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Gene: Safb2 (scaffold attachment factor B2) Rattus norvegicus
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Symbol: Safb2
Name: scaffold attachment factor B2
RGD ID: 1588577
Description: Predicted to have identical protein binding activity. Predicted to be involved in Sertoli cell differentiation and regulation of androgen receptor signaling pathway. Predicted to localize to nuclear body. Orthologous to human SAFB2 (scaffold attachment factor B2); INTERACTS WITH bisphenol A; flutamide; (+)-catechin (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC301126; similar to scaffold attachment factor B2
Orthologs:
Homo sapiens (human) : SAFB2 (scaffold attachment factor B2)  HGNC  Alliance
Mus musculus (house mouse) : Safb2 (scaffold attachment factor B2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Safb2 (scaffold attachment factor B2)
Pan paniscus (bonobo/pygmy chimpanzee) : SAFB2 (scaffold attachment factor B2)
Canis lupus familiaris (dog) : SAFB2 (scaffold attachment factor B2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Safb2 (scaffold attachment factor B2)
Sus scrofa (pig) : SAFB2 (scaffold attachment factor B2)
Chlorocebus sabaeus (African green monkey) : SAFB2 (scaffold attachment factor B2)
Heterocephalus glaber (naked mole-rat) : Safb2 (scaffold attachment factor B2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0910,471,618 - 10,492,775 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,471,742 - 10,490,416 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,468,545 - 9,498,447 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera97,096,581 - 7,117,736 (+)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Safb2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1588577
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.