RNASEK (ribonuclease K) - Rat Genome Database

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Gene: RNASEK (ribonuclease K) Homo sapiens
Analyze
Symbol: RNASEK
Name: ribonuclease K
RGD ID: 1604138
HGNC Page HGNC:33911
Description: Enables RNA endonuclease activity. Involved in endosomal lumen acidification; proton transmembrane transport; and receptor-mediated endocytosis of virus by host cell. Located in membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 17881363; MGC48891; MGC71993; ribonuclease kappa; ribonuclease, RNase K; RNase K; RNase kappa; RNase kappa-02 isoform; V-ATPase subunit f; V-type proton ATPase subunit f
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,012,624 - 7,014,532 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,012,417 - 7,014,532 (+)EnsemblGRCh38hg38GRCh38
GRCh37176,915,943 - 6,917,851 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36176,856,522 - 6,858,575 (+)NCBINCBI36Build 36hg18NCBI36
Celera176,941,303 - 6,943,356 (+)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef176,809,429 - 6,811,545 (+)NCBIHuRef
CHM1_1176,925,166 - 6,927,282 (+)NCBICHM1_1
T2T-CHM13v2.0176,913,249 - 6,915,130 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11181995   PMID:12477932   PMID:16341674   PMID:16712791   PMID:17881363   PMID:19913121   PMID:20628086   PMID:21873635   PMID:22324914   PMID:24797913   PMID:24816252   PMID:26212330  
PMID:26487785   PMID:28298427   PMID:29117863   PMID:30054827   PMID:31200028   PMID:32001091   PMID:32296183   PMID:33065002   PMID:36779763  


Genomics

Comparative Map Data
RNASEK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,012,624 - 7,014,532 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,012,417 - 7,014,532 (+)EnsemblGRCh38hg38GRCh38
GRCh37176,915,943 - 6,917,851 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36176,856,522 - 6,858,575 (+)NCBINCBI36Build 36hg18NCBI36
Celera176,941,303 - 6,943,356 (+)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef176,809,429 - 6,811,545 (+)NCBIHuRef
CHM1_1176,925,166 - 6,927,282 (+)NCBICHM1_1
T2T-CHM13v2.0176,913,249 - 6,915,130 (+)NCBIT2T-CHM13v2.0
Rnasek
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,128,949 - 70,130,678 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,126,032 - 70,130,656 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl1170,128,950 - 70,130,668 (-)EnsemblGRCm39 Ensembl
GRCm381170,238,123 - 70,239,852 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,235,206 - 70,239,830 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,238,124 - 70,239,842 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,051,625 - 70,053,354 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361170,054,321 - 70,056,041 (-)NCBIMGSCv36mm8
Celera1177,782,597 - 77,784,326 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.99NCBI
Rnasek
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81055,453,561 - 55,455,279 (-)NCBIGRCr8
mRatBN7.21054,954,904 - 54,956,622 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1054,951,991 - 54,956,601 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1059,634,447 - 59,636,159 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01059,123,046 - 59,124,758 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01054,622,170 - 54,623,882 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01056,848,367 - 56,850,085 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,848,369 - 56,850,085 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01056,592,531 - 56,594,249 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41057,077,236 - 57,078,954 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11057,090,862 - 57,092,617 (-)NCBI
Celera1054,106,371 - 54,108,089 (-)NCBICelera
Cytogenetic Map10q24NCBI
Rnasek
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554679,914,907 - 9,917,051 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554679,914,907 - 9,917,051 (-)NCBIChiLan1.0ChiLan1.0
RNASEK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21914,605,967 - 14,608,149 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11716,572,034 - 16,574,134 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0177,043,269 - 7,045,379 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1177,031,283 - 7,033,393 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,031,283 - 7,033,393 (+)Ensemblpanpan1.1panPan2
