Pkm-ps10 (pyruvate kinase M1/2, pseudogene 10) - Rat Genome Database

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Gene: Pkm-ps10 (pyruvate kinase M1/2, pseudogene 10) Rattus norvegicus
Analyze
Symbol: Pkm-ps10
Name: pyruvate kinase M1/2, pseudogene 10
RGD ID: 1598338
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC301604; similar to Pyruvate kinase isozyme M2
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8999,271,017 - 99,288,420 (+)NCBIGRCr8
mRatBN7.2991,823,472 - 91,834,122 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0998,378,949 - 98,381,843 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0998,056,462 - 98,059,380 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4990,454,522 - 90,467,167 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera989,374,203 - 89,377,097 (+)NCBICelera
Cytogenetic Map9q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Pkm-ps10
31 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)98636963192058970Rat

Markers in Region
AI227749  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2991,819,006 - 91,819,188 (+)MAPPERmRatBN7.2
Rnor_6.0998,367,061 - 98,367,242NCBIRnor6.0
Rnor_5.0998,044,574 - 98,044,755UniSTSRnor5.0
RGSC_v3.4990,452,894 - 90,453,075UniSTSRGSC3.4
Celera989,362,315 - 89,362,496UniSTS
RH 3.4 Map9785.29UniSTS
Cytogenetic Map9q36UniSTS


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-26727 BioCyc
NCBI Gene 301604 ENTREZGENE
PhenoGen Pkm-ps10 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Pkm-ps10  pyruvate kinase M1/2, pseudogene 10  LOC301604  similar to Pyruvate kinase isozyme M2  Symbol and Name Changed 1299863 APPROVED
2006-11-20 LOC301604  similar to Pyruvate kinase isozyme M2      Symbol and Name status set to provisional 70820 PROVISIONAL