Ldha-ps16 (lactate dehydrogenase A, pseudogene 16) - Rat Genome Database

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Gene: Ldha-ps16 (lactate dehydrogenase A, pseudogene 16) Rattus norvegicus
Analyze
Symbol: Ldha-ps16
Name: lactate dehydrogenase A, pseudogene 16
RGD ID: 1590231
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC685737; similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X63,323,235 - 63,324,685 (-)NCBIGRCr8
mRatBN7.2X59,329,483 - 59,330,480 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X63,691,477 - 63,692,530 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X64,601,648 - 64,602,651 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X81,953,187 - 81,955,694 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX59,758,690 - 59,759,743 (-)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
70221Bp56Blood pressure QTL 564.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X5704214165612192Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2226 BioCyc
NCBI Gene 685737 ENTREZGENE
PhenoGen Ldha-ps16 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Ldha-ps16  lactate dehydrogenase A, pseudogene 16  LOC685737  similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)  Symbol and Name Changed 1299863 APPROVED
2008-01-09 LOC685737  similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)  LOC683431  similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)  Data merged from RGD:1586859 1643240 APPROVED
2006-11-20 LOC685737  similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC683431  similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M)      Symbol and Name status set to provisional 70820 PROVISIONAL