RNASEK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,040,334 - 32,042,291 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl532,040,328 - 32,042,291 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,179,273 - 32,181,017 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0532,145,529 - 32,147,272 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl532,145,587 - 32,147,270 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1532,111,597 - 32,113,340 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0532,070,841 - 32,072,584 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0532,247,319 - 32,249,063 (+)NCBIUU_Cfam_GSD_1.0
Rnasek
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560246,810,124 - 46,811,979 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936595284,151 - 286,167 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936595284,313 - 286,167 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RNASEK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,417,135 - 52,418,873 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,416,903 - 52,418,876 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21254,720,560 - 54,722,287 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RNASEK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1166,371,729 - 6,373,817 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605915,041,140 - 15,043,229 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rnasek
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247869,556,874 - 9,558,946 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247869,556,891 - 9,558,946 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RNASEK
9 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17p13.2-13.1(chr17:5732977-8038822)x1 copy number loss See cases [RCV000051043] Chr17:5732977..8038822 [GRCh38]
Chr17:5636297..7942140 [GRCh37]
Chr17:5577021..7882865 [NCBI36]
Chr17:17p13.2-13.1		 pathogenic
GRCh38/hg38 17p13.1(chr17:6958978-8335684)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052457]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052457]|See cases [RCV000052457] Chr17:6958978..8335684 [GRCh38]
Chr17:6862297..8239002 [GRCh37]
Chr17:6803021..8179727 [NCBI36]
Chr17:17p13.1		 pathogenic
GRCh38/hg38 17p13.2-13.1(chr17:3601515-7178024)x1 copy number loss See cases [RCV000053406] Chr17:3601515..7178024 [GRCh38]
Chr17:3504809..7081343 [GRCh37]
Chr17:3451558..7022067 [NCBI36]
Chr17:17p13.2-13.1		 pathogenic
GRCh38/hg38 17p13.2-12(chr17:5732953-12095349)x3 copy number gain See cases [RCV000134851] Chr17:5732953..12095349 [GRCh38]
Chr17:5636273..11998666 [GRCh37]
Chr17:5576997..11939391 [NCBI36]
Chr17:17p13.2-12		 pathogenic
GRCh38/hg38 17p13.3-13.1(chr17:198748-7491129)x3 copy number gain See cases [RCV000134970] Chr17:198748..7491129 [GRCh38]
Chr17:50690..7394448 [GRCh37]
Chr17:48539..7335172 [NCBI36]
Chr17:17p13.3-13.1		 pathogenic
GRCh38/hg38 17p13.3-13.1(chr17:162016-7697012)x1 copy number loss See cases [RCV000138214] Chr17:162016..7697012 [GRCh38]
Chr17:45835..7600330 [GRCh37]
Chr17:11807..7541055 [NCBI36]
Chr17:17p13.3-13.1		 pathogenic
GRCh38/hg38 17p13.2-13.1(chr17:6361393-7750863)x3 copy number gain See cases [RCV000138220] Chr17:6361393..7750863 [GRCh38]
Chr17:6264713..7654181 [GRCh37]
Chr17:6205437..7594906 [NCBI36]
Chr17:17p13.2-13.1		 likely pathogenic
GRCh38/hg38 17p13.3-12(chr17:162016-12343901)x3 copy number gain See cases [RCV000138531] Chr17:162016..12343901 [GRCh38]
Chr17:45835..12247218 [GRCh37]
Chr17:11807..12187943 [NCBI36]
Chr17:17p13.3-12		 pathogenic
GRCh38/hg38 17p13.1(chr17:6891357-7264234)x3 copy number gain See cases [RCV000139216] Chr17:6891357..7264234 [GRCh38]
Chr17:6794676..7167553 [GRCh37]
Chr17:6735400..7108277 [NCBI36]
Chr17:17p13.1		 uncertain significance
GRCh38/hg38 17p13.3-12(chr17:150732-14764202)x3 copy number gain See cases [RCV000142236] Chr17:150732..14764202 [GRCh38]
Chr17:525..14667519 [GRCh37]
Chr17:525..14608244 [NCBI36]
Chr17:17p13.3-12		 pathogenic
GRCh38/hg38 17p13.2-13.1(chr17:6307904-8842949)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053407]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053407]|See cases [RCV000053407] Chr17:6307904..8842949 [GRCh38]
