SPSB4 (splA/ryanodine receptor domain and SOCS box containing 4) - Rat Genome Database

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Gene: SPSB4 (splA/ryanodine receptor domain and SOCS box containing 4) Homo sapiens
Analyze
Symbol: SPSB4
Name: splA/ryanodine receptor domain and SOCS box containing 4
RGD ID: 1603370
HGNC Page HGNC:30630
Description: Enables ubiquitin ligase-substrate adaptor activity. Involved in several processes, including positive regulation of protein polyubiquitination; protein ubiquitination; and ubiquitin-dependent protein catabolic process. Located in cytosol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: SPRY domain-containing SOCS box protein 4; SPRY domain-containing SOCS box protein SSB-4; SSB-4; SSB4
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383141,051,347 - 141,148,611 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3141,051,347 - 141,148,611 (+)EnsemblGRCh38hg38GRCh38
GRCh373140,770,189 - 140,867,453 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363142,253,433 - 142,350,143 (+)NCBINCBI36Build 36hg18NCBI36
Celera3139,194,129 - 139,290,840 (+)NCBICelera
Cytogenetic Map3q23NCBI
HuRef3138,145,605 - 138,242,314 (+)NCBIHuRef
CHM1_13140,733,736 - 140,830,404 (+)NCBICHM1_1
T2T-CHM13v2.03143,798,863 - 143,896,164 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12076535   PMID:12477932   PMID:14702039   PMID:15146197   PMID:15489334   PMID:15601820   PMID:15713673   PMID:19159283   PMID:20379614   PMID:20561531   PMID:20603330   PMID:21199876  
PMID:21873635   PMID:23041239   PMID:24262325   PMID:26392558   PMID:28514442   PMID:28931592   PMID:31607207   PMID:32513696   PMID:32814053   PMID:33961781  


Genomics

Comparative Map Data
SPSB4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383141,051,347 - 141,148,611 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3141,051,347 - 141,148,611 (+)EnsemblGRCh38hg38GRCh38
GRCh373140,770,189 - 140,867,453 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363142,253,433 - 142,350,143 (+)NCBINCBI36Build 36hg18NCBI36
Celera3139,194,129 - 139,290,840 (+)NCBICelera
Cytogenetic Map3q23NCBI
HuRef3138,145,605 - 138,242,314 (+)NCBIHuRef
CHM1_13140,733,736 - 140,830,404 (+)NCBICHM1_1
T2T-CHM13v2.03143,798,863 - 143,896,164 (+)NCBIT2T-CHM13v2.0
Spsb4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39996,825,535 - 96,900,408 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl996,825,535 - 96,900,896 (-)EnsemblGRCm39 Ensembl
GRCm38996,943,482 - 97,018,355 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl996,943,482 - 97,018,843 (-)EnsemblGRCm38mm10GRCm38
MGSCv37996,843,901 - 96,918,774 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36996,752,834 - 96,827,707 (-)NCBIMGSCv36mm8
Celera996,503,220 - 96,578,054 (-)NCBICelera
Cytogenetic Map9E3.3NCBI
cM Map950.74NCBI
Spsb4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88106,416,039 - 106,489,271 (-)NCBIGRCr8
mRatBN7.2897,536,519 - 97,609,757 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl897,536,520 - 97,609,787 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8103,204,973 - 103,278,112 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08101,404,227 - 101,477,360 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0899,243,182 - 99,316,308 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08104,840,939 - 104,912,959 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8104,840,940 - 104,912,959 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08104,287,498 - 104,359,356 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48102,034,525 - 102,107,618 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera896,977,033 - 97,049,836 (-)NCBICelera
Cytogenetic Map8q31NCBI
Spsb4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555084,539,516 - 4,615,439 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555084,539,531 - 4,615,439 (-)NCBIChiLan1.0ChiLan1.0
SPSB4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22138,961,906 - 139,058,518 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13138,966,638 - 139,063,250 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03138,085,136 - 138,181,747 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13145,682,533 - 145,779,049 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3145,682,533 - 145,779,049 (+)Ensemblpanpan1.1panPan2
