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Gene: Tnfrsf13b (TNF receptor superfamily member 13B) Rattus norvegicus
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Symbol: Tnfrsf13b
Name: TNF receptor superfamily member 13B
RGD ID: 1595998
Description: Predicted to be involved in B cell homeostasis; hematopoietic progenitor cell differentiation; and negative regulation of B cell proliferation. Predicted to localize to external side of plasma membrane and integral component of plasma membrane. Human ortholog(s) of this gene implicated in common variable immunodeficiency. Orthologous to human TNFRSF13B (TNF receptor superfamily member 13B); PARTICIPATES IN syndecan signaling pathway; cytokine mediated signaling pathway; primary immunodeficiency pathway; INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC691719; similar to tumor necrosis factor receptor superfamily, member 13b; tumor necrosis factor receptor superfamily member 13B; tumor necrosis factor receptor superfamily, member 13B
Orthologs:
Homo sapiens (human) : TNFRSF13B (TNF receptor superfamily member 13B)  HGNC  Alliance
Mus musculus (house mouse) : Tnfrsf13b (tumor necrosis factor receptor superfamily, member 13b)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnfrsf13b (TNF receptor superfamily member 13B)
Pan paniscus (bonobo/pygmy chimpanzee) : TNFRSF13B (TNF receptor superfamily member 13B)
Canis lupus familiaris (dog) : TNFRSF13B (TNF receptor superfamily member 13B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnfrsf13b (TNF receptor superfamily member 13B)
Sus scrofa (pig) : TNFRSF13B (TNF receptor superfamily member 13B)
Chlorocebus sabaeus (African green monkey) : TNFRSF13B (TNF receptor superfamily member 13B)
Heterocephalus glaber (naked mole-rat) : Tnfrsf13b (TNF receptor superfamily member 13B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01047,399,834 - 47,422,907 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1047,412,582 - 47,420,951 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01047,171,786 - 47,193,320 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41047,286,663 - 47,295,026 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1045,052,747 - 45,073,875 (+)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tnfrsf13b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1595998
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.