Chr17:6211224..8746266 [GRCh37]
Chr17:6151948..8686991 [NCBI36]
Chr17:17p13.2-13.1		 pathogenic
GRCh38/hg38 17p13.1(chr17:6958978-7491129)x3 copy number gain See cases [RCV000133763] Chr17:6958978..7491129 [GRCh38]
Chr17:6862297..7394448 [GRCh37]
Chr17:6803021..7335172 [NCBI36]
Chr17:17p13.1		 uncertain significance
GRCh37/hg19 17p13.1(chr17:6575869-7002388)x3 copy number gain See cases [RCV000448314] Chr17:6575869..7002388 [GRCh37]
Chr17:17p13.1		 uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-12(chr17:525-15027737)x3 copy number gain See cases [RCV000511786] Chr17:525..15027737 [GRCh37]
Chr17:17p13.3-12		 pathogenic
NM_001004333.5(RNASEK):c.-41C>G single nucleotide variant Inborn genetic diseases [RCV003252725] Chr17:7012643 [GRCh38]
Chr17:6915962 [GRCh37]
Chr17:17p13.1		 uncertain significance
NM_001004333.5(RNASEK):c.139A>T (p.Thr47Ser) single nucleotide variant Inborn genetic diseases [RCV003246202] Chr17:7013726 [GRCh38]
Chr17:6917045 [GRCh37]
Chr17:17p13.1		 uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-12(chr17:525-11186432)x3 copy number gain not provided [RCV000683866] Chr17:525..11186432 [GRCh37]
Chr17:17p13.3-12		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.1(chr17:6800893-7304696)x1 copy number loss not provided [RCV001006866] Chr17:6800893..7304696 [GRCh37]
Chr17:17p13.1		 pathogenic
GRCh37/hg19 17p13.1(chr17:6826243-7311408)x3 copy number gain not provided [RCV000849961] Chr17:6826243..7311408 [GRCh37]
Chr17:17p13.1		 uncertain significance
NC_000017.10:g.(?_6589506)_(8151374_?)dup duplication Common variable immunodeficiency [RCV001338841]|Dyskeratosis congenita [RCV001031775] Chr17:6589506..8151374 [GRCh37]
Chr17:17p13.1		 uncertain significance
GRCh37/hg19 17p13.1(chr17:6650649-8040151)x3 copy number gain not provided [RCV001259299] Chr17:6650649..8040151 [GRCh37]
Chr17:17p13.1		 pathogenic
NC_000017.10:g.(?_6328780)_(7128416_?)dup duplication Developmental and epileptic encephalopathy, 25 [RCV001320321] Chr17:6328780..7128416 [GRCh37]
Chr17:17p13.2-13.1		 uncertain significance
NC_000017.10:g.(?_6589506)_(7128436_?)del deletion Very long chain acyl-CoA dehydrogenase deficiency [RCV001391032] Chr17:6589506..7128436 [GRCh37]
Chr17:17p13.1		 pathogenic
NC_000017.10:g.(?_6328780)_(7606804_?)dup duplication Congenital myasthenic syndrome 2A [RCV003109217]|Very long chain acyl-CoA dehydrogenase deficiency [RCV003119078] Chr17:6328780..7606804 [GRCh37]
Chr17:17p13.2-13.1		 uncertain significance
NM_001004333.4(RNASEK):c.53C>T (p.Ser18Phe) single nucleotide variant Inborn genetic diseases [RCV003255321] Chr17:7012619 [GRCh38]
Chr17:6915938 [GRCh37]
Chr17:17p13.1		 uncertain significance
NM_001004333.5(RNASEK):c.287T>C (p.Met96Thr) single nucleotide variant Inborn genetic diseases [RCV002776897] Chr17:7014276 [GRCh38]
Chr17:6917595 [GRCh37]
Chr17:17p13.1		 uncertain significance
NM_001004333.5(RNASEK):c.-38G>T single nucleotide variant Inborn genetic diseases [RCV002774734] Chr17:7012646 [GRCh38]
Chr17:6915965 [GRCh37]
Chr17:17p13.1		 uncertain significance
NM_001004333.5(RNASEK):c.108T>G (p.His36Gln) single nucleotide variant Inborn genetic diseases [RCV002778323] Chr17:7013695 [GRCh38]
Chr17:6917014 [GRCh37]
Chr17:17p13.1		 uncertain significance
NM_001004333.4(RNASEK):c.19G>A (p.Gly7Arg) single nucleotide variant Inborn genetic diseases [RCV002848835] Chr17:7012585 [GRCh38]
Chr17:6915904 [GRCh37]
Chr17:17p13.1		 uncertain significance
NM_001004333.5(RNASEK):c.241G>A (p.Gly81Ser) single nucleotide variant Inborn genetic diseases [RCV002850175] Chr17:7014230 [GRCh38]
Chr17:6917549 [GRCh37]
Chr17:17p13.1		 uncertain significance
NM_001004333.5(RNASEK):c.269A>G (p.Asn90Ser) single nucleotide variant Inborn genetic diseases [RCV003010558] Chr17:7014258 [GRCh38]
Chr17:6917577 [GRCh37]
Chr17:17p13.1		 uncertain significance
NM_001004333.5(RNASEK):c.286A>C (p.Met96Leu) single nucleotide variant Inborn genetic diseases [RCV003200874] Chr17:7014275 [GRCh38]
Chr17:6917594 [GRCh37]
Chr17:17p13.1		 uncertain significance
GRCh38/hg38 17p13.3-12(chr17:165730-11404096)x3 copy number gain Chromosome 17p13.3 duplication syndrome [RCV003327726] Chr17:165730..11404096 [GRCh38]
Chr17:17p13.3-12		 pathogenic