SPSB4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12336,998,124 - 37,082,576 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2336,997,705 - 37,077,401 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2336,987,084 - 37,068,486 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02337,528,830 - 37,610,138 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2337,528,801 - 37,610,136 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12337,210,665 - 37,292,472 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02337,284,991 - 37,366,350 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02337,527,473 - 37,608,794 (+)NCBIUU_Cfam_GSD_1.0
Spsb4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560276,214,048 - 76,281,647 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365402,953,831 - 3,021,485 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365402,953,837 - 3,021,430 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SPSB4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1381,867,740 - 81,926,762 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11381,849,908 - 81,926,764 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21389,692,304 - 89,769,847 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SPSB4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11549,442,817 - 49,529,654 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1549,442,864 - 49,515,357 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604122,387,229 - 22,474,610 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Spsb4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473017,692,959 - 17,774,497 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473017,692,124 - 17,774,321 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SPSB4
15 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 3q22.1-23(chr3:132690641-141064444)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051570]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051570]|See cases [RCV000051570] Chr3:132690641..141064444 [GRCh38]
Chr3:132409485..140783286 [GRCh37]
Chr3:133892175..142265976 [NCBI36]
Chr3:3q22.1-23		 pathogenic
GRCh38/hg38 3q22.2-24(chr3:135227451-145870770)x1 copy number loss See cases [RCV000051572] Chr3:135227451..145870770 [GRCh38]
Chr3:134946293..145588557 [GRCh37]
Chr3:136428983..147071247 [NCBI36]
Chr3:3q22.2-24		 pathogenic
GRCh38/hg38 3q23(chr3:140069651-141507894)x1 copy number loss See cases [RCV000051574] Chr3:140069651..141507894 [GRCh38]
Chr3:139788493..141226736 [GRCh37]
Chr3:141271183..142709426 [NCBI36]
Chr3:3q23		 pathogenic
GRCh38/hg38 3q22.3-29(chr3:137126982-198110178)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051723]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051723]|See cases [RCV000051723] Chr3:137126982..198110178 [GRCh38]
Chr3:136845824..197837049 [GRCh37]
Chr3:138328514..199321446 [NCBI36]
Chr3:3q22.3-29		 pathogenic
GRCh37/hg19 3q22.2-23(chr3:135186881-140826836)x3 copy number gain not provided [RCV000846949] Chr3:135186881..140826836 [GRCh37]
Chr3:3q22.2-23		 uncertain significance
GRCh38/hg38 3q22.3-24(chr3:137932000-144468739)x1 copy number loss See cases [RCV000134711] Chr3:137932000..144468739 [GRCh38]
Chr3:137650842..144187581 [GRCh37]
Chr3:139133532..145670271 [NCBI36]
Chr3:3q22.3-24		 pathogenic
GRCh38/hg38 3q13.11-29(chr3:103426882-198110178)x3 copy number gain See cases [RCV000134948] Chr3:103426882..198110178 [GRCh38]
Chr3:103145726..197837049 [GRCh37]
Chr3:104628416..199321446 [NCBI36]
Chr3:3q13.11-29		 pathogenic
GRCh38/hg38 3q22.1-24(chr3:129817243-143381624)x1 copy number loss See cases [RCV000136558] Chr3:129817243..143381624 [GRCh38]
Chr3:129536086..143100466 [GRCh37]
Chr3:131018776..144583156 [NCBI36]
Chr3:3q22.1-24		 pathogenic
GRCh38/hg38 3q22.2-25.1(chr3:134257180-149729538)x1 copy number loss See cases [RCV000138135] Chr3:134257180..149729538 [GRCh38]
Chr3:133976022..149447325 [GRCh37]
Chr3:135458712..150930015 [NCBI36]
Chr3:3q22.2-25.1		 pathogenic|likely benign
GRCh38/hg38 3q22.3-24(chr3:137991123-143618786)x1 copy number loss See cases [RCV000139135] Chr3:137991123..143618786 [GRCh38]
Chr3:137709965..143337628 [GRCh37]
Chr3:139192655..144820318 [NCBI36]
Chr3:3q22.3-24		 pathogenic
GRCh38/hg38 3q22.2-23(chr3:134333553-141701458)x1 copy number loss See cases [RCV000140453] Chr3:134333553..141701458 [GRCh38]
Chr3:134052395..141420300 [GRCh37]
Chr3:135535085..142902990 [NCBI36]
Chr3:3q22.2-23		 pathogenic
GRCh38/hg38 3q22.1-23(chr3:129817243-141425155)x1 copy number loss See cases [RCV000140995] Chr3:129817243..141425155 [GRCh38]
Chr3:129536086..141143997 [GRCh37]
Chr3:131018776..142626687 [NCBI36]
