HEXIM2 (HEXIM P-TEFb complex subunit 2) - Rat Genome Database

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Gene: HEXIM2 (HEXIM P-TEFb complex subunit 2) Homo sapiens
Analyze
Symbol: HEXIM2
Name: HEXIM P-TEFb complex subunit 2
RGD ID: 1601726
HGNC Page HGNC:28591
Description: Enables 7SK snRNA binding activity; cyclin-dependent protein serine/threonine kinase inhibitor activity; and identical protein binding activity. Involved in negative regulation of transcription by RNA polymerase II. Located in cytosol and nuclear speck.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: FLJ32384; hexamethylene bis-acetamide inducible 2; hexamethylene bis-acetamide-inducible protein 2; hexamethylene bisacetamide inducible 2; hexamethylene-bis-acetamide-inducible transcript 2; hexamthylene bis-acetamide inducible 2; L3; MAQ1 paralog
RGD Orthologs
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381745,160,174 - 45,170,040 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1745,160,700 - 45,170,040 (+)EnsemblGRCh38hg38GRCh38
GRCh371743,237,541 - 43,247,407 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361740,594,047 - 40,603,189 (+)NCBINCBI36Build 36hg18NCBI36
Celera1739,947,916 - 39,957,031 (+)NCBICelera
Cytogenetic Map17q21.31NCBI
HuRef1739,001,091 - 39,009,915 (+)NCBIHuRef
CHM1_11743,473,807 - 43,482,952 (+)NCBICHM1_1
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IEA,ISS)
cytosol  (IDA)
nuclear speck  (IDA)
nucleoplasm  (IBA,IDA,IEA)
nucleus  (IEA,ISS)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:12832472   PMID:14702039   PMID:15146197   PMID:15302935   PMID:15334068   PMID:15342556   PMID:15713661   PMID:15713662   PMID:15965233   PMID:15992410  
PMID:15994294   PMID:16344560   PMID:17207965   PMID:17643375   PMID:17709395   PMID:18029348   PMID:18281698   PMID:18655042   PMID:19430483   PMID:19883659   PMID:21044950   PMID:21516116  
PMID:21873635   PMID:22355797   PMID:22377309   PMID:23455922   PMID:23518577   PMID:24515107   PMID:25416956   PMID:25609649   PMID:26186194   PMID:26673895   PMID:27684187   PMID:28514442  
PMID:28611215   PMID:29802200   PMID:29845934   PMID:32296183   PMID:32393512   PMID:32707033   PMID:33961781   PMID:35140242   PMID:35271311   PMID:35944360   PMID:36244648   PMID:36736316  


Genomics

Comparative Map Data
HEXIM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381745,160,174 - 45,170,040 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1745,160,700 - 45,170,040 (+)EnsemblGRCh38hg38GRCh38
GRCh371743,237,541 - 43,247,407 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361740,594,047 - 40,603,189 (+)NCBINCBI36Build 36hg18NCBI36
Celera1739,947,916 - 39,957,031 (+)NCBICelera
Cytogenetic Map17q21.31NCBI
HuRef1739,001,091 - 39,009,915 (+)NCBIHuRef
CHM1_11743,473,807 - 43,482,952 (+)NCBICHM1_1
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBIT2T-CHM13v2.0
Hexim2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911103,014,086 - 103,030,734 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11103,023,255 - 103,030,702 (+)EnsemblGRCm39 Ensembl
GRCm3811103,123,260 - 103,139,908 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11103,132,429 - 103,139,876 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711102,994,653 - 103,001,222 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611102,949,404 - 102,955,998 (+)NCBIMGSCv36mm8
Celera11114,816,349 - 114,849,525 (+)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1166.71NCBI
Hexim2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81088,572,102 - 88,584,856 (+)NCBIGRCr8
mRatBN7.21088,077,870 - 88,084,776 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1088,079,014 - 88,084,775 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1093,115,155 - 93,120,921 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01092,581,799 - 92,587,566 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01087,975,151 - 87,980,918 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01091,212,296 - 91,222,841 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1091,217,079 - 91,222,840 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01090,988,728 - 90,994,491 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41092,306,494 - 92,312,256 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11092,320,794 - 92,329,877 (+)NCBI
