LBH (LBH regulator of WNT signaling pathway) - Rat Genome Database

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Gene: LBH (LBH regulator of WNT signaling pathway) Homo sapiens
Analyze
Symbol: LBH
Name: LBH regulator of WNT signaling pathway
RGD ID: 1604281
HGNC Page HGNC:29532
Description: Involved in negative regulation of DNA-templated transcription; positive regulation of DNA-templated transcription; and regulation of MAPK cascade. Located in cytoplasm and nucleus. Part of protein-containing complex.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: DKFZp566J091; hLBH; limb bud and heart development; limb bud and heart development homolog; limb bud and heart development protein homolog; MGC104312; MGC163287
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38230,231,534 - 30,260,028 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl230,231,534 - 30,323,730 (+)EnsemblGRCh38hg38GRCh38
GRCh37230,454,400 - 30,482,894 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36230,307,901 - 30,336,403 (+)NCBINCBI36Build 36hg18NCBI36
Celera230,288,761 - 30,325,820 (+)NCBICelera
Cytogenetic Map2p23.1NCBI
HuRef230,192,937 - 30,221,438 (+)NCBIHuRef
CHM1_1230,384,624 - 30,413,128 (+)NCBICHM1_1
T2T-CHM13v2.0230,275,785 - 30,304,277 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4-hydroxyphenyl retinamide  (ISO)
acetamide  (ISO)
all-trans-retinoic acid  (EXP)
amphetamine  (ISO)
arsenite(3-)  (EXP)
benzo[a]pyrene  (EXP)
bis(2-chloroethyl) sulfide  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
butan-1-ol  (EXP)
butanal  (EXP)
calcitriol  (EXP)
cantharidin  (ISO)
carbon nanotube  (ISO)
chloroprene  (ISO)
choline  (ISO)
cisplatin  (EXP)
clobetasol  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (EXP)
Cuprizon  (ISO)
cyclosporin A  (EXP)
cytarabine  (EXP)
DDT  (ISO)
dibutyl phthalate  (ISO)
dioxygen  (ISO)
doxorubicin  (EXP)
endosulfan  (ISO)
ethanol  (EXP)
fenofibrate  (EXP)
fenthion  (ISO)
folic acid  (ISO)
genistein  (ISO)
gentamycin  (ISO)
hydrogen peroxide  (EXP)
indometacin  (EXP)
inulin  (ISO)
irinotecan  (EXP)
isobutanol  (EXP)
isoprenaline  (ISO)
L-methionine  (ISO)
lead diacetate  (ISO)
lipopolysaccharide  (EXP,ISO)
methidathion  (ISO)
methylisothiazolinone  (EXP)
methylmercury chloride  (EXP)
mitoxantrone  (EXP)
mono(2-ethylhexyl) phthalate  (EXP,ISO)
Monobutylphthalate  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
N-nitrosodimethylamine  (ISO)
naphthalene  (ISO)
niclosamide  (EXP)
p-toluidine  (ISO)
paracetamol  (ISO)
pentanal  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
pirinixic acid  (ISO)
propanal  (EXP)
quercetin  (EXP)
raloxifene  (EXP)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (EXP)
silicon dioxide  (EXP)
silver atom  (EXP)
silver(0)  (EXP)
simvastatin  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
sunitinib  (EXP)
T-2 toxin  (EXP)
tamoxifen  (EXP)
tebuconazole  (EXP)
testosterone  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (EXP)
thioacetamide  (ISO)
titanium dioxide  (ISO)
trichloroethene  (ISO)
trichostatin A  (EXP)
triclosan  (EXP)
urethane  (EXP)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vincristine  (EXP)
zoledronic acid  (EXP)

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8125298   PMID:8889548   PMID:11076863   PMID:11181995   PMID:11230166   PMID:11336496   PMID:12477932   PMID:14702039   PMID:15489336   PMID:15958514   PMID:16094384   PMID:16381901  
PMID:17192395   PMID:17390236   PMID:18029348   PMID:18391951   PMID:19240061   PMID:20546612   PMID:20587334   PMID:20606007   PMID:21383967   PMID:21810271   PMID:21873635   PMID:21988832  
PMID:24390342   PMID:25557837   PMID:25707478   PMID:26134586   PMID:26760575   PMID:27159840   PMID:27880917   PMID:29788015   PMID:30549979   PMID:33961781   PMID:34000384   PMID:34445087  
PMID:34975330   PMID:37268816   PMID:38297083  


Genomics

Comparative Map Data
LBH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38230,231,534 - 30,260,028 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl230,231,534 - 30,323,730 (+)EnsemblGRCh38hg38GRCh38
