LOC679129 (similar to Peroxisomal biogenesis factor 19 (Peroxin-19) (Peroxisomal farnesylated protein)) - Rat Genome Database

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Gene: LOC679129 (similar to Peroxisomal biogenesis factor 19 (Peroxin-19) (Peroxisomal farnesylated protein)) Rattus norvegicus
Analyze
Symbol: LOC679129
Name: similar to Peroxisomal biogenesis factor 19 (Peroxin-19) (Peroxisomal farnesylated protein)
RGD ID: 1591865
Description:
Type: protein-coding
Previously known as: CBP80/20-dependent translation initiation factor
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Celera1867,743,198 - 67,879,421 (+)NCBICelera
Cytogenetic Map18 NCBI


References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics

Markers in Region
D18Chm62  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21869,245,694 - 69,245,857 (+)MAPPERmRatBN7.2
Rnor_6.01871,801,458 - 71,801,620NCBIRnor6.0
Rnor_5.01870,934,241 - 70,934,403UniSTSRnor5.0
RGSC_v3.41872,558,063 - 72,558,225UniSTSRGSC3.4
Celera1867,824,503 - 67,824,665UniSTS
Cytogenetic Map18 RGD
RH36897  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21869,271,497 - 69,272,167 (+)MAPPERmRatBN7.2
Rnor_6.01871,827,261 - 71,827,930NCBIRnor6.0
Rnor_5.01870,960,044 - 70,960,713UniSTSRnor5.0
RGSC_v3.41872,583,862 - 72,584,531UniSTSRGSC3.4
Celera1867,798,205 - 67,798,874UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008774146   ⟹   XP_008772368
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1867,743,376 - 67,879,421 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008774148   ⟹   XP_008772370
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1867,743,198 - 67,879,421 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008774150   ⟹   XP_008772372
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1867,795,994 - 67,879,421 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008774151   ⟹   XP_008772373
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1867,743,198 - 67,879,421 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008772368 (Get FASTA)   NCBI Sequence Viewer  
  XP_008772370 (Get FASTA)   NCBI Sequence Viewer  
  XP_008772372 (Get FASTA)   NCBI Sequence Viewer  
  XP_008772373 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_008772370   ⟸   XM_008774148
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_008772373   ⟸   XM_008774151
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_008772368   ⟸   XM_008774146
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008772372   ⟸   XM_008774150
- Peptide Label: isoform X2
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene 679129 ENTREZGENE
PhenoGen LOC679129 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-11-20 LOC679129  similar to Peroxisomal biogenesis factor 19 (Peroxin-19) (Peroxisomal farnesylated protein)      Symbol and Name status set to provisional 70820 PROVISIONAL