Celera1086,780,500 - 86,786,262 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
HEXIM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21919,667,571 - 19,676,969 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11721,636,155 - 21,646,713 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01712,157,392 - 12,167,281 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11712,333,957 - 12,343,424 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1712,333,957 - 12,343,399 (-)Ensemblpanpan1.1panPan2
HEXIM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1918,373,761 - 18,379,185 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl918,373,992 - 18,377,260 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha917,758,535 - 17,763,959 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0919,046,798 - 19,052,222 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl919,046,986 - 19,050,297 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1917,925,068 - 17,930,491 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0918,103,901 - 18,109,325 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0918,259,869 - 18,265,293 (-)NCBIUU_Cfam_GSD_1.0
Hexim2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560217,717,605 - 17,722,656 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365411,472,027 - 1,477,048 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365411,472,041 - 1,476,993 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HEXIM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1218,251,428 - 18,258,295 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11218,251,424 - 18,263,032 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21218,500,139 - 18,509,293 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HEXIM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11661,236,919 - 61,251,203 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1661,236,566 - 61,248,252 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607731,985,644 - 31,996,088 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in HEXIM2
10 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17q21.33-24.2(chr17:36449220-68170214)x3 copy number gain See cases [RCV000050957] Chr17:36449220..68170214 [GRCh38]
Chr17:48563237..65936105 [GRCh37]
Chr17:45918236..63677950 [NCBI36]
Chr17:17q21.33-24.2
pathogenic
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|See cases [RCV000052483] Chr17:36449220..83086677 [GRCh38]
Chr17:58617905..81044553 [GRCh37]
Chr17:55972687..78637842 [NCBI36]
Chr17:17q23.2-25.3
pathogenic
GRCh38/hg38 17q12-21.31(chr17:39199873-45629579)x3 copy number gain See cases [RCV000052479] Chr17:39199873..45629579 [GRCh38]
Chr17:37356126..43706945 [GRCh37]
Chr17:34609652..41062728 [NCBI36]
Chr17:17q12-21.31
pathogenic
GRCh38/hg38 17q21.31-21.33(chr17:44955325-49381173)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052480]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052480]|See cases [RCV000052480] Chr17:44955325..49381173 [GRCh38]
Chr17:43032693..47458535 [GRCh37]
Chr17:40388219..44813534 [NCBI36]
Chr17:17q21.31-21.33
pathogenic
GRCh38/hg38 17q21.31(chr17:44928498-45299730)x1 copy number loss See cases [RCV000053430] Chr17:44928498..45299730 [GRCh38]
Chr17:43005866..43377096 [GRCh37]
Chr17:40361392..40732879 [NCBI36]
Chr17:17q21.31
pathogenic
GRCh38/hg38 17q21.31(chr17:44906235-45220406)x3 copy number gain See cases [RCV000054045] Chr17:44906235..45220406 [GRCh38]
Chr17:42983603..43297773 [GRCh37]
Chr17:40339129..40653556 [NCBI36]
Chr17:17q21.31
uncertain significance
GRCh38/hg38 17q23.1-25.1(chr17:36449220-75053130)x3 copy number gain See cases [RCV000137437] Chr17:36449220..75053130 [GRCh38]
Chr17:57595736..73049225 [GRCh37]
Chr17:54950518..70560820 [NCBI36]
Chr17:17q23.1-25.1
pathogenic
GRCh37/hg19 17q21.31-25.3(chr17:42580684-81085615)x3 copy number gain See cases [RCV000447823] Chr17:42580684..81085615 [GRCh37]
Chr17:17q21.31-25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
NM_001303441.2(HEXIM2):c.592G>C (p.Glu198Gln) single nucleotide variant Inborn genetic diseases [RCV003243745] Chr17:45169540 [GRCh38]
Chr17:43246907 [GRCh37]
Chr17:17q21.31
uncertain significance
GRCh37/hg19 17q21.31(chr17:42649083-43659985)x3 copy number gain See cases [RCV000512371] Chr17:42649083..43659985 [GRCh37]
Chr17:17q21.31