GRCh37230,454,400 - 30,482,894 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36230,307,901 - 30,336,403 (+)NCBINCBI36Build 36hg18NCBI36
Celera230,288,761 - 30,325,820 (+)NCBICelera
Cytogenetic Map2p23.1NCBI
HuRef230,192,937 - 30,221,438 (+)NCBIHuRef
CHM1_1230,384,624 - 30,413,128 (+)NCBICHM1_1
T2T-CHM13v2.0230,275,785 - 30,304,277 (+)NCBIT2T-CHM13v2.0
Lbh
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391773,225,300 - 73,248,941 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1773,225,300 - 73,248,942 (+)EnsemblGRCm39 Ensembl
GRCm381772,918,305 - 72,941,946 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1772,918,305 - 72,941,947 (+)EnsemblGRCm38mm10GRCm38
MGSCv371773,267,645 - 73,291,286 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361772,823,326 - 72,846,942 (+)NCBIMGSCv36mm8
Celera1777,201,369 - 77,224,975 (+)NCBICelera
Cytogenetic Map17E1.3NCBI
cM Map1744.73NCBI
Lbh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8628,321,040 - 28,344,855 (-)NCBIGRCr8
mRatBN7.2622,569,238 - 22,593,056 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl622,568,834 - 22,593,079 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx622,900,702 - 22,924,517 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0623,216,535 - 23,240,350 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0622,699,234 - 22,723,154 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0624,154,207 - 24,184,217 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl624,160,226 - 24,181,866 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0634,010,473 - 34,031,267 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4622,662,376 - 22,664,667 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera622,105,340 - 22,129,287 (-)NCBICelera
Cytogenetic Map6q14NCBI
Lbh
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546912,054,727 - 12,078,796 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546912,054,727 - 12,078,796 (+)NCBIChiLan1.0ChiLan1.0
LBH
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21296,240,784 - 96,269,439 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A96,244,758 - 96,273,413 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A30,244,474 - 30,273,048 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A30,320,247 - 30,348,139 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A30,320,249 - 30,411,779 (+)Ensemblpanpan1.1panPan2
LBH
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11723,939,135 - 23,969,611 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1723,938,772 - 24,022,140 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1723,736,913 - 23,762,365 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01724,505,537 - 24,531,139 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1724,500,181 - 24,583,683 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11723,811,250 - 23,836,515 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01723,874,403 - 23,899,677 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01723,973,706 - 23,999,175 (+)NCBIUU_Cfam_GSD_1.0
Lbh
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629268,040,234 - 68,088,820 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364932,750,745 - 2,776,141 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364932,750,745 - 2,776,145 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LBH
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3109,078,286 - 109,105,529 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13109,078,285 - 109,113,536 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23115,765,351 - 115,795,411 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LBH
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11477,278,080 - 77,306,721 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1477,280,510 - 77,306,518 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604534,778,813 - 34,807,286 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lbh
