Dnpep (aspartyl aminopeptidase) - Rat Genome Database

Name: Dnpep
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Dnpep (aspartyl aminopeptidase) Rattus norvegicus

Analyze

Symbol:

Dnpep

Name:

aspartyl aminopeptidase

RGD ID:

1583848

Description:

Predicted to enable identical protein binding activity. Predicted to be involved in proteolysis. Predicted to be located in cytosol. Orthologous to human DNPEP (aspartyl aminopeptidase); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; bisphenol A.

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DNPEP (aspartyl aminopeptidase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Dnpep (aspartyl aminopeptidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dnpep (aspartyl aminopeptidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DNPEP (aspartyl aminopeptidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	DNPEP (aspartyl aminopeptidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dnpep (aspartyl aminopeptidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DNPEP (aspartyl aminopeptidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DNPEP (aspartyl aminopeptidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dnpep (aspartyl aminopeptidase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	DNPEP (aspartyl aminopeptidase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Dnpep (aspartyl aminopeptidase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	dnpep (aspartyl aminopeptidase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	dnpp-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	APE4	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	dnpep	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	9	76,799,931 - 76,808,841 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	76,783,966 - 76,808,716 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	85,244,379 - 85,253,264 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	90,373,266 - 90,382,151 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	88,759,478 - 88,768,364 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	82,505,529 - 82,514,399 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	82,505,530 - 82,514,399 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	82,274,790 - 82,283,660 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	74,586,544 - 74,595,414 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	74,370,340 - 74,379,210 (-)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alacrima, achalasia, and impaired intellectual development syndrome (ISO)

cerebrotendinous xanthomatosis (ISO)

distal spinal muscular atrophy type 5 (ISO)

genetic disease (ISO)

myofibrillar myopathy 1 (ISO)

Neurodevelopmental Disorders (ISO)

paroxysmal nonkinesigenic dyskinesia 1 (ISO)

polydactyly (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (EXP)

acrolein (ISO)

alpha-pinene (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bilirubin IXalpha (ISO)

bisphenol A (EXP)

bisphenol F (EXP)

cadmium dichloride (ISO)

carbon nanotube (ISO)

choline (ISO)

clofibrate (ISO)

cobalt dichloride (ISO)

cyclosporin A (ISO)

disodium selenite (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

epoxiconazole (ISO)

fenvalerate (EXP)

folic acid (ISO)

furan (EXP)

genistein (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

ivermectin (ISO)

L-methionine (ISO)

lead diacetate (ISO)

lead(0) (ISO)

N-methyl-N-nitrosourea (EXP)

ozone (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

selenium atom (ISO)

sodium arsenite (EXP,ISO)

sodium fluoride (ISO)

Soman (EXP)

titanium dioxide (ISO)

triptonide (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

proteolysis (IEA)

Cellular Component

cytosol (IEA,ISO)

Molecular Function

aminopeptidase activity (IEA)

identical protein binding (ISO)

metallopeptidase activity (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:17692297	PMID:21630459	PMID:22516433	PMID:25416956	PMID:25587118	PMID:25931508

Genomics

Comparative Map Data

Dnpep
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	9	76,799,931 - 76,808,841 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	76,783,966 - 76,808,716 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	85,244,379 - 85,253,264 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	90,373,266 - 90,382,151 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	88,759,478 - 88,768,364 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	82,505,529 - 82,514,399 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	82,505,530 - 82,514,399 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	82,274,790 - 82,283,660 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	74,586,544 - 74,595,414 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	74,370,340 - 74,379,210 (-)	NCBI		Celera
Cytogenetic Map	9	q33	NCBI

DNPEP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	219,372,043 - 219,400,007 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	219,372,043 - 219,400,022 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	220,236,765 - 220,264,729 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	219,946,424 - 219,960,906 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	220,064,421 - 220,078,134	NCBI
Celera	2	214,008,170 - 214,022,675 (-)	NCBI		Celera
Cytogenetic Map	2	q35	NCBI
HuRef	2	212,091,206 - 212,105,674 (-)	NCBI		HuRef
CHM1_1	2	220,244,017 - 220,258,479 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	219,856,797 - 219,884,804 (-)	NCBI		T2T-CHM13v2.0

