Nsa2-ps17 (NSA2 ribosome biogenesis factor, pseudogene 17) - Rat Genome Database

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Gene: Nsa2-ps17 (NSA2 ribosome biogenesis factor, pseudogene 17) Rattus norvegicus
Analyze
Symbol: Nsa2-ps17
Name: NSA2 ribosome biogenesis factor, pseudogene 17
RGD ID: 1593243
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC317618; similar to TGF beta-inducible nuclear protein 1 (L-name-related protein 42) (LNR42)
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X76,744,437 - 76,745,376 (+)NCBIGRCr8
mRatBN7.2X72,671,641 - 72,672,496 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X78,681,139 - 78,681,985 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X78,879,280 - 78,880,127 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X96,739,875 - 96,740,658 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX73,957,949 - 73,958,782 (+)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1890 BioCyc
NCBI Gene 317618 ENTREZGENE
PhenoGen Nsa2-ps17 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Nsa2-ps17  NSA2 ribosome biogenesis factor, pseudogene 17  LOC317618  similar to TGF beta-inducible nuclear protein 1 (L-name-related protein 42) (LNR42)  Symbol and Name Changed 1299863 APPROVED
2006-11-20 LOC317618  similar to TGF beta-inducible nuclear protein 1 (L-name-related protein 42) (LNR42)      Symbol and Name status set to provisional 70820 PROVISIONAL