Chr3:3q22.1-23		 pathogenic
GRCh38/hg38 3q11.1-24(chr3:93800620-145695381)x3 copy number gain See cases [RCV000142340] Chr3:93800620..145695381 [GRCh38]
Chr3:93519464..145413168 [GRCh37]
Chr3:95002154..146895858 [NCBI36]
Chr3:3q11.1-24		 pathogenic
GRCh38/hg38 3q22.1-24(chr3:132716978-144784743)x1 copy number loss See cases [RCV000143634] Chr3:132716978..144784743 [GRCh38]
Chr3:132435822..144503585 [GRCh37]
Chr3:133918512..145986275 [NCBI36]
Chr3:3q22.1-24		 pathogenic
GRCh37/hg19 3q22.3-23(chr3:135935129-141867748)x3 copy number gain See cases [RCV000239877] Chr3:135935129..141867748 [GRCh37]
Chr3:3q22.3-23		 likely pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3q23(chr3:140777061-140778138)x1 copy number loss not provided [RCV000742838] Chr3:140777061..140778138 [GRCh37]
Chr3:3q23		 benign
GRCh37/hg19 3q22.2-24(chr3:135288025-146874012) copy number gain not provided [RCV000767703] Chr3:135288025..146874012 [GRCh37]
Chr3:3q22.2-24		 pathogenic
NM_080862.3(SPSB4):c.643G>T (p.Ala215Ser) single nucleotide variant Inborn genetic diseases [RCV003266495] Chr3:141066747 [GRCh38]
Chr3:140785589 [GRCh37]
Chr3:3q23		 uncertain significance
GRCh37/hg19 3q13.31-26.31(chr3:116620308-172042292)x3 copy number gain not provided [RCV002472621] Chr3:116620308..172042292 [GRCh37]
Chr3:3q13.31-26.31		 pathogenic
GRCh37/hg19 3q22.3-26.1(chr3:138145289-162275610)x3 copy number gain See cases [RCV001194586] Chr3:138145289..162275610 [GRCh37]
Chr3:3q22.3-26.1		 pathogenic
GRCh37/hg19 3q23(chr3:138737687-142053396)x1 copy number loss not provided [RCV001259239] Chr3:138737687..142053396 [GRCh37]
Chr3:3q23		 pathogenic
GRCh37/hg19 3q23(chr3:140829421-141154102)x1 copy number loss not provided [RCV001259240] Chr3:140829421..141154102 [GRCh37]
Chr3:3q23		 uncertain significance
GRCh37/hg19 3q22.3-26.1(chr3:138173683-162494699) copy number gain Global developmental delay [RCV001352648] Chr3:138173683..162494699 [GRCh37]
Chr3:3q22.3-26.1		 pathogenic
NM_080862.3(SPSB4):c.595G>A (p.Val199Met) single nucleotide variant Inborn genetic diseases [RCV003264592] Chr3:141066699 [GRCh38]
Chr3:140785541 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.782C>T (p.Pro261Leu) single nucleotide variant Inborn genetic diseases [RCV002751785] Chr3:141147229 [GRCh38]
Chr3:140866071 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.673C>G (p.Arg225Gly) single nucleotide variant Inborn genetic diseases [RCV002860458] Chr3:141066777 [GRCh38]
Chr3:140785619 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.663A>C (p.Glu221Asp) single nucleotide variant Inborn genetic diseases [RCV002817513] Chr3:141066767 [GRCh38]
Chr3:140785609 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.589C>G (p.Leu197Val) single nucleotide variant Inborn genetic diseases [RCV002845483] Chr3:141066693 [GRCh38]
Chr3:140785535 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.713T>G (p.Met238Arg) single nucleotide variant Inborn genetic diseases [RCV002784846] Chr3:141147160 [GRCh38]
Chr3:140866002 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.457G>C (p.Gly153Arg) single nucleotide variant Inborn genetic diseases [RCV002868745] Chr3:141066561 [GRCh38]
Chr3:140785403 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.566G>T (p.Ser189Ile) single nucleotide variant Inborn genetic diseases [RCV002985100] Chr3:141066670 [GRCh38]
Chr3:140785512 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.724C>T (p.Arg242Trp) single nucleotide variant Inborn genetic diseases [RCV003215657] Chr3:141147171 [GRCh38]
Chr3:140866013 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.757C>T (p.Arg253Cys) single nucleotide variant Inborn genetic diseases [RCV003286332] Chr3:141147204 [GRCh38]
Chr3:140866046 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.367C>A (p.Pro123Thr) single nucleotide variant Inborn genetic diseases [RCV003356368] Chr3:141066471 [GRCh38]
Chr3:140785313 [GRCh37]
Chr3:3q23		 uncertain significance
NM_080862.3(SPSB4):c.29A>G (p.Lys10Arg) single nucleotide variant Inborn genetic diseases [RCV003361818] Chr3:141066133 [GRCh38]
Chr3:140784975 [GRCh37]
Chr3:3q23		 uncertain significance
Single allele duplication not provided [RCV003448680] Chr3:140154329..197847235 [GRCh37]
Chr3:3q23-29		 pathogenic
Single allele deletion not provided [RCV003448666] Chr3:137912620..141811656 [GRCh37]
Chr3:3q22.3-23		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1977
Count of miRNA genes:737
Interacting mature miRNAs:845
