Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tmem253 (transmembrane protein 253) Rattus norvegicus
Analyze
Symbol: Tmem253
Name: transmembrane protein 253
RGD ID: 1597322
Description: Predicted to localize to integral component of membrane. Orthologous to human TMEM253 (transmembrane protein 253); INTERACTS WITH acrylamide; bisphenol A; aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: hypothetical protein LOC690368; LOC690368
Orthologs:
Homo sapiens (human) : TMEM253 (transmembrane protein 253)  HGNC  Alliance
Mus musculus (house mouse) : Tmem253 (transmembrane protein 253)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmem253 (transmembrane protein 253)
Pan paniscus (bonobo/pygmy chimpanzee) : TMEM253 (transmembrane protein 253)
Canis lupus familiaris (dog) : TMEM253 (transmembrane protein 253)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmem253 (transmembrane protein 253)
Sus scrofa (pig) : TMEM253 (transmembrane protein 253)
Chlorocebus sabaeus (African green monkey) : TMEM253 (transmembrane protein 253)
Heterocephalus glaber (naked mole-rat) : Tmem253 (transmembrane protein 253)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01528,413,414 - 28,416,039 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1528,413,461 - 28,415,554 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01532,221,865 - 32,226,503 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41527,445,186 - 27,447,282 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1525,011,020 - 25,013,645 (+)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tmem253
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1597322
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.