Gene: Catsper1 (cation channel, sperm associated 1) Rattus norvegicus
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Symbol: Catsper1
Name: cation channel, sperm associated 1
Description: ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); flagellated sperm motility (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH male infertility (ortholog); spermatogenic failure 7 (ortholog); FOUND IN CatSper complex (ortholog); plasma membrane (ortholog); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog)
AGR Description: Predicted to have voltage-gated calcium channel activity; predicted to be involved in several processes, including calcium ion transport, flagellated sperm motility, and fusion of sperm to egg plasma membrane involved in single fertilization; predicted to localize to the CatSper complex; orthologous to human CATSPER1 (cation channel sperm associated 1).
Merged Description: Predicted to have voltage-gated calcium channel activity; predicted to be involved in several processes, including calcium ion transport, flagellated sperm motility, and fusion of sperm to egg plasma membrane involved in single fertilization; predicted to localize to the CatSper complex; orthologous to human CATSPER1 (cation channel sperm associated 1); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); benzo[a]pyrene (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: cation channel of sperm 1; cation channel sperm-associated protein 1; LOC689349; LOW QUALITY PROTEIN: cation channel sperm-associated protein 1; similar to cation channel of sperm 1
Orthologs:
Homo sapiens (human) : CATSPER1 (cation channel sperm associated 1)  HGNC  Alliance
Mus musculus (house mouse) : Catsper1 (cation channel, sperm associated 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Catsper1 (cation channel sperm associated 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CATSPER1 (cation channel sperm associated 1)
Canis lupus familiaris (dog) : CATSPER1 (cation channel sperm associated 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Catsper1 (cation channel sperm associated 1)
Sus scrofa (pig) : CATSPER1 (cation channel sperm associated 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01220,715,000 - 220,724,235 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01227,644,645 - 227,653,234 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41207,979,161 - 207,987,686 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1200,178,195 - 200,187,563 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
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References - curated
References - uncurated
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Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Catsper1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1593515
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.