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Gene: LOC685964 (hypothetical protein LOC685964) Rattus norvegicus
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Symbol: LOC685964
Name: hypothetical protein LOC685964
RGD ID: 1587811
Description: Orthologous to human C3orf22 (chromosome 3 open reading frame 22); INTERACTS WITH bisphenol A; (+)-catechin (ortholog); aflatoxin B1 (ortholog).
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: uncharacterized protein C3orf22 homolog; uncharacterized protein LOC685964
Orthologs:
Homo sapiens (human) : C3orf22 (chromosome 3 open reading frame 22)  HGNC  Alliance
Mus musculus (house mouse) : BC048671 (cDNA sequence BC048671)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102020573 (chromosome unknown open reading frame, human C3orf22)
Pan paniscus (bonobo/pygmy chimpanzee) : C3H3orf22 (chromosome 3 C3orf22 homolog)
Canis lupus familiaris (dog) : C20H3orf22 (chromosome 20 C3orf22 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH3orf22 (chromosome unknown C3orf22 homolog)
Chlorocebus sabaeus (African green monkey) : C22H3orf22 (chromosome 22 open reading frame, human C3orf22)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04122,217,505 - 122,221,999 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4122,217,505 - 122,221,999 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04186,758,874 - 186,763,369 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44124,564,593 - 124,569,087 (+)NCBIRGSC3.4rn4RGSC3.4
Celera4111,742,535 - 111,746,963 (+)NCBICelera
Cytogenetic Map4q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on LOC685964
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1587811
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.