Rpl32l2 (ribosomal protein L32 like 2) - Rat Genome Database

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Gene: Rpl32l2 (ribosomal protein L32 like 2) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Rpl32l2
Name: ribosomal protein L32 like 2
RGD ID: 1585830
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in membrane. Predicted to be part of cytosolic large ribosomal subunit.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L32-like; large ribosomal subunit protein eL32-like; LOC680959; ribosomal protein L32 like 1; Rpl32l1; similar to 60S ribosomal protein L32
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X60,033,133 - 60,033,588 (+)NCBIGRCr8
mRatBN7.2X56,057,906 - 56,058,313 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX56,057,205 - 56,058,313 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X60,391,781 - 60,392,218 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX60,391,745 - 60,392,204 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X60,981,339 - 60,981,838 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X78,602,714 - 78,603,121 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX56,550,793 - 56,551,230 (+)NCBICelera
Cytogenetic MapXq22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (IEA)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:65
Count of miRNA genes:53
Interacting mature miRNAs:57
Transcripts:ENSRNOT00000045382
Prediction methods:Microtar, Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 10 43 100 85 83 53 25 53 5 200 87 81 43 54 30

Sequence


Ensembl Acc Id: ENSRNOT00000045382
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX56,057,205 - 56,058,313 (+)Ensembl
Rnor_6.0 EnsemblX60,391,745 - 60,392,204 (+)Ensembl
RefSeq Acc Id: XM_039100381   ⟹   XP_038956309
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X60,033,133 - 60,033,588 (+)NCBI
mRatBN7.2X56,057,906 - 56,058,313 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038956309 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000076569
  ENSRNOP00000076569.1
RefSeq Acc Id: XP_038956309   ⟸   XM_039100381
- UniProtKB: A0A8I5Y5C9 (UniProtKB/TrEMBL)

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2298 BioCyc
Ensembl Genes ENSRNOG00000030346 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000045382 ENTREZGENE
  ENSRNOT00000045382.4 UniProtKB/TrEMBL
InterPro Ribosomal_L32e UniProtKB/TrEMBL
  Ribosomal_L32e_CS UniProtKB/TrEMBL
  Ribosomal_L32e_sf UniProtKB/TrEMBL
NCBI Gene 680959 ENTREZGENE
PANTHER PTHR23413 UniProtKB/TrEMBL
  RIBOSOMAL PROTEIN L32-RELATED UniProtKB/TrEMBL
Pfam Ribosomal_L32e UniProtKB/TrEMBL
PhenoGen Rpl32l2 PhenoGen
PROSITE RIBOSOMAL_L32E UniProtKB/TrEMBL
RatGTEx ENSRNOG00000030346 RatGTEx
SMART Ribosomal_L32e UniProtKB/TrEMBL
Superfamily-SCOP SSF52042 UniProtKB/TrEMBL
UniProt A0A8I5Y5C9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-10-13 Rpl32l2  ribosomal protein L32 like 2  Rpl32l1  ribosomal protein L32 like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2023-09-19 Rpl32l1  ribosomal protein L32 like 1  LOC680959  similar to 60S ribosomal protein L32  Symbol and Name Changed 1299863 APPROVED
2008-01-09 LOC680959  similar to 60S ribosomal protein L32  LOC682072  similar to 60S ribosomal protein L32  Data merged from RGD:1588095 1643240 APPROVED
2006-11-19 LOC680959  similar to 60S ribosomal protein L32      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC682072  similar to 60S ribosomal protein L32      Symbol and Name status set to provisional 70820 PROVISIONAL