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Gene: Tcf20 (transcription factor 20) Rattus norvegicus
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Symbol: Tcf20
Name: transcription factor 20
RGD ID: 1594486
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to nuclear body. Orthologous to human TCF20 (transcription factor 20); INTERACTS WITH 1-naphthyl isothiocyanate; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: AR1; SPBP; stromelysin-1 platelet-derived growth factor-responsive element binding protein; Tcf20_mapped; transcription factor 20 (mapped)
Orthologs:
Homo sapiens (human) : TCF20 (transcription factor 20)  HGNC  Alliance
Mus musculus (house mouse) : Tcf20 (transcription factor 20)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tcf20 (transcription factor 20)
Pan paniscus (bonobo/pygmy chimpanzee) : TCF20 (transcription factor 20)
Canis lupus familiaris (dog) : TCF20 (transcription factor 20)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tcf20 (transcription factor 20)
Sus scrofa (pig) : TCF20 (transcription factor 20)
Chlorocebus sabaeus (African green monkey) : TCF20 (transcription factor 20)
Heterocephalus glaber (naked mole-rat) : Tcf20 (transcription factor 20)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07123,670,135 - 123,767,797 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7123,671,028 - 123,767,797 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07123,655,097 - 123,753,836 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47120,815,411 - 120,929,716 (-)NCBIRGSC3.4rn4RGSC3.4
Celera7110,269,528 - 110,366,780 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Tcf20
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1594486
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.