Gene: Pla2g4cl1 (phospholipase A2, group IVC-like 1) Rattus norvegicus
Analyze
Symbol:
Pla2g4cl1
Name:
phospholipase A2, group IVC-like 1
RGD ID:
1594655
Description:
INTERACTS WITH 1-naphthyl isothiocyanate; glycidol; tetrachloromethane
Type:
protein-coding
Previously known as:
cytosolic phospholipase A2 gamma-like; LOC691813; phospholipase A2, group IVC; Pla2g4c; similar to phospholipase A2, group IVC (cytosolic, calcium-independent)
Latest Assembly:
mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information:
Genome Annotation Status: not in current annotation release
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Rnor_6.0 1 75,591,860 - 75,620,904 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 1 76,895,908 - 76,924,920 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 73,874,474 - 73,943,096 (+) NCBI RGSC3.4 rn4 RGSC3.4 Celera 1 69,676,588 - 69,705,844 (+) NCBI Celera Cytogenetic Map 1 q21 NCBI
References
Additional References at PubMed
Genomics
Position Markers
UniSTS:226084
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 1 74,298,663 - 74,298,801 (+) MAPPER mRatBN7.2 mRatBN7.2 14 95,307,732 - 95,307,870 (-) MAPPER mRatBN7.2 mRatBN7.2 14 95,307,732 - 95,307,870 (+) MAPPER mRatBN7.2 mRatBN7.2 1 74,298,663 - 74,298,801 (-) MAPPER mRatBN7.2 Rnor_6.0 1 75,643,964 - 75,644,101 NCBI Rnor6.0 Rnor_6.0 14 106,061,135 - 106,061,272 NCBI Rnor6.0 Rnor_5.0 1 76,947,978 - 76,948,115 UniSTS Rnor5.0 Rnor_5.0 14 106,127,765 - 106,127,902 UniSTS Rnor5.0 RGSC_v3.4 1 73,925,391 - 73,925,528 UniSTS RGSC3.4 RGSC_v3.4 14 101,923,722 - 101,923,859 UniSTS RGSC3.4 Celera 14 94,321,030 - 94,321,167 UniSTS Celera 1 69,728,745 - 69,728,882 UniSTS Cytogenetic Map 1 q21 UniSTS Cytogenetic Map 14 q22 UniSTS
RH141447
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 14 95,308,909 - 95,309,097 (+) MAPPER mRatBN7.2 mRatBN7.2 1 74,297,493 - 74,297,682 (-) MAPPER mRatBN7.2 mRatBN7.2 1 74,297,493 - 74,297,682 (+) MAPPER mRatBN7.2 Rnor_6.0 1 75,642,794 - 75,642,982 NCBI Rnor6.0 Rnor_6.0 14 106,062,310 - 106,062,497 NCBI Rnor6.0 Rnor_5.0 14 106,128,940 - 106,129,127 UniSTS Rnor5.0 Rnor_5.0 1 76,946,808 - 76,946,996 UniSTS Rnor5.0 RGSC_v3.4 1 73,924,221 - 73,924,409 UniSTS RGSC3.4 RGSC_v3.4 14 101,924,898 - 101,925,085 UniSTS RGSC3.4 Celera 14 94,322,206 - 94,322,393 UniSTS Celera 1 69,727,575 - 69,727,763 UniSTS RH 3.4 Map 14 779.79 UniSTS Cytogenetic Map 1 q21 UniSTS Cytogenetic Map 14 q22 UniSTS
PELI1
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 14 95,308,907 - 95,309,072 (+) MAPPER mRatBN7.2 mRatBN7.2 1 74,297,519 - 74,297,684 (-) MAPPER mRatBN7.2 mRatBN7.2 14 95,308,907 - 95,309,072 (-) MAPPER mRatBN7.2 mRatBN7.2 1 74,297,519 - 74,297,684 (+) MAPPER mRatBN7.2 Rnor_6.0 14 106,062,308 - 106,062,472 NCBI Rnor6.0 Rnor_6.0 1 75,642,820 - 75,642,984 NCBI Rnor6.0 Rnor_5.0 14 106,128,938 - 106,129,102 UniSTS Rnor5.0 Rnor_5.0 1 76,946,834 - 76,946,998 UniSTS Rnor5.0 RGSC_v3.4 1 73,924,247 - 73,924,411 UniSTS RGSC3.4 RGSC_v3.4 14 101,924,896 - 101,925,060 UniSTS RGSC3.4 Celera 14 94,322,204 - 94,322,368 UniSTS Celera 1 69,727,601 - 69,727,765 UniSTS Cytogenetic Map 1 q21 UniSTS
miRNA Target Status
Predicted Target Of
Count of predictions: 29 Count of miRNA genes: 28 Interacting mature miRNAs: 29 Transcripts: ENSRNOT00000033633, ENSRNOT00000058334 Prediction methods: Miranda, Rnahybrid Result types: miRGate_prediction