uncertain significance
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3
pathogenic
NM_001303441.2(HEXIM2):c.80C>G (p.Pro27Arg) single nucleotide variant not provided [RCV001813144] Chr17:45169028 [GRCh38]
Chr17:43246395 [GRCh37]
Chr17:17q21.31
uncertain significance
NM_001303441.2(HEXIM2):c.752A>G (p.Glu251Gly) single nucleotide variant Inborn genetic diseases [RCV003297773] Chr17:45169700 [GRCh38]
Chr17:43247067 [GRCh37]
Chr17:17q21.31
uncertain significance
NM_001303441.2(HEXIM2):c.64A>G (p.Lys22Glu) single nucleotide variant Inborn genetic diseases [RCV002707592] Chr17:45162857 [GRCh38]
Chr17:43240224 [GRCh37]
Chr17:17q21.31
uncertain significance
NM_001303441.2(HEXIM2):c.757G>T (p.Ala253Ser) single nucleotide variant Inborn genetic diseases [RCV002916065] Chr17:45169705 [GRCh38]
Chr17:43247072 [GRCh37]
Chr17:17q21.31
uncertain significance
NM_001303441.2(HEXIM2):c.169G>C (p.Asp57His) single nucleotide variant Inborn genetic diseases [RCV002763295] Chr17:45169117 [GRCh38]
Chr17:43246484 [GRCh37]
Chr17:17q21.31
uncertain significance
NM_001303441.2(HEXIM2):c.498C>G (p.His166Gln) single nucleotide variant Inborn genetic diseases [RCV002965910] Chr17:45169446 [GRCh38]
Chr17:43246813 [GRCh37]
Chr17:17q21.31
uncertain significance
NM_001303441.2(HEXIM2):c.281G>T (p.Arg94Leu) single nucleotide variant Inborn genetic diseases [RCV002854717] Chr17:45169229 [GRCh38]
Chr17:43246596 [GRCh37]
Chr17:17q21.31
uncertain significance
NM_001303441.2(HEXIM2):c.793C>T (p.Arg265Trp) single nucleotide variant Inborn genetic diseases [RCV003210145] Chr17:45169741 [GRCh38]
Chr17:43247108 [GRCh37]
Chr17:17q21.31
uncertain significance
NM_001303441.2(HEXIM2):c.836G>T (p.Arg279Leu) single nucleotide variant Inborn genetic diseases [RCV003349483] Chr17:45169784 [GRCh38]
Chr17:43247151 [GRCh37]
Chr17:17q21.31
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2322
Count of miRNA genes:693
Interacting mature miRNAs:814
Transcripts:ENST00000307275, ENST00000585340, ENST00000586681, ENST00000589230, ENST00000591070, ENST00000591576, ENST00000592695, ENST00000593138
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH78214  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371743,247,195 - 43,247,347UniSTSGRCh37
Build 361740,602,978 - 40,603,130RGDNCBI36
Celera1739,956,820 - 39,956,972RGD
Cytogenetic Map17q21.31UniSTS
HuRef1739,009,704 - 39,009,856UniSTS
GeneMap99-GB4 RH Map17329.66UniSTS
SHGC-30043  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371743,247,255 - 43,247,388UniSTSGRCh37
Build 361740,603,038 - 40,603,171RGDNCBI36
Celera1739,956,880 - 39,957,013RGD
Cytogenetic Map17q21.31UniSTS
HuRef1739,009,764 - 39,009,897UniSTS
TNG Radiation Hybrid Map1720476.0UniSTS
Stanford-G3 RH Map171923.0UniSTS
NCBI RH Map17586.3UniSTS
GeneMap99-G3 RH Map172424.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 29 7 211 13 72 15 351 347 37 22 443 218 3 335 1
Low 2401 2796 1511 608 1807 448 4004 1760 3616 396 1005 1387 168 1201 2453 3
Below cutoff 2 180 1 1 67 1 86 55 3 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001303436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001303437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001303438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001303439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001303440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001303441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001303442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001303443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001303444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_144608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006721687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011524306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011524307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011524308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017024167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017024170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047435323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047435324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054315017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054315018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054315019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