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Gene: Samd15 (sterile alpha motif domain containing 15) Rattus norvegicus
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Symbol: Samd15
Name: sterile alpha motif domain containing 15
Description: Orthologous to human SAMD15 (sterile alpha motif domain containing 15); INTERACTS WITH 2,3,7,8-Tetrachlorodibenzofuran; acetamide; atrazine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: hypothetical protein LOC681908; LOC681908; MGC187454; sterile alpha motif domain-containing protein 15; uncharacterized protein LOC681908
Orthologs:
Homo sapiens (human) : SAMD15 (sterile alpha motif domain containing 15)  HGNC  Alliance
Mus musculus (house mouse) : Samd15 (sterile alpha motif domain containing 15)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Samd15 (sterile alpha motif domain containing 15)
Pan paniscus (bonobo/pygmy chimpanzee) : SAMD15 (sterile alpha motif domain containing 15)
Canis lupus familiaris (dog) : SAMD15 (sterile alpha motif domain containing 15)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Samd15 (sterile alpha motif domain containing 15)
Sus scrofa (pig) : SAMD15 (sterile alpha motif domain containing 15)
Chlorocebus sabaeus (African green monkey) : SAMD15 (sterile alpha motif domain containing 15)
Heterocephalus glaber (naked mole-rat) : Samd15 (sterile alpha motif domain containing 15)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06111,223,026 - 111,241,326 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6111,223,026 - 111,241,303 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06120,506,887 - 120,526,580 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera6104,662,735 - 104,681,776 (+)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Samd15
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1589368
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.