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Gene: Sinhcaf (SIN3-HDAC complex associated factor) Rattus norvegicus
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Symbol: Sinhcaf
Name: SIN3-HDAC complex associated factor
Description: Predicted to be involved in negative regulation of cell differentiation; negative regulation of cell migration; and positive regulation of cell population proliferation. Predicted to localize to the Sin3 complex. Orthologous to human SINHCAF (SIN3-HDAC complex associated factor); INTERACTS WITH 2,3,4,7,8-Pentachlorodibenzofuran; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Fam60a; family with sequence similarity 60, member A; LOC686611; MGC187734; similar to Protein FAM60A (Tera protein)
Orthologs:
Homo sapiens (human) : SINHCAF (SIN3-HDAC complex associated factor)  HGNC  Alliance
Mus musculus (house mouse) : Sinhcaf (SIN3-HDAC complex associated factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sinhcaf (SIN3-HDAC complex associated factor)
Pan paniscus (bonobo/pygmy chimpanzee) : SINHCAF (SIN3-HDAC complex associated factor)
Canis lupus familiaris (dog) : SINHCAF (SIN3-HDAC complex associated factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sinhcaf (SIN3-HDAC complex associated factor)
Sus scrofa (pig) : SINHCAF (SIN3-HDAC complex associated factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04183,401,314 - 183,426,439 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4183,401,318 - 183,426,439 (-)Ensembl
Rnor_5.04247,532,024 - 247,556,126 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera4170,356,442 - 170,381,382 (-)NCBICelera
Cytogenetic Map4q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Sinhcaf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1595037
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.