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Gene: Dera (deoxyribose-phosphate aldolase) Rattus norvegicus
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Symbol: Dera
Name: deoxyribose-phosphate aldolase
Description: Predicted to have deoxyribose-phosphate aldolase activity. Predicted to be involved in carbohydrate catabolic process; deoxyribonucleoside catabolic process; and deoxyribonucleotide catabolic process. Predicted to localize to nucleoplasm. Orthologous to human DERA (deoxyribose-phosphate aldolase); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: 2-deoxyribose-5-phosphate aldolase homolog; 2-deoxyribose-5-phosphate aldolase homolog (C. elegans); 2-deoxyribose-5-phosphate aldolase homolog (C. elegans), pseudogene 1; 2-deoxyribose-5-phosphate aldolase homolog, pseudogene 1; deoxyribose-phosphate aldolase (putative); deoxyribose-phosphate aldolase, pseudogene 1; Dera-ps1; LOC690945; similar to Putative deoxyribose-phosphate aldolase (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA)
Orthologs:
Homo sapiens (human) : DERA (deoxyribose-phosphate aldolase)  HGNC  Alliance
Mus musculus (house mouse) : Dera (deoxyribose-phosphate aldolase (putative))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Dera (deoxyribose-phosphate aldolase)
Pan paniscus (bonobo/pygmy chimpanzee) : DERA (deoxyribose-phosphate aldolase)
Canis lupus familiaris (dog) : DERA (deoxyribose-phosphate aldolase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Dera (deoxyribose-phosphate aldolase)
Sus scrofa (pig) : DERA (deoxyribose-phosphate aldolase)
Chlorocebus sabaeus (African green monkey) : DERA (deoxyribose-phosphate aldolase)
Heterocephalus glaber (naked mole-rat) : Dera (deoxyribose-phosphate aldolase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04171,748,254 - 171,826,414 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4171,748,273 - 171,826,409 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04236,005,130 - 236,082,656 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44174,881,147 - 174,960,828 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4159,239,888 - 159,318,620 (+)NCBICelera
Cytogenetic Map4q44NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Dera
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1589836
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.