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References
Genomics
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Predicted Targets
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPMLow: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM
alimentary part of gastrointestinal system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | entire extraembryonic component | |
High | ||||||||||||
Medium | 8 | 1 | 2 | 1 | 8 | 11 | ||||||
Low | 18 | 3 | 3 | 1 | 5 | 3 | 1 | 3 | 1 | 14 | 10 | |
Below cutoff | 4 | 1 | 6 | 1 | 7 | 6 | 7 | 8 | 12 | 1 |
Sequence
Nucleotide Sequences
RefSeq Transcripts | NR_030384 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
GenBank Nucleotide | AL031258 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Reference Sequences
RefSeq Acc Id: | ENST00000384847 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NR_030384 | ||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||
Type: | NON-CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
Clinical Variants
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 16p13.3-13.13(chr16:46766-11525516)x3 | copy number gain | See cases [RCV000133780] | Chr16:46766..11525516 [GRCh38] Chr16:96766..11619372 [GRCh37] Chr16:36766..11526873 [NCBI36] Chr16:16p13.3-13.13 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:46766-1544014)x1 | copy number loss | See cases [RCV000134917] | Chr16:46766..1544014 [GRCh38] Chr16:96766..1594015 [GRCh37] Chr16:36766..1534016 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:46766-4247185)x3 | copy number gain | See cases [RCV000136687] | Chr16:46766..4247185 [GRCh38] Chr16:96766..4297186 [GRCh37] Chr16:36766..4237187 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:742199-1019543)x1 | copy number loss | See cases [RCV000137540] | Chr16:742199..1019543 [GRCh38] Chr16:792199..1069543 [GRCh37] Chr16:732200..1009544 [NCBI36] Chr16:16p13.3 |
uncertain significance |
GRCh38/hg38 16p13.3(chr16:46722-1867327)x1 | copy number loss | See cases [RCV000137826] | Chr16:46722..1867327 [GRCh38] Chr16:96722..1917328 [GRCh37] Chr16:36722..1857329 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:46766-882211)x1 | copy number loss | See cases [RCV000137979] | Chr16:46766..882211 [GRCh38] Chr16:96766..932211 [GRCh37] Chr16:36766..872212 [NCBI36] Chr16:16p13.3 |
pathogenic|uncertain significance |
GRCh38/hg38 16p13.3(chr16:412341-925326)x3 | copy number gain | See cases [RCV000139354] | Chr16:412341..925326 [GRCh38] Chr16:462341..975326 [GRCh37] Chr16:402342..915327 [NCBI36] Chr16:16p13.3 |
uncertain significance |
GRCh38/hg38 16p13.3-13.12(chr16:43732-13326806)x3 | copy number gain | See cases [RCV000139166] | Chr16:43732..13326806 [GRCh38] Chr16:93732..13420663 [GRCh37] Chr16:33732..13328164 [NCBI36] Chr16:16p13.3-13.12 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:636673-786508)x3 | copy number gain | See cases [RCV000140337] | Chr16:636673..786508 [GRCh38] Chr16:686673..836508 [GRCh37] Chr16:626674..776509 [NCBI36] Chr16:16p13.3 |
benign |
GRCh38/hg38 16p13.3(chr16:59980-1221651)x1 | copy number loss | See cases [RCV000141384] | Chr16:59980..1221651 [GRCh38] Chr16:109978..1271651 [GRCh37] Chr16:49978..1211652 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:752357-1064093)x1 | copy number loss | See cases [RCV000142765] | Chr16:752357..1064093 [GRCh38] Chr16:802357..1114093 [GRCh37] Chr16:742358..1054094 [NCBI36] Chr16:16p13.3 |
uncertain significance |
GRCh38/hg38 16p13.3-13.11(chr16:666662-15743104)x3 | copy number gain | See cases [RCV000143710] | Chr16:666662..15743104 [GRCh38] Chr16:716662..15836961 [GRCh37] Chr16:656663..15744462 [NCBI36] Chr16:16p13.3-13.11 |
pathogenic |
GRCh38/hg38 16p13.3-13.13(chr16:23141-11296695)x3 | copy number gain | See cases [RCV000052367] | Chr16:23141..11296695 [GRCh38] Chr16:73141..11390552 [GRCh37] Chr16:13141..11298053 [NCBI36] Chr16:16p13.3-13.13 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:29941-2560460)x3 | copy number gain | See cases [RCV000052368] | Chr16:29941..2560460 [GRCh38] Chr16:79941..2610461 [GRCh37] Chr16:19941..2550462 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:46566-1800860)x3 | copy number gain | See cases [RCV000052369] | Chr16:46566..1800860 [GRCh38] Chr16:96566..1850861 [GRCh37] Chr16:36566..1790862 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:46766-3214623)x3 | copy number gain | See cases [RCV000052370] | Chr16:46766..3214623 [GRCh38] Chr16:96766..3264623 [GRCh37] Chr16:36766..3204624 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:23141-1773349)x1 | copy number loss | See cases [RCV000053251] | Chr16:23141..1773349 [GRCh38] Chr16:73141..1823350 [GRCh37] Chr16:13141..1763351 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:23141-1712523)x1 | copy number loss | See cases [RCV000053252] | Chr16:23141..1712523 [GRCh38] Chr16:73141..1762524 [GRCh37] Chr16:13141..1702525 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:46766-1997582)x1 | copy number loss | See cases [RCV000053253] | Chr16:46766..1997582 [GRCh38] Chr16:96766..2047583 [GRCh37] Chr16:36766..1987584 [NCBI36] Chr16:16p13.3 |
pathogenic |
GRCh38/hg38 16p13.3(chr16:105429-1499893)x1 | copy number loss | See cases [RCV000053267] | Chr16:105429..1499893 [GRCh38] Chr16:155427..1549894 [GRCh37] Chr16:95427..1489895 [NCBI36] Chr16:16p13.3 |
pathogenic |
Additional Information
External Database Links
Database | Acc Id | Source(s) |
COSMIC | MIR662 | COSMIC |
Ensembl Genes | ENSG00000207579 | Ensembl, ENTREZGENE |
Ensembl Transcript | ENST00000384847 | ENTREZGENE |
GTEx | ENSG00000207579 | GTEx |
HGNC ID | HGNC:32918 | ENTREZGENE |
Human Proteome Map | MIR662 | Human Proteome Map |
miRBase | MI0003670 | ENTREZGENE |
NCBI Gene | 724032 | ENTREZGENE |
PharmGKB | PA164722958 | PharmGKB |
RNAcentral | URS00006BFF14 | RNACentral |
URS000075C986 | RNACentral |