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473812,106,236 - 12,130,052 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473812,098,227 - 12,129,968 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in LBH
9 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 2p25.3-23.1(chr2:30141-31766749)x3 copy number gain See cases [RCV000052929] Chr2:30141..31766749 [GRCh38]
Chr2:30141..31991818 [GRCh37]
Chr2:20141..31845322 [NCBI36]
Chr2:2p25.3-23.1
pathogenic
GRCh38/hg38 2p25.3-16.1(chr2:66097-55570637)x3 copy number gain See cases [RCV000052933] Chr2:66097..55570637 [GRCh38]
Chr2:66097..55797773 [GRCh37]
Chr2:56097..55651277 [NCBI36]
Chr2:2p25.3-16.1
pathogenic
inv(2)(p21p23.2) inversion Endometrial carcinoma [RCV000659263] Chr2:29447680..42554394 [GRCh37]
Chr2:2p23.2-21
likely pathogenic
GRCh38/hg38 2p23.1(chr2:29907153-30845898)x3 copy number gain See cases [RCV000136571] Chr2:29907153..30845898 [GRCh38]
Chr2:30130019..31068764 [GRCh37]
Chr2:29983523..30922268 [NCBI36]
Chr2:2p23.1
uncertain significance
GRCh38/hg38 2p25.3-22.3(chr2:12770-33711509)x3 copy number gain See cases [RCV000141829] Chr2:12770..33711509 [GRCh38]
Chr2:12770..33936576 [GRCh37]
Chr2:2770..33790080 [NCBI36]
Chr2:2p25.3-22.3
pathogenic
GRCh38/hg38 2p25.1-11.2(chr2:7495123-87705899)x3 copy number gain See cases [RCV000141494] Chr2:7495123..87705899 [GRCh38]
Chr2:7635254..88005418 [GRCh37]
Chr2:7552705..87786533 [NCBI36]
Chr2:2p25.1-11.2
benign
GRCh38/hg38 2p25.3-21(chr2:236816-45983232)x3 copy number gain See cases [RCV000143682] Chr2:236816..45983232 [GRCh38]
Chr2:236816..46210371 [GRCh37]
Chr2:226816..46063875 [NCBI36]
Chr2:2p25.3-21
pathogenic
GRCh37/hg19 2p23.1(chr2:30371106-31490282)x3 copy number gain See cases [RCV000240369] Chr2:30371106..31490282 [GRCh37]
Chr2:2p23.1
uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p23.3-16.1(chr2:27861707-60790985)x3 copy number gain See cases [RCV000454271] Chr2:27861707..60790985 [GRCh37]
Chr2:2p23.3-16.1
pathogenic
GRCh37/hg19 2p23.2-21(chr2:28069882-43543420)x3 copy number gain See cases [RCV000447397] Chr2:28069882..43543420 [GRCh37]
Chr2:2p23.2-21
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
t(2;2)(p23;p21)(hg19 chr2:g.42552694::ochr2:g.29446394) inversion Small cell lung carcinoma [RCV000576833] Chr2:29446394..42552694 [GRCh37]
Chr2:2p23.2-21
pathogenic
NM_030915.4(LBH):c.296C>T (p.Ala99Val) single nucleotide variant Inborn genetic diseases [RCV003280309] Chr2:30257599 [GRCh38]
Chr2:30480465 [GRCh37]
Chr2:2p23.1
uncertain significance
GRCh37/hg19 2p23.2-22.3(chr2:29240004-32380876)x1 copy number loss not provided [RCV000682149] Chr2:29240004..32380876 [GRCh37]
Chr2:2p23.2-22.3
pathogenic
GRCh37/hg19 2p24.1-16.3(chr2:22665048-52850368)x3 copy number gain not provided [RCV000752875] Chr2:22665048..52850368 [GRCh37]
Chr2:2p24.1-16.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p23.3-21(chr2:24881528-43460021)x3 copy number gain not provided [RCV001532444] Chr2:24881528..43460021 [GRCh37]
Chr2:2p23.3-21
likely pathogenic
GRCh37/hg19 2p23.2-22.2(chr2:29940473-36813297)x1 copy number loss not provided [RCV000848001] Chr2:29940473..36813297 [GRCh37]
Chr2:2p23.2-22.2
pathogenic
GRCh37/hg19 2p23.3-21(chr2:24601818-43466284)x3 copy number gain See cases [RCV001581099] Chr2:24601818..43466284 [GRCh37]
Chr2:2p23.3-21
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) copy number gain Mosaic trisomy 2 [RCV002280628] Chr2:1..243199373 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p23.2-21(chr2:29899368-42441440) copy number loss not specified [RCV002053089] Chr2:29899368..42441440 [GRCh37]
Chr2:2p23.2-21
pathogenic
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 copy number loss See cases [RCV002287563] Chr2:11504318..111365996 [GRCh37]
Chr2:2p25.1-q13
pathogenic
GRCh37/hg19 2p25.3-22.3(chr2:706460-35523639)x3 copy number gain not provided [RCV002473946] Chr2:706460..35523639 [GRCh37]
Chr2:2p25.3-22.3
pathogenic
NM_030915.4(LBH):c.33C>A (p.Asp11Glu) single nucleotide variant Inborn genetic diseases [RCV002990998] Chr2:30234411 [GRCh38]