Dnpep
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	75,285,209 - 75,294,298 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	75,284,540 - 75,294,634 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	75,308,565 - 75,317,654 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	75,307,896 - 75,317,990 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	75,305,140 - 75,314,212 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	75,191,044 - 75,200,785 (-)	NCBI		MGSCv36	mm8
Celera	1	75,799,431 - 75,808,546 (-)	NCBI		Celera
Cytogenetic Map	1	C4	NCBI
cM Map	1	38.71	NCBI

Dnpep
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955453	14,072,924 - 14,082,222 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955453	14,072,924 - 14,082,222 (+)	NCBI	ChiLan1.0	ChiLan1.0

DNPEP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	2B	122,019,247 - 122,045,258 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	106,631,392 - 106,645,100 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	225,221,703 - 225,247,803 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	225,221,703 - 225,247,699 (-)	Ensembl	panpan1.1		panPan2

DNPEP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	25,898,015 - 25,917,997 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	25,863,445 - 25,918,224 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	26,723,846 - 26,743,829 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	25,913,240 - 25,933,226 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	25,913,243 - 25,933,059 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	25,817,570 - 25,837,100 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	25,753,158 - 25,773,113 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	25,773,653 - 25,793,650 (-)	NCBI		UU_Cfam_GSD_1.0

Dnpep
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	175,428,177 - 175,437,438 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936569	1,770,936 - 1,780,507 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936569	1,770,958 - 1,780,224 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DNPEP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	121,391,746 - 121,412,864 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	121,391,746 - 121,404,138 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	134,425,137 - 134,437,835 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DNPEP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	105,266,527 - 105,294,553 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	105,265,757 - 105,282,384 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	94,117,451 - 94,132,386 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dnpep
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624823	5,658,379 - 5,667,010 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624823	5,658,301 - 5,667,010 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Dnpep
28 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	101
Count of miRNA genes:	91
Interacting mature miRNAs:	95
Transcripts:	ENSRNOT00000026799
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	22071169	86369743	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	23754144	83851531	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	25268044	79271759	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	25661188	100929786	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	32535505	77535505	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	32535505	77535505	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	36962359	77814038	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	36962359	92058970	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	36962359	95410867	Rat
6903941	Pur31	Proteinuria QTL 31		0.036	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	9	40194188	85194188	Rat
11353949	Bp393	Blood pressure QTL 393			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	40194188	85194188	Rat
61352	Bp34	Blood pressure QTL 34	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	42495343	79271511	Rat
10058949	Gmadr5	Adrenal mass QTL 5	2	0.014	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	9	42791513	87976209	Rat
11353951	Bp394	Blood pressure QTL 394			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	44649921	89649921	Rat
12879506	Pur33	Proteinuria QTL 33			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	44649921	89649921	Rat
11353957	Bmd92	Bone mineral density QTL 92		0.01	tibia mineral mass (VT:1000283)	volumetric bone mineral density (CMO:0001553)	9	46114199	91114199	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	48598251	93598251	Rat
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	55847841	77026453	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	56627713	78595166	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	9	56627713	78595166	Rat
2303180	Bp333	Blood pressure QTL 333		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	56627713	78595166	Rat
1578760	Cm53	Cardiac mass QTL 53	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	56771635	101771635	Rat
724515	Uae16	Urinary albumin excretion QTL 16	8		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	58163035	100929646	Rat
1300134	Bp185	Blood pressure QTL 185	3.73		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	61381434	104821652	Rat
1581580	Uae34	Urinary albumin excretion QTL 34			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	62072275	96470995	Rat
1578757	Pur6	Proteinuria QTL 6	3.3	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	9	62072275	96470995	Rat
61385	Edpm9	Estrogen-dependent pituitary mass QTL 9	3.43	0.05	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	63869687	108869687	Rat
731171	Glom6	Glomerulus QTL 6	2.8	0.0003	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	9	64573531	109573531	Rat
1354626	Bvd1	Brain ventricular dilatation QTL 1	3.73	0.001	brain ventricle morphology trait (VT:0000822)	hydrocephalus severity score (CMO:0001881)	9	75712843	111552878	Rat

