01631,478,282 - 31,482,234 (-)NCBI
Sequence:
RefSeq Acc Id: NM_206824   ⟹   NP_996560
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381631,090,854 - 31,094,797 (-)NCBI
GRCh371631,102,175 - 31,106,699 (-)NCBI
Build 361631,009,676 - 31,013,777 (-)NCBI Archive
HuRef1628,663,874 - 28,667,978 (-)ENTREZGENE
CHM1_11632,419,464 - 32,423,640 (-)NCBI
T2T-CHM13v2.01631,478,282 - 31,482,234 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001298240 (Get FASTA)   NCBI Sequence Viewer  
  NP_076869 (Get FASTA)   NCBI Sequence Viewer  
  NP_996560 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH02911 (Get FASTA)   NCBI Sequence Viewer  
  AAQ13668 (Get FASTA)   NCBI Sequence Viewer  
  AAR28759 (Get FASTA)   NCBI Sequence Viewer  
  AAR82914 (Get FASTA)   NCBI Sequence Viewer  
  AAS01052 (Get FASTA)   NCBI Sequence Viewer  
  AAS83106 (Get FASTA)   NCBI Sequence Viewer  
  ACG63771 (Get FASTA)   NCBI Sequence Viewer  
  ACZ98832 (Get FASTA)   NCBI Sequence Viewer  
  ACZ98833 (Get FASTA)   NCBI Sequence Viewer  
  AJE63370 (Get FASTA)   NCBI Sequence Viewer  
  AJE63371 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34220 (Get FASTA)   NCBI Sequence Viewer  
  ALQ34221 (Get FASTA)   NCBI Sequence Viewer  
  BAC86222 (Get FASTA)   NCBI Sequence Viewer  
  BAF82479 (Get FASTA)   NCBI Sequence Viewer  
  BAG34943 (Get FASTA)   NCBI Sequence Viewer  
  CAP58832 (Get FASTA)   NCBI Sequence Viewer  
  EAW52165 (Get FASTA)   NCBI Sequence Viewer  
  EAW52166 (Get FASTA)   NCBI Sequence Viewer  
  EAW52167 (Get FASTA)   NCBI Sequence Viewer  
  EAW52168 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000300851.6
  ENSP00000326135
  ENSP00000326135.7
  ENSP00000346969
  ENSP00000346969.4
  ENSP00000378422.3
  ENSP00000378426
  ENSP00000378426.2
  ENSP00000417662.1
  ENSP00000437064.1
  ENSP00000458994.1
GenBank Protein Q9BQB6 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_996560   ⟸   NM_206824
- Peptide Label: isoform 2
- UniProtKB: A0A0S2Z5X7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_076869   ⟸   NM_024006
- Peptide Label: isoform 1
- UniProtKB: Q6UX90 (UniProtKB/Swiss-Prot),   B2R4Z6 (UniProtKB/Swiss-Prot),   A6NIQ6 (UniProtKB/Swiss-Prot),   Q7Z2R4 (UniProtKB/Swiss-Prot),   Q9BQB6 (UniProtKB/Swiss-Prot),   A0A0S2Z6I4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001298240   ⟸   NM_001311311
- Peptide Label: isoform 3
- UniProtKB: Q9BQB6 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSP00000417662   ⟸   ENST00000498155
Ensembl Acc Id: ENSP00000300851   ⟸   ENST00000300851
Ensembl Acc Id: ENSP00000346969   ⟸   ENST00000354895
Ensembl Acc Id: ENSP00000458994   ⟸   ENST00000472468
Ensembl Acc Id: ENSP00000378426   ⟸   ENST00000394975
Ensembl Acc Id: ENSP00000378422   ⟸   ENST00000394971
Ensembl Acc Id: ENSP00000437064   ⟸   ENST00000420057
Ensembl Acc Id: ENSP00000326135   ⟸   ENST00000319788
Protein Domains
Vitamin K epoxide reductase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9BQB6-F1-model_v2 AlphaFold Q9BQB6 1-163 view protein structure

Promoters
RGD ID:6793593
Promoter ID:HG_KWN:23598
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3
Transcripts:OTTHUMT00000108586
Position:
Human AssemblyChrPosition (strand)Source
Build 361631,012,011 - 31,012,511 (-)MPROMDB
RGD ID:6793620
Promoter ID:HG_KWN:23599