Chr2:30457277 [GRCh37]
Chr2:2p23.1
uncertain significance
NM_030915.4(LBH):c.178C>T (p.Arg60Cys) single nucleotide variant Inborn genetic diseases [RCV002744919] Chr2:30257481 [GRCh38]
Chr2:30480347 [GRCh37]
Chr2:2p23.1
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3107
Count of miRNA genes:1079
Interacting mature miRNAs:1330
Transcripts:ENST00000395323, ENST00000401506, ENST00000404397, ENST00000406087, ENST00000407930, ENST00000412933, ENST00000464412, ENST00000467242, ENST00000484150
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
G19750  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37230,482,592 - 30,482,803UniSTSGRCh37
Build 36230,336,096 - 30,336,307RGDNCBI36
Celera230,325,513 - 30,325,724RGD
Cytogenetic Map2p23.1UniSTS
HuRef230,221,131 - 30,221,342UniSTS
A001X24  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37230,482,592 - 30,482,803UniSTSGRCh37
Build 36230,336,096 - 30,336,307RGDNCBI36
Celera230,325,513 - 30,325,724RGD
Cytogenetic Map2p23.1UniSTS
HuRef230,221,131 - 30,221,342UniSTS
GeneMap99-GB4 RH Map2101.67UniSTS
NCBI RH Map2211.7UniSTS
SHGC-154296  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37230,478,713 - 30,479,010UniSTSGRCh37
Build 36230,332,217 - 30,332,514RGDNCBI36
Celera230,321,634 - 30,321,931RGD
Cytogenetic Map2p23.1UniSTS
HuRef230,217,252 - 30,217,549UniSTS
TNG Radiation Hybrid Map222054.0UniSTS
A005C12  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37230,480,474 - 30,480,595UniSTSGRCh37
Build 36230,333,978 - 30,334,099RGDNCBI36
Celera230,323,395 - 30,323,516RGD
Cytogenetic Map2p23.1UniSTS
HuRef230,219,013 - 30,219,134UniSTS
GeneMap99-GB4 RH Map2103.33UniSTS
NCBI RH Map2211.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 1
Medium 2079 2588 1116 234 1603 88 3496 1427 1543 316 1244 1485 156 1153 2050 1
Low 293 401 591 379 313 366 855 766 2163 94 198 108 16 1 51 738 1 2
Below cutoff 39 13 8 25 8 4 2 20 7 11 16 2 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_030915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017005059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC104698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF110224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF258555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI302040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK023425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK092206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK223541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL136703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC109376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC126434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC130415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU687531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN485291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF025586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000395323   ⟹   ENSP00000378733
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,231,534 - 30,260,028 (+)Ensembl
RefSeq Acc Id: ENST00000401506   ⟹   ENSP00000385703
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,232,153 - 30,257,760 (+)Ensembl
RefSeq Acc Id: ENST00000404397   ⟹   ENSP00000384443
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,231,537 - 30,323,730 (+)Ensembl
RefSeq Acc Id: ENST00000406087   ⟹   ENSP00000385409
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,231,537 - 30,257,656 (+)Ensembl
RefSeq Acc Id: ENST00000407930   ⟹   ENSP00000386106
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,232,180 - 30,257,670 (+)Ensembl
RefSeq Acc Id: ENST00000412933   ⟹   ENSP00000392167
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,231,536 - 30,257,548 (+)Ensembl
RefSeq Acc Id: ENST00000464412
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,231,537 - 30,256,701 (+)Ensembl
RefSeq Acc Id: ENST00000467242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,232,157 - 30,258,040 (+)Ensembl
