Gene: Syndig1l (synapse differentiation inducing 1-like) Rattus norvegicus
Analyze
Symbol: Syndig1l
Name: synapse differentiation inducing 1-like
Description: ASSOCIATED WITH intellectual disability (ortholog); ventricular septal defect (ortholog); FOUND IN Golgi apparatus (ortholog); INTERACTS WITH bisphenol A; copper atom; copper(0)
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: capucin; hypothetical protein LOC685882; LOC685882; synapse differentiation-inducing gene protein 1-like; Tmem90a; transmembrane protein 90A
Orthologs:
Homo sapiens (human) : SYNDIG1L (synapse differentiation inducing 1 like)  HGNC  Alliance
Mus musculus (house mouse) : Syndig1l (synapse differentiation inducing 1 like)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Syndig1l (synapse differentiation inducing 1 like)
Pan paniscus (bonobo/pygmy chimpanzee) : SYNDIG1L (synapse differentiation inducing 1 like)
Canis lupus familiaris (dog) : SYNDIG1L (synapse differentiation inducing 1 like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Syndig1l (synapse differentiation inducing 1 like)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06108,392,837 - 108,415,187 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06117,134,046 - 117,156,622 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46108,719,898 - 108,741,367 (-)NCBIRGSC3.4rn4RGSC3.4
Celera6102,148,305 - 102,169,778 (-)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Syndig1l
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1589004
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE