Phb1-ps11 (prohibitin 1, pseudogene 11) - Rat Genome Database

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Gene: Phb1-ps11 (prohibitin 1, pseudogene 11) Rattus norvegicus
Analyze
Symbol: Phb1-ps11
Name: prohibitin 1, pseudogene 11
RGD ID: 1597149
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC312111; similar to prohibitin
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X68,034,352 - 68,035,236 (+)NCBIGRCr8
mRatBN7.2X63,994,152 - 63,995,036 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X68,580,922 - 68,585,216 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X69,455,249 - 69,459,551 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X86,375,770 - 86,380,039 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX64,376,844 - 64,390,357 (+)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
70221Bp56Blood pressure QTL 564.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X5704214165612192Rat

Markers in Region
D17S895E  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X63,994,223 - 63,994,321 (+)MAPPERmRatBN7.2
mRatBN7.2X109,378,033 - 109,378,130 (+)MAPPERmRatBN7.2
Rnor_6.0X117,174,168 - 117,174,264NCBIRnor6.0
Rnor_6.0X68,581,019 - 68,581,116NCBIRnor6.0
Rnor_5.0X69,455,354 - 69,455,451UniSTSRnor5.0
Rnor_5.0X117,310,426 - 117,310,522UniSTSRnor5.0
RGSC_v3.4X32,628,269 - 32,628,365UniSTSRGSC3.4
RGSC_v3.4X86,375,842 - 86,375,939UniSTSRGSC3.4
CeleraX64,376,941 - 64,377,038UniSTS
CeleraX108,756,389 - 108,756,485UniSTS
Cytogenetic MapXq14UniSTS
Cytogenetic MapXq31UniSTS


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2158 BioCyc
NCBI Gene 312111 ENTREZGENE
PhenoGen Phb1-ps11 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Phb1-ps11  prohibitin 1, pseudogene 11  LOC312111  similar to prohibitin  Symbol and Name Changed 1299863 APPROVED
2006-11-20 LOC312111  similar to prohibitin      Symbol and Name status set to provisional 70820 PROVISIONAL