RefSeq Acc Id: ENST00000484150
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl230,234,266 - 30,257,700 (+)Ensembl
RefSeq Acc Id: NM_030915   ⟹   NP_112177
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38230,231,534 - 30,260,028 (+)NCBI
GRCh37230,454,397 - 30,482,899 (+)RGD
Build 36230,307,901 - 30,336,403 (+)NCBI Archive
Celera230,288,761 - 30,325,820 (+)RGD
HuRef230,192,937 - 30,221,438 (+)RGD
CHM1_1230,384,624 - 30,413,128 (+)NCBI
T2T-CHM13v2.0230,275,785 - 30,304,277 (+)NCBI
Sequence:
RefSeq Acc Id: NP_112177   ⟸   NM_030915
- UniProtKB: B2RBC2 (UniProtKB/Swiss-Prot),   Q9H0Q1 (UniProtKB/Swiss-Prot),   Q53QV2 (UniProtKB/Swiss-Prot),   B5MCP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000392167   ⟸   ENST00000412933
RefSeq Acc Id: ENSP00000385703   ⟸   ENST00000401506
RefSeq Acc Id: ENSP00000384443   ⟸   ENST00000404397
RefSeq Acc Id: ENSP00000385409   ⟸   ENST00000406087
RefSeq Acc Id: ENSP00000386106   ⟸   ENST00000407930
RefSeq Acc Id: ENSP00000378733   ⟸   ENST00000395323
Protein Domains
LBH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q53QV2-F1-model_v2 AlphaFold Q53QV2 1-105 view protein structure

Promoters
RGD ID:6860020
Promoter ID:EPDNEW_H3175
Type:multiple initiation site
Name:LBH_1
Description:limb bud and heart development
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38230,231,534 - 30,231,594EPDNEW
RGD ID:6797730
Promoter ID:HG_KWN:32069
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   Jurkat,   K562,   Lymphoblastoid
Transcripts:ENST00000395323,   ENST00000401506,   ENST00000404397,   ENST00000406087,   ENST00000407930,   OTTHUMT00000325092,   OTTHUMT00000325094,   OTTHUMT00000325095
Position:
Human AssemblyChrPosition (strand)Source
Build 36230,306,966 - 30,309,182 (+)MPROMDB
RGD ID:6797727
Promoter ID:HG_KWN:32070
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   Lymphoblastoid
Transcripts:OTTHUMT00000325390
Position:
Human AssemblyChrPosition (strand)Source
Build 36230,309,711 - 30,310,917 (+)MPROMDB
RGD ID:6815325
Promoter ID:HG_MRA:8593
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell
Transcripts:AF110224,   AF258555,   BC012373
Position:
Human AssemblyChrPosition (strand)Source
Build 36230,334,256 - 30,334,756 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29532 AgrOrtholog
COSMIC LBH COSMIC
Ensembl Genes ENSG00000213626 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000395323 ENTREZGENE
  ENST00000395323.9 UniProtKB/Swiss-Prot
  ENST00000401506.1 UniProtKB/TrEMBL
  ENST00000404397.5 UniProtKB/TrEMBL
  ENST00000406087.5 UniProtKB/TrEMBL
  ENST00000407930.2 UniProtKB/TrEMBL
  ENST00000412933.5 UniProtKB/TrEMBL
GTEx ENSG00000213626 GTEx
HGNC ID HGNC:29532 ENTREZGENE
Human Proteome Map LBH Human Proteome Map
InterPro LBH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LBH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LBH_dom_prot UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:81606 UniProtKB/Swiss-Prot
NCBI Gene 81606 ENTREZGENE
OMIM 611763 OMIM
PANTHER PROTEIN LBH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR14987 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Lbh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA162393798 PharmGKB
PIRSF LBH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS LBHPROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2RBC2 ENTREZGENE
  B5MBX5_HUMAN UniProtKB/TrEMBL
  B5MC28_HUMAN UniProtKB/TrEMBL
  B5MCM2_HUMAN UniProtKB/TrEMBL
  B5MCP4 ENTREZGENE, UniProtKB/TrEMBL
  F8WC18_HUMAN UniProtKB/TrEMBL
  LBH_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q7LC25_HUMAN UniProtKB/TrEMBL
  Q9H0Q1 ENTREZGENE
UniProt Secondary B2RBC2 UniProtKB/Swiss-Prot
  Q9H0Q1 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-16 LBH  LBH regulator of WNT signaling pathway    limb bud and heart development  Symbol and/or name change 5135510 APPROVED
2012-12-12 LBH  limb bud and heart development    limb bud and heart development homolog (mouse)  Symbol and/or name change 5135510 APPROVED