Markers in Region

RH127957

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	76,799,954 - 76,800,749 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	82,505,553 - 82,506,347	NCBI	Rnor6.0
Rnor_5.0	9	82,274,814 - 82,275,608	UniSTS	Rnor5.0
RGSC_v3.4	9	74,586,568 - 74,587,362	UniSTS	RGSC3.4
Celera	9	74,370,364 - 74,371,158	UniSTS
RH 3.4 Map	9	757.4	UniSTS
Cytogenetic Map	9	q33	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	43	57	41	19	41	8	11	74	35	41	11	8
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001024879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006245186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC081986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC097388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ213908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ229070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230742	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000026799 ⟹ ENSRNOP00000026799

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	76,799,933 - 76,808,699 (-)	Ensembl
Rnor_6.0 Ensembl	9	82,505,530 - 82,514,399 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000096092 ⟹ ENSRNOP00000087861

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	76,799,934 - 76,808,365 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000108004 ⟹ ENSRNOP00000089181

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	76,799,938 - 76,808,682 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000108971 ⟹ ENSRNOP00000093633

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	9	76,783,966 - 76,808,716 (-)	Ensembl

RefSeq Acc Id:

NM_001024879 ⟹ NP_001020050

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,799,931 - 76,808,801 (-)	NCBI
Rnor_6.0	9	82,505,529 - 82,514,399 (-)	NCBI
Rnor_5.0	9	82,274,790 - 82,283,660 (-)	NCBI
RGSC_v3.4	9	74,586,544 - 74,595,414 (-)	RGD
Celera	9	74,370,340 - 74,379,210 (-)	RGD

Sequence:

show sequence

CCCGGTGGGGCCTGACGAGAGGCGGAGCCCACAGCTCGGCGAAGGCGAGGCCTGATCAGGAAGG
GAGGAGCGGAGAGGCAGGGGCGGGCCGAAGTCCGACCCCTGGAGAGGAGTGCGGTAGGACTATG
CAGGTGGCCATGAACGGCAGAGCTAGGAAAGAGGCTATCCAGGCCACAGCCAGGGAGCTCATCA
AGTTCGTGAACCGGAGCCCCTCTCCTTTCCATGTCGTGGCCGAGTGTCGCAGCCGCCTACTCCA
GGCTGGCTTCCGTGAACTCAAGGAAACAGAGGGCTGGGATATCTTACCAGAAAACAAGTACTTC
TTAACCAGGAACTCCTCCACCATCATTGCTTTTGCTGTGGGGGGCCAGTATGTTCCTGGCAATG
GCTTCAGCCTCATTGGGGCCCACACGGACAGTCCCTGCCTCCGGGTGAAACGCAAATCTCGCCG
AAGCCAGGTGGGCTACCACCAGGTGGGCGTAGAGACCTATGGTGGTGGGATCTGGAGCACGTGG
TTTGACCGGGACCTGACCTTGGCTGGACGAGTCATTATCAAGTGCCCTACGTCAGGCAGACTGG
AGCAGAGGTTTGTGCATATAGAGCGGCCCATCCTGCGCATCCCGCATCTGGCCATCCATCTGCA
GCGAAATGTCAATGAGAACTTTGGGCCCAACACAGAGATGCACCTAGTCCCTATTCTTGCCACA
GCAGTTCAGGAAGAGCTGGAGAAAGGGACTCCTGAACCAGGGCCTCTCAGTGCTACTGATGAGC
GGCACCACTCAGTCCTCATGTCCCTGCTCTGTACCCATCTGGGACTGAGTCCTGACAACATCAT
GGAGATGGAGCTCTGCCTGGCAGACACCCAGCCTGCAACCCTGGGTGGAGCTTATGAAGAATTC
ATCTTTGCTCCTCGGCTGGACAATCTGCATAGCTGCTTCTGTGCTCTGCAGGCACTGATTGATT
CCTGTGCATCCCCTGCCTCCCTGGCCAGGGAGCCACATGTGCGCATGGTCACGCTCTACGACAA
TGAAGAGGTGGGGTCAGAGAGTGCACAAGGAGCACAGTCTCTGCTGACAGAGCTGATACTACGG
CGCATCTCAGCCTCACCTCAGCGTCTGACTGCCTTCGAGGAAGCCATACCTAAGTCCTTCATGA
TCAGTGCAGACATGGCCCATGCTGTGCACCCAAACTACTCGGACAAGCATGAAGAAAACCATCG
GCCCTTGTTCCATAAGGGTCCTGTGATCAAGGTGAACAGCAAGCAGCGCTACGCCTCTAATGCG
GTGTCTGAGTCCCTGATTCGAGAGGTGGCCGGCCAAGTTGGAGTCCCTCTGCAGGACCTCATGG
TCAGGAATGACTCTCCATGTGGTACCACCATTGGACCTATCTTGGCTTCTCGACTGGGGCTTCG
GGTGCTGGACTTAGGCAGCCCCCAACTGGCCATGCACTCTATCCGGGAGACAGCCTGTACCACT
GGAGTTCTCCAGACCCTCACCCTTTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTGTAAGCCGTA
ACCTCTTGGTGGACTGAGGCCTCTTTCCAAGACTTGTCTTCCACCCCTTTGATTGAGAGGGGAG
GATCTCAGTTTAGCTGATGCTGGGTTATTAAAGTAGATTTTCACTCCAAAAAAAAAAAAAAAAA
AAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006245184 ⟹ XP_006245246

