Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tafa3 (TAFA chemokine like family member 3) Rattus norvegicus
Analyze
Symbol: Tafa3
Name: TAFA chemokine like family member 3
Description: Predicted to have receptor ligand activity. Predicted to be involved in negative regulation of microglial cell activation and positive regulation of microglial cell activation. Predicted to localize to the extracellular space. Orthologous to human TAFA3 (TAFA chemokine like family member 3); INTERACTS WITH acrylamide; amphetamine; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Fam19a3; family with sequence similarity 19 (chemokine (C-C motif)-like), member A3; family with sequence similarity 19 member A3, C-C motif chemokine like; LOC691123; similar to TAFA3 protein
Orthologs:
Homo sapiens (human) : TAFA3 (TAFA chemokine like family member 3)  HGNC  Alliance
Mus musculus (house mouse) : Tafa3 (TAFA chemokine like family member 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tafa3 (TAFA chemokine like family member 3)
Pan paniscus (bonobo/pygmy chimpanzee) : TAFA3 (TAFA chemokine like family member 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tafa3 (TAFA chemokine like family member 3)
Sus scrofa (pig) : TAFA3 (TAFA chemokine like family member 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02207,249,000 - 207,258,962 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2207,252,196 - 207,255,824 (-)Ensembl
Rnor_5.02226,668,631 - 226,678,501 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42200,027,578 - 200,031,625 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2184,731,037 - 184,740,999 (-)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tafa3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1587462
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.