Transcripts:ENST00000310546, ENST00000507895, ENST00000508126, ENST00000508828
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D3S4137  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373140,777,379 - 140,777,497UniSTSGRCh37
Build 363142,260,069 - 142,260,187RGDNCBI36
Celera3139,200,764 - 139,200,882RGD
Cytogenetic Map3q23UniSTS
HuRef3138,152,240 - 138,152,358UniSTS
Stanford-G3 RH Map36334.0UniSTS
NCBI RH Map31219.1UniSTS
SHGC-17816  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373140,801,431 - 140,801,711UniSTSGRCh37
Build 363142,284,121 - 142,284,401RGDNCBI36
Celera3139,224,815 - 139,225,095RGD
Cytogenetic Map3q23UniSTS
HuRef3138,176,291 - 138,176,571UniSTS
Whitehead-RH Map3587.2UniSTS
Whitehead-YAC Contig Map3 UniSTS
RH102898  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373140,867,137 - 140,867,317UniSTSGRCh37
Build 363142,349,827 - 142,350,007RGDNCBI36
Celera3139,290,524 - 139,290,704RGD
Cytogenetic Map3q23UniSTS
HuRef3138,241,998 - 138,242,178UniSTS
GeneMap99-GB4 RH Map3504.33UniSTS
SHGC-77274  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373140,793,350 - 140,793,485UniSTSGRCh37
Build 363142,276,040 - 142,276,175RGDNCBI36
Celera3139,216,734 - 139,216,869RGD
Cytogenetic Map3q23UniSTS
HuRef3138,168,210 - 138,168,345UniSTS
TNG Radiation Hybrid Map379876.0UniSTS
GeneMap99-GB4 RH Map3435.59UniSTS
NCBI RH Map31060.8UniSTS
D1S1423  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map6p22.3-p21.32UniSTS
Cytogenetic Map6q22.33UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map7q11.2UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map9q12UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map18q22.1UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map10p14-p13UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map11q23-q24UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map22cen-q12.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map15q11.2-q21.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map4q28UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map1q41-q42UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map11q24.1UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map3q13UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map9p21.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic MapXq27.2UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map4q31UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map20q11.21-q11.23UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map4q31.23UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map13q33.3UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map4q24UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map15q26UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map4p15.1-p14UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map7q32.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map3q21-q24UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map8q24.12UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map6q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map20pter-p12UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map14q22.2UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map6p22-p21UniSTS
Cytogenetic Map17q21.1-q21.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12p13.2-p12.3UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map5q22.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map10q22.3-q23.2UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map3p12.3UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map3q11.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6p24.2UniSTS
Cytogenetic Map20q13.33UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 5 12 94 2 10 2 177 6 162 36 307 25 1
Low 851 1018 371 57 314 51 822 1215 2362 109 278 661 8 426 509 2
Below cutoff 1386 1571 1101 442 720 313 3116 954 1139 188 670 775 132 745 2173 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_080862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_924215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_924216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC022215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC108727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF086345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF403029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK056147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK056367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC051354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX376865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN366621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000310546   ⟹   ENSP00000311609
