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Gene: Pepd (peptidase D) Rattus norvegicus
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Symbol: Pepd
Name: peptidase D
RGD ID: 1594571
Description: Predicted to have peptidase activity. Predicted to be involved in collagen catabolic process and proteolysis. Human ortholog(s) of this gene implicated in prolidase deficiency. Orthologous to human PEPD (peptidase D); INTERACTS WITH 2,4-dinitrotoluene; acetamide; bis(2-ethylhexyl) phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: imidodipeptidase; MGC95081; Pepd_mapped; peptidase D (mapped); prolidase; proline dipeptidase; X-Pro dipeptidase; xaa-Pro dipeptidase
Orthologs:
Homo sapiens (human) : PEPD (peptidase D)  HGNC  Alliance
Mus musculus (house mouse) : Pepd (peptidase D)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pepd (peptidase D)
Pan paniscus (bonobo/pygmy chimpanzee) : PEPD (peptidase D)
Canis lupus familiaris (dog) : PEPD (peptidase D)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pepd (peptidase D)
Sus scrofa (pig) : PEPD (peptidase D)
Chlorocebus sabaeus (African green monkey) : PEPD (peptidase D)
Heterocephalus glaber (naked mole-rat) : Pepd (peptidase D)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0190,820,670 - 91,285,128 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0191,925,878 - 91,947,641 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0191,957,678 - 92,027,178 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0192,392,882 - 92,416,063 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4187,421,576 - 87,547,908 (+)NCBIRGSC3.4rn4RGSC3.4
Celera181,897,703 - 82,034,192 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pepd
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1594571
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.