054315020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054315021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA223138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC138150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK056946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW340131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY598322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG696988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI829228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI829844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP209696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP398345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU501076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA312679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN425800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB160394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY007091 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000307275   ⟹   ENSP00000302276
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1745,160,700 - 45,170,040 (+)Ensembl
RefSeq Acc Id: ENST00000585340   ⟹   ENSP00000468251
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1745,160,730 - 45,170,035 (+)Ensembl
RefSeq Acc Id: ENST00000586681   ⟹   ENSP00000465086
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1745,161,094 - 45,170,035 (+)Ensembl
RefSeq Acc Id: ENST00000589230   ⟹   ENSP00000466200
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1745,161,875 - 45,170,035 (+)Ensembl
RefSeq Acc Id: ENST00000591070   ⟹   ENSP00000464807
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1745,161,896 - 45,170,035 (+)Ensembl
RefSeq Acc Id: ENST00000591576   ⟹   ENSP00000465727
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1745,161,895 - 45,170,035 (+)Ensembl
RefSeq Acc Id: ENST00000592695   ⟹   ENSP00000467517
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1745,161,917 - 45,170,035 (+)Ensembl
RefSeq Acc Id: ENST00000593138   ⟹   ENSP00000468773
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1745,161,078 - 45,170,035 (+)Ensembl
RefSeq Acc Id: NM_001303436   ⟹   NP_001290365
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
CHM1_11743,473,084 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001303437   ⟹   NP_001290366
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
CHM1_11743,473,084 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001303438   ⟹   NP_001290367
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
CHM1_11743,473,084 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001303439   ⟹   NP_001290368
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
CHM1_11743,473,084 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001303440   ⟹   NP_001290369
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,161,875 - 45,170,035 (+)NCBI
CHM1_11743,474,755 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,015,760 - 46,023,932 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001303441   ⟹   NP_001290370
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,161,875 - 45,170,035 (+)NCBI
CHM1_11743,474,755 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,015,760 - 46,023,932 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001303442   ⟹   NP_001290371
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,161,875 - 45,170,035 (+)NCBI
CHM1_11743,474,769 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,015,760 - 46,023,932 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001303443   ⟹   NP_001290372
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,161,875 - 45,170,035 (+)NCBI
CHM1_11743,474,769 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,015,760 - 46,023,932 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001303444   ⟹   NP_001290373
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,161,875 - 45,170,035 (+)NCBI
CHM1_11743,474,769 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,015,760 - 46,023,932 (+)NCBI
Sequence:
RefSeq Acc Id: NM_144608   ⟹   NP_653209
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
GRCh371743,237,502 - 43,247,406 (+)NCBI
Build 361740,594,047 - 40,603,189 (+)NCBI Archive
Celera1739,947,916 - 39,957,031 (+)RGD
HuRef1739,001,091 - 39,009,915 (+)ENTREZGENE
CHM1_11743,473,084 - 43,482,953 (+)NCBI
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006721687   ⟹   XP_006721750
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011524307   ⟹   XP_011522609
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011524308   ⟹   XP_011522610
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047435323   ⟹   XP_047291279
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
RefSeq Acc Id: XM_047435324   ⟹   XP_047291280
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,174 - 45,170,040 (+)NCBI
RefSeq Acc Id: XM_054315017   ⟹   XP_054170992
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
RefSeq Acc Id: XM_054315018   ⟹   XP_054170993
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
RefSeq Acc Id: XM_054315019   ⟹   XP_054170994
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
RefSeq Acc Id: XM_054315020   ⟹   XP_054170995
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
RefSeq Acc Id: XM_054315021   ⟹   XP_054170996
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01746,014,059 - 46,023,937 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001290365 (Get FASTA)   NCBI Sequence Viewer  
  NP_001290366 (Get FASTA)   NCBI Sequence Viewer  
  NP_001290367 (Get FASTA)   NCBI Sequence Viewer  
  NP_001290368 (Get FASTA)   NCBI Sequence Viewer  
  NP_001290369 (Get FASTA)   NCBI Sequence Viewer  
  NP_001290370 (Get FASTA)   NCBI Sequence Viewer  
  NP_001290371 (Get FASTA)   NCBI Sequence Viewer  
  NP_001290372 (Get FASTA)   NCBI Sequence Viewer  
  NP_001290373 (Get FASTA)   NCBI Sequence Viewer  
  NP_653209 (Get FASTA)   NCBI Sequence Viewer  
  XP_006721750 (Get FASTA)   NCBI Sequence Viewer  
  XP_011522609 (Get FASTA)   NCBI Sequence Viewer  
  XP_011522610 (Get FASTA)   NCBI Sequence Viewer  
  XP_047291279 (Get FASTA)   NCBI Sequence Viewer  
  XP_047291280 (Get FASTA)   NCBI Sequence Viewer  
  XP_054170992 (Get FASTA)   NCBI Sequence Viewer  
  XP_054170993 (Get FASTA)   NCBI Sequence Viewer  
  XP_054170994 (Get FASTA)   NCBI Sequence Viewer  
  XP_054170995 (Get FASTA)   NCBI Sequence Viewer  
  XP_054170996 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH03531 (Get FASTA)   NCBI Sequence Viewer  
  AAH12474 (Get FASTA)   NCBI Sequence Viewer  
  AAH25970 (Get FASTA)   NCBI Sequence Viewer  
  AAT06733 (Get FASTA)   NCBI Sequence Viewer  
  BAB71319 (Get FASTA)   NCBI Sequence Viewer  
  EAW51541 (Get FASTA)   NCBI Sequence Viewer  
  EAW51542 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000302276
  ENSP00000302276.2
  ENSP00000464807
  ENSP00000464807.2
  ENSP00000465086
  ENSP00000465086.2
  ENSP00000465727
  ENSP00000465727.1
  ENSP00000466200
  ENSP00000466200.2
  ENSP00000467517
  ENSP00000467517.1
  ENSP00000468251
  ENSP00000468251.2
  ENSP00000468773
  ENSP00000468773.2
GenBank Protein Q96MH2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_653209   ⟸   NM_144608
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006721750   ⟸   XM_006721687
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001290368   ⟸   NM_001303439
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001290366   ⟸   NM_001303437
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001290367   ⟸   NM_001303438
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001290365   ⟸   NM_001303436
- Peptide Label: isoform 2
- UniProtKB: Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001290370   ⟸   NM_001303441
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001290369   ⟸   NM_001303440
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001290372   ⟸   NM_001303443
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001290373   ⟸   NM_001303444
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001290371   ⟸   NM_001303442
- Peptide Label: isoform 1
- UniProtKB: D3DX66 (UniProtKB/Swiss-Prot),   Q96MH2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011522610   ⟸   XM_011524308
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011522609   ⟸   XM_011524307
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSP00000302276   ⟸   ENST00000307275
RefSeq Acc Id: ENSP00000468251   ⟸   ENST00000585340
RefSeq Acc Id: ENSP00000465086   ⟸   ENST00000586681
RefSeq Acc Id: ENSP00000466200   ⟸   ENST00000589230
RefSeq Acc Id: ENSP00000465727   ⟸   ENST00000591576
