Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pla2g12b (phospholipase A2, group XIIB) Rattus norvegicus
Analyze
Symbol: Pla2g12b
Name: phospholipase A2, group XIIB
RGD ID: 1588484
Description: Predicted to have calcium ion binding activity and phospholipase A2 activity. Predicted to be involved in cholesterol homeostasis; low-density lipoprotein particle remodeling; and triglyceride homeostasis. Predicted to localize to extracellular region. Orthologous to human PLA2G12B (phospholipase A2 group XIIB); PARTICIPATES IN alpha-linolenic acid metabolic pathway; arachidonic acid metabolic pathway; ether lipid metabolic pathway; INTERACTS WITH bisphenol A; endosulfan; 1,2-dimethylhydrazine (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: group XIIB secretory phospholipase A2-like protein; LOC367415; similar to phospholipase A2, group XIIB
Orthologs:
Homo sapiens (human) : PLA2G12B (phospholipase A2 group XIIB)  HGNC  Alliance
Mus musculus (house mouse) : Pla2g12b (phospholipase A2, group XIIB)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pla2g12b (phospholipase A2 group XIIB)
Pan paniscus (bonobo/pygmy chimpanzee) : PLA2G12B (phospholipase A2 group XIIB)
Canis lupus familiaris (dog) : PLA2G12B (phospholipase A2 group XIIB)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pla2g12b (phospholipase A2 group XIIB)
Sus scrofa (pig) : PLA2G12B (phospholipase A2 group XIIB)
Chlorocebus sabaeus (African green monkey) : PLA2G12B (phospholipase A2 group XIIB)
Heterocephalus glaber (naked mole-rat) : Pla2g12b (phospholipase A2 group XIIB)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02028,989,440 - 29,007,967 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2028,989,491 - 29,007,968 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02030,793,778 - 30,812,293 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2028,813,714 - 28,832,140 (+)NCBICelera
Cytogenetic Map20q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pla2g12b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1588484
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.