GRCh37/hg19 17p13.3-11.2(chr17:525-21510992)x3 copy number gain not specified [RCV003987215] Chr17:525..21510992 [GRCh37]
Chr17:17p13.3-11.2		 pathogenic
NM_001004333.5(RNASEK):c.-17C>T single nucleotide variant Inborn genetic diseases [RCV002808935] Chr17:7012667 [GRCh38]
Chr17:6915986 [GRCh37]
Chr17:17p13.1		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3109
Count of miRNA genes:666
Interacting mature miRNAs:770
Transcripts:ENST00000402093, ENST00000546395, ENST00000548577, ENST00000549393, ENST00000552039, ENST00000552176, ENST00000552321, ENST00000552842, ENST00000570898, ENST00000575822
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SGC33235  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37176,914,501 - 6,914,615UniSTSGRCh37
Build 36176,855,225 - 6,855,339RGDNCBI36
Celera176,940,006 - 6,940,120RGD
Cytogenetic Map17p13.1UniSTS
HuRef176,808,194 - 6,808,308UniSTS
Whitehead-RH Map1764.3UniSTS
NCBI RH Map17143.3UniSTS
D15S1477  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4q32-q35UniSTS
Cytogenetic Map5q11UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map2q31UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map1q31.3UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map3p25-p24UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map3p12UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map6p21.1-p12.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map14q11.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p22.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map15q21-q23UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map11q12UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map17qUniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p24.2UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 6 6
Medium 2305 2945 1485 432 1519 273 4130 2154 3590 208 1234 1396 170 1204 2786 2
Low 133 40 241 192 426 192 227 42 143 211 226 216 4 1 2 4 2
Below cutoff 1 1 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001004333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_037715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_037716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA633512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AA843796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC040977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK289930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AM746459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC036317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC095436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM835723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ223829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB160051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD176288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF980888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT277302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT762146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT762147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT762148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT762149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000546395   ⟹   ENSP00000447072
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,461 - 7,014,520 (+)Ensembl
RefSeq Acc Id: ENST00000548577   ⟹   ENSP00000449500
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,417 - 7,014,532 (+)Ensembl
RefSeq Acc Id: ENST00000549393   ⟹   ENSP00000450174
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,648 - 7,014,519 (+)Ensembl
RefSeq Acc Id: ENST00000552039   ⟹   ENSP00000447359
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,632 - 7,014,532 (+)Ensembl
RefSeq Acc Id: ENST00000552176
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,646 - 7,014,532 (+)Ensembl
RefSeq Acc Id: ENST00000552321   ⟹   ENSP00000450182
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,013,231 - 7,014,520 (+)Ensembl
RefSeq Acc Id: ENST00000552842   ⟹   ENSP00000449670
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,646 - 7,014,530 (+)Ensembl
RefSeq Acc Id: ENST00000570898   ⟹   ENSP00000459471
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,622 - 7,014,330 (+)Ensembl
RefSeq Acc Id: ENST00000575822
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,648 - 7,013,817 (+)Ensembl
RefSeq Acc Id: ENST00000593646   ⟹   ENSP00000468923
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl177,012,624 - 7,014,532 (+)Ensembl
RefSeq Acc Id: NM_001004333   ⟹   NP_001004333
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38177,012,624 - 7,014,532 (+)NCBI
GRCh37176,915,736 - 6,917,852 (+)ENTREZGENE
Build 36176,856,522 - 6,858,575 (+)NCBI Archive
Celera176,941,303 - 6,943,356 (+)RGD
HuRef176,809,429 - 6,811,545 (+)ENTREZGENE
CHM1_1176,925,166 - 6,927,282 (+)NCBI
T2T-CHM13v2.0176,913,249 - 6,915,130 (+)NCBI
Sequence:
RefSeq Acc Id: NR_037715
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38177,012,624 - 7,014,532 (+)NCBI
GRCh37176,915,736 - 6,917,852 (+)ENTREZGENE
HuRef176,809,429 - 6,811,545 (+)ENTREZGENE
CHM1_1176,925,166 - 6,927,282 (+)NCBI
T2T-CHM13v2.0176,913,249 - 6,915,130 (+)NCBI
Sequence:
RefSeq Acc Id: NR_037716
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38177,012,624 - 7,014,532 (+)NCBI
GRCh37176,915,736 - 6,917,852 (+)ENTREZGENE
HuRef176,809,429 - 6,811,545 (+)ENTREZGENE
CHM1_1176,925,166 - 6,927,282 (+)NCBI
T2T-CHM13v2.0176,913,249 - 6,915,130 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001004333   ⟸   NM_001004333
- UniProtKB: A0A0C4DH89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000459471   ⟸   ENST00000570898
RefSeq Acc Id: ENSP00000447072   ⟸   ENST00000546395
RefSeq Acc Id: ENSP00000449500   ⟸   ENST00000548577
RefSeq Acc Id: ENSP00000450174   ⟸   ENST00000549393
RefSeq Acc Id: ENSP00000447359   ⟸   ENST00000552039
RefSeq Acc Id: ENSP00000450182   ⟸   ENST00000552321
RefSeq Acc Id: ENSP00000449670   ⟸   ENST00000552842
RefSeq Acc Id: ENSP00000468923   ⟸   ENST00000593646

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6P5S7-F1-model_v2 AlphaFold Q6P5S7 1-137 view protein structure

Promoters
RGD ID:6794132
Promoter ID:HG_KWN:24834
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000399541,   UC002GDY.1,   UC002GEA.2,   UC002GEB.2,   UC002GEC.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36176,856,274 - 6,856,774 (-)MPROMDB
RGD ID:7233609
Promoter ID:EPDNEW_H22550
Type:initiation region
Name:RNASEK_1
Description:ribonuclease K
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H22551  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38177,012,624 - 7,012,684EPDNEW
RGD ID:7233611
Promoter ID:EPDNEW_H22551
Type:initiation region
Name:RNASEK_2
Description:ribonuclease K
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H22550  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38177,013,453 - 7,013,513EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:33911 AgrOrtholog
COSMIC RNASEK COSMIC
Ensembl Genes ENSG00000219200 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000546395.5 UniProtKB/TrEMBL
  ENST00000548577.5 UniProtKB/Swiss-Prot
  ENST00000549393 ENTREZGENE
  ENST00000549393.2 UniProtKB/TrEMBL
  ENST00000552039 ENTREZGENE
  ENST00000552039.2 UniProtKB/TrEMBL
  ENST00000552321.2 UniProtKB/TrEMBL
  ENST00000552842.1 UniProtKB/TrEMBL
  ENST00000570898.1 UniProtKB/TrEMBL
  ENST00000593646 ENTREZGENE
  ENST00000593646.6 UniProtKB/TrEMBL
GTEx ENSG00000219200 GTEx
HGNC ID HGNC:33911 ENTREZGENE
Human Proteome Map RNASEK Human Proteome Map
InterPro RNase_K UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:440400 UniProtKB/Swiss-Prot
NCBI Gene 440400 ENTREZGENE
OMIM 617098 OMIM
PANTHER PTHR31733 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RIBONUCLEASE KAPPA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA162401458 PharmGKB
UniProt A0A060KS66_HUMAN UniProtKB/TrEMBL
  A0A087WSZ8_HUMAN UniProtKB/TrEMBL
  A0A0C4DH85_HUMAN UniProtKB/TrEMBL
  A0A0C4DH89 ENTREZGENE, UniProtKB/TrEMBL
  A0A1L2BPI1_HUMAN UniProtKB/TrEMBL
  A0A1L2BPI6_HUMAN UniProtKB/TrEMBL
  A0A1L2BPJ0_HUMAN UniProtKB/TrEMBL
  A0A3Q7ZYN9_HUMAN UniProtKB/TrEMBL
  A0A3Q7ZZZ6_HUMAN UniProtKB/TrEMBL
  A0A3S6CYT1_HUMAN UniProtKB/TrEMBL
  A0A3S7I545_HUMAN UniProtKB/TrEMBL
  F8W1G5_HUMAN UniProtKB/TrEMBL
  H0YIM4_HUMAN UniProtKB/TrEMBL
  H0YIU3_HUMAN UniProtKB/TrEMBL
  Q6P5S7 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary G3V1Z9 UniProtKB/Swiss-Prot
  Q502Z2 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-26 RNASEK  ribonuclease K    ribonuclease, RNase K  Symbol and/or name change 5135510 APPROVED