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3141,051,347 - 141,148,611 (+)Ensembl
RefSeq Acc Id: ENST00000507895
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3141,077,446 - 141,147,460 (+)Ensembl
RefSeq Acc Id: ENST00000508126   ⟹   ENSP00000422034
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3141,066,638 - 141,148,610 (+)Ensembl
RefSeq Acc Id: ENST00000508828
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3141,076,960 - 141,080,373 (+)Ensembl
RefSeq Acc Id: NM_080862   ⟹   NP_543138
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383141,051,347 - 141,148,611 (+)NCBI
GRCh373140,770,743 - 140,867,453 (+)RGD
Build 363142,253,433 - 142,350,143 (+)NCBI Archive
Celera3139,194,129 - 139,290,840 (+)RGD
HuRef3138,145,605 - 138,242,314 (+)ENTREZGENE
CHM1_13140,733,237 - 140,830,404 (+)NCBI
T2T-CHM13v2.03143,798,863 - 143,896,164 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017007509   ⟹   XP_016862998
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383141,051,347 - 141,093,884 (+)NCBI
Sequence:
RefSeq Acc Id: XM_054348414   ⟹   XP_054204389
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.03143,798,863 - 143,841,412 (+)NCBI
RefSeq Acc Id: XR_008486852
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.03143,798,863 - 143,841,412 (+)NCBI
RefSeq Acc Id: XR_924215
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383141,051,347 - 141,093,884 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_543138   ⟸   NM_080862
- UniProtKB: Q96A44 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016862998   ⟸   XM_017007509
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSP00000422034   ⟸   ENST00000508126
RefSeq Acc Id: ENSP00000311609   ⟸   ENST00000310546
RefSeq Acc Id: XP_054204389   ⟸   XM_054348414
- Peptide Label: isoform X1
Protein Domains
B30.2/SPRY   SOCS box

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96A44-F1-model_v2 AlphaFold Q96A44 1-273 view protein structure

Promoters
RGD ID:6865838
Promoter ID:EPDNEW_H6084
Type:single initiation site
Name:SPSB4_2
Description:splA/ryanodine receptor domain and SOCS box containing 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H6085  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh383141,050,944 - 141,051,004EPDNEW
RGD ID:6865840
Promoter ID:EPDNEW_H6085
Type:initiation region
Name:SPSB4_1
Description:splA/ryanodine receptor domain and SOCS box containing 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H6084  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh383141,051,359 - 141,051,419EPDNEW
RGD ID:6801716
Promoter ID:HG_KWN:46350
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Jurkat,   NB4
Transcripts:ENST00000393014,   NM_080862
Position:
Human AssemblyChrPosition (strand)Source
Build 363142,252,216 - 142,252,716 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:30630 AgrOrtholog
COSMIC SPSB4 COSMIC
Ensembl Genes ENSG00000175093 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000310546 ENTREZGENE
  ENST00000310546.3 UniProtKB/Swiss-Prot
  ENST00000508126.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.920 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOCS box UniProtKB/Swiss-Prot
GTEx ENSG00000175093 GTEx
HGNC ID HGNC:30630 ENTREZGENE
Human Proteome Map SPSB4 Human Proteome Map
InterPro B30.2/SPRY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  B30.2/SPRY_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ConA-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOCS_box UniProtKB/Swiss-Prot
  SOCS_box-like_dom_sf UniProtKB/Swiss-Prot
  SPRY_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:92369 UniProtKB/Swiss-Prot
NCBI Gene 92369 ENTREZGENE
OMIM 611660 OMIM
PANTHER PROTEIN GUSTAVUS UniProtKB/TrEMBL
  SPRY DOMAIN CONTAINING SOCS BOX PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPRY DOMAIN-CONTAINING SOCS BOX PROTEIN 4 UniProtKB/Swiss-Prot
Pfam SOCS_box UniProtKB/Swiss-Prot
  SPRY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142670874 PharmGKB
PROSITE B302_SPRY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOCS UniProtKB/Swiss-Prot
SMART SOCS_box UniProtKB/Swiss-Prot
  SPRY UniProtKB/Swiss-Prot
Superfamily-SCOP SSF158235 UniProtKB/Swiss-Prot
  SSF49899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt H0Y8T2_HUMAN UniProtKB/TrEMBL
  Q96A44 ENTREZGENE, UniProtKB/Swiss-Prot