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000300851,   ENST00000394971,   ENST00000394974,   OTTHUMT00000108582,   OTTHUMT00000108584,   OTTHUMT00000108589,   UC002EAR.1,   UC002EAU.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361631,013,446 - 31,014,697 (-)MPROMDB
RGD ID:7232067
Promoter ID:EPDNEW_H21779
Type:initiation region
Name:VKORC1_4
Description:vitamin K epoxide reductase complex subunit 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H21781  EPDNEW_H21782  EPDNEW_H21785  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381631,093,417 - 31,093,477EPDNEW
RGD ID:7232071
Promoter ID:EPDNEW_H21781
Type:initiation region
Name:VKORC1_1
Description:vitamin K epoxide reductase complex subunit 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H21779  EPDNEW_H21782  EPDNEW_H21785  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381631,094,797 - 31,094,857EPDNEW
RGD ID:7232073
Promoter ID:EPDNEW_H21782
Type:initiation region
Name:VKORC1_2
Description:vitamin K epoxide reductase complex subunit 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H21779  EPDNEW_H21781  EPDNEW_H21785  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381631,094,916 - 31,094,976EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:23663 AgrOrtholog
COSMIC VKORC1 COSMIC
Ensembl Genes ENSG00000167397 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000300851.10 UniProtKB/TrEMBL
  ENST00000319788 ENTREZGENE
  ENST00000319788.11 UniProtKB/Swiss-Prot
  ENST00000354895 ENTREZGENE
  ENST00000354895.4 UniProtKB/Swiss-Prot
  ENST00000394971.7 UniProtKB/TrEMBL
  ENST00000394975 ENTREZGENE
  ENST00000394975.3 UniProtKB/Swiss-Prot
  ENST00000420057.2 UniProtKB/TrEMBL
  ENST00000472468.1 UniProtKB/TrEMBL
  ENST00000498155.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1440.130 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000167397 GTEx
HGNC ID HGNC:23663 ENTREZGENE
Human Proteome Map VKORC1 Human Proteome Map
InterPro VKOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VKOR_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VKORC1/VKORC1L1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:79001 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 79001 ENTREZGENE
OMIM 608547 OMIM
PANTHER PTHR14519 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VITAMIN K EPOXIDE REDUCTASE COMPLEX SUBUNIT 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam VKOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA133787052 PharmGKB, RGD
SMART VKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0B5EEB2_HUMAN UniProtKB/TrEMBL
  A0A0B5EFL6_HUMAN UniProtKB/TrEMBL
  A0A0S2Z5X7 ENTREZGENE, UniProtKB/TrEMBL
  A0A0S2Z6I4 ENTREZGENE, UniProtKB/TrEMBL
  A6NIQ6 ENTREZGENE
  A8MV79_HUMAN UniProtKB/TrEMBL
  B2R4Z6 ENTREZGENE
  B5B596_HUMAN UniProtKB/TrEMBL
  E2DSP6_HUMAN UniProtKB/TrEMBL
  E7BQW0_HUMAN UniProtKB/TrEMBL
  F2Z3Q2_HUMAN UniProtKB/TrEMBL
  F8W9H0_HUMAN UniProtKB/TrEMBL
  H0YF24_HUMAN UniProtKB/TrEMBL
  I3L1P9_HUMAN UniProtKB/TrEMBL
  Q6UX90 ENTREZGENE
  Q7Z2R4 ENTREZGENE
  Q9BQB6 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A6NIQ6 UniProtKB/Swiss-Prot
  B2R4Z6 UniProtKB/Swiss-Prot
  Q6UX90 UniProtKB/Swiss-Prot
  Q7Z2R4 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-17 VKORC1  vitamin K epoxide reductase complex subunit 1  VKORC1  vitamin K epoxide reductase complex, subunit 1  Symbol and/or name change 5135510 APPROVED