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,799,931 - 76,808,389 (-)	NCBI
Rnor_6.0	9	82,505,529 - 82,513,960 (-)	NCBI
Rnor_5.0	9	82,274,790 - 82,283,660 (-)	NCBI

Sequence:

show sequence

TCCTGCAGTTCCAGGGACAAAACTGGGTGGAGGTCCTCTAGCCTTGGAACTGAACCTTTGAGTC
GAGGGCGGTCGGTCGACCTAGGAATCCACATCTGTCGCTAATGAATCCCCCGGAAGCAGAGGTG
GCCATGAACGGCAGAGCTAGGAAAGAGGCTATCCAGGCCACAGCCAGGGAGCTCATCAAGTTCG
TGAACCGGAGCCCCTCTCCTTTCCATGTCGTGGCCGAGTGTCGCAGCCGCCTACTCCAGGCTGG
CTTCCGTGAACTCAAGGAAACAGAGGGCTGGGATATCTTACCAGAAAACAAGTACTTCTTAACC
AGGAACTCCTCCACCATCATTGCTTTTGCTGTGGGGGGCCAGTATGTTCCTGGCAATGGCTTCA
GCCTCATTGGGGCCCACACGGACAGTCCCTGCCTCCGGGTGAAACGCAAATCTCGCCGAAGCCA
GGTGGGCTACCACCAGGTGGGCGTAGAGACCTATGGTGGTGGGATCTGGAGCACGTGGTTTGAC
CGGGACCTGACCTTGGCTGGACGAGTCATTATCAAGTGCCCTACGTCAGGCAGACTGGAGCAGA
GGTTTGTGCATATAGAGCGGCCCATCCTGCGCATCCCGCATCTGGCCATCCATCTGCAGCGAAA
TGTCAATGAGAACTTTGGGCCCAACACAGAGATGCACCTAGTCCCTATTCTTGCCACAGCAGTT
CAGGAAGAGCTGGAGAAAGGGACTCCTGAACCAGGGCCTCTCAGTGCTACTGATGAGCGGCACC
ACTCAGTCCTCATGTCCCTGCTCTGTACCCATCTGGGACTGAGTCCTGACAACATCATGGAGAT
GGAGCTCTGCCTGGCAGACACCCAGCCTGCAACCCTGGGTGGAGCTTATGAAGAATTCATCTTT
GCTCCTCGGCTGGACAATCTGCATAGCTGCTTCTGTGCTCTGCAGGCACTGATTGATTCCTGTG
CATCCCCTGCCTCCCTGGCCAGGGAGCCACATGTGCGCATGGTCACGCTCTACGACAATGAAGA
GGTGGGGTCAGAGAGTGCACAAGGAGCACAGTCTCTGCTGACAGAGCTGATACTACGGCGCATC
TCAGCCTCACCTCAGCGTCTGACTGCCTTCGAGGAAGCCATACCTAAGTCCTTCATGATCAGTG
CAGACATGGCCCATGCTGTGCACCCAAACTACTCGGACAAGCATGAAGAAAACCATCGGCCCