MIR611 (microRNA 611) - Rat Genome Database

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Gene: MIR611 (microRNA 611) Homo sapiens
Analyze
Symbol: MIR611
Name: microRNA 611
RGD ID: 1603065
HGNC Page HGNC:32867
Description: Predicted to be involved in miRNA-mediated post-transcriptional gene silencing. Predicted to be part of RISC complex.
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: hsa-mir-611; MIRN611
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381161,792,495 - 61,792,561 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1161,792,495 - 61,792,561 (-)EnsemblGRCh38hg38GRCh38
GRCh371161,559,967 - 61,560,033 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361161,316,542 - 61,316,608 (-)NCBINCBI36Build 36hg18NCBI36
Celera1158,895,379 - 58,895,445 (-)NCBICelera
Cytogenetic Map11q12.2NCBI
HuRef1157,888,201 - 57,888,267 (-)NCBIHuRef
CHM1_11161,443,182 - 61,443,248 (-)NCBICHM1_1
T2T-CHM13v2.01161,781,412 - 61,781,478 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
RISC complex  (IEA)

References
Additional References at PubMed
PMID:16381832   PMID:16505370   PMID:21829377   PMID:24816252  


Genomics


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11q12.2(chr11:61409529-61821159)x3 copy number gain See cases [RCV000136058] Chr11:61409529..61821159 [GRCh38]
Chr11:61177001..61588631 [GRCh37]
Chr11:60933577..61345207 [NCBI36]
Chr11:11q12.2
likely benign
miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:7989
Count of gene targets:4135
Count of transcripts:7254
Interacting mature miRNAs:hsa-miR-611
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


RefSeq Acc Id: ENST00000384869
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1161,792,495 - 61,792,561 (-)Ensembl
RefSeq Acc Id: NR_030342
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381161,792,495 - 61,792,561 (-)NCBI
GRCh371161,559,967 - 61,560,033 (-)RGD
Celera1158,895,379 - 58,895,445 (-)RGD
HuRef1157,888,201 - 57,888,267 (-)RGD
CHM1_11161,443,182 - 61,443,248 (-)NCBI
T2T-CHM13v2.01161,781,412 - 61,781,478 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC MIR611 COSMIC
Ensembl Genes ENSG00000284108 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000384869 ENTREZGENE
GTEx ENSG00000284108 GTEx
HGNC ID HGNC:32867 ENTREZGENE
Human Proteome Map MIR611 Human Proteome Map
miRBase MI0003624 ENTREZGENE
NCBI Gene 693196 ENTREZGENE
PharmGKB PA164722907 PharmGKB
RNAcentral URS0000643E32 RNACentral
  URS000075B74D RNACentral