LOC680063 (similar to histone 2a) - Rat Genome Database

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Gene: LOC680063 (similar to histone 2a) Rattus norvegicus
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Symbol: LOC680063
Name: similar to histone 2a
RGD ID: 1596825
Description: ENCODES a protein that exhibits protein heterodimerization activity (inferred); FOUND IN nucleosome (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: WITHDRAWN
Also known as: H2A histone; histone H2A type 1-F
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
RGSC_v3.41748,768,351 - 48,771,578 (-)NCBIRGSC3.4rn4RGSC3.4
Cytogenetic Map17q11NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleosome  (IEA)
nucleus  (IEA)

Molecular Function

References

Additional References at PubMed
PMID:2011515   PMID:22871113  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_001055524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide X59961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_001055524   ⟹   XP_001055524
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
RGSC_v3.41748,768,351 - 48,771,578 (-)RGD
Protein Sequences
Protein RefSeqs XP_001055524 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAA42586 (Get FASTA)   NCBI Sequence Viewer  
  Q64598 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_001055524   ⟸   XM_001055524


Additional Information

Database Acc Id Source(s)
Gene3D-CATH 1.10.20.10 UniProtKB/Swiss-Prot
InterPro Histone-fold UniProtKB/Swiss-Prot
  Histone_H2A UniProtKB/Swiss-Prot
  Histone_H2A/H2B/H3 UniProtKB/Swiss-Prot
  Histone_H2A_C UniProtKB/Swiss-Prot
  Histone_H2A_CS UniProtKB/Swiss-Prot
NCBI Gene 680063 ENTREZGENE
Pfam Histone UniProtKB/Swiss-Prot
  Histone_H2A_C UniProtKB/Swiss-Prot
PhenoGen LOC680063 PhenoGen
PRINTS HISTONEH2A UniProtKB/Swiss-Prot
PROSITE HISTONE_H2A UniProtKB/Swiss-Prot
SMART H2A UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47113 UniProtKB/Swiss-Prot
UniProt H2A1F_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-11-20 LOC680063  similar to histone 2a      Symbol and Name status set to provisional 70820 PROVISIONAL