RefSeq Acc Id: ENSP00000464807   ⟸   ENST00000591070
RefSeq Acc Id: ENSP00000467517   ⟸   ENST00000592695
RefSeq Acc Id: ENSP00000468773   ⟸   ENST00000593138
RefSeq Acc Id: XP_047291279   ⟸   XM_047435323
- Peptide Label: isoform X4
- UniProtKB: Q96MH2 (UniProtKB/Swiss-Prot),   D3DX66 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047291280   ⟸   XM_047435324
- Peptide Label: isoform X4
- UniProtKB: Q96MH2 (UniProtKB/Swiss-Prot),   D3DX66 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054170992   ⟸   XM_054315017
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054170993   ⟸   XM_054315018
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054170995   ⟸   XM_054315020
- Peptide Label: isoform X4
- UniProtKB: Q96MH2 (UniProtKB/Swiss-Prot),   D3DX66 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054170996   ⟸   XM_054315021
- Peptide Label: isoform X4
- UniProtKB: Q96MH2 (UniProtKB/Swiss-Prot),   D3DX66 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054170994   ⟸   XM_054315019
- Peptide Label: isoform X3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q96MH2-F1-model_v2 AlphaFold Q96MH2 1-286 view protein structure

Promoters
RGD ID:6794198
Promoter ID:HG_KWN:26356
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   Jurkat,   K562,   Lymphoblastoid
Transcripts:NM_144608,   UC010DAF.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361740,593,694 - 40,594,194 (+)MPROMDB
RGD ID:6794200
Promoter ID:HG_KWN:26357
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:UC002III.1,   UC002IIJ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361740,594,116 - 40,595,142 (+)MPROMDB
RGD ID:7235321
Promoter ID:EPDNEW_H23406
Type:initiation region
Name:HEXIM2_2
Description:hexamethylene bisacetamide inducible 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23407  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,160,702 - 45,160,762EPDNEW
RGD ID:7235325
Promoter ID:EPDNEW_H23407
Type:initiation region
Name:HEXIM2_1
Description:hexamethylene bisacetamide inducible 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23406  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381745,161,894 - 45,161,954EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:28591 AgrOrtholog
COSMIC HEXIM2 COSMIC
Ensembl Genes ENSG00000168517 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000307275 ENTREZGENE
  ENST00000307275.7 UniProtKB/Swiss-Prot
  ENST00000585340 UniProtKB/TrEMBL
  ENST00000585340.2 UniProtKB/Swiss-Prot
  ENST00000586681 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000586681.6 UniProtKB/Swiss-Prot
  ENST00000589230 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000589230.6 UniProtKB/Swiss-Prot
  ENST00000591070 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000591070.6 UniProtKB/Swiss-Prot
  ENST00000591576 ENTREZGENE
  ENST00000591576.5 UniProtKB/Swiss-Prot
  ENST00000592695 ENTREZGENE
  ENST00000592695.1 UniProtKB/Swiss-Prot
  ENST00000593138 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000593138.6 UniProtKB/Swiss-Prot
Gene3D-CATH 6.10.250.2910 UniProtKB/Swiss-Prot
GTEx ENSG00000168517 GTEx
HGNC ID HGNC:28591 ENTREZGENE
Human Proteome Map HEXIM2 Human Proteome Map
InterPro HEXIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:124790 UniProtKB/Swiss-Prot
NCBI Gene 124790 ENTREZGENE
OMIM 615695 OMIM
PANTHER PTHR13469 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13469:SF3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HEXIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA142671695 PharmGKB
PRINTS HEXIMFAMILY UniProtKB/Swiss-Prot
UniProt D3DX66 ENTREZGENE
  HEXI2_HUMAN UniProtKB/Swiss-Prot
  K7EIM4_HUMAN UniProtKB/TrEMBL
  K7EJA3_HUMAN UniProtKB/TrEMBL
  K7ELS4_HUMAN UniProtKB/TrEMBL
  K7ERG7_HUMAN UniProtKB/TrEMBL
  K7ESM2_HUMAN UniProtKB/TrEMBL
  Q96MH2 ENTREZGENE
UniProt Secondary D3DX66 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-11-29 HEXIM2  HEXIM P-TEFb complex subunit 2    hexamethylene bisacetamide inducible 2  Symbol and/or name change 5135510 APPROVED
2016-04-12 HEXIM2  hexamethylene bisacetamide inducible 2    hexamethylene bis-acetamide inducible 2  Symbol and/or name change 5135510 APPROVED
2011-08-02 HEXIM2  hexamethylene bis-acetamide inducible 2  HEXIM2  hexamthylene bis-acetamide inducible 2  Symbol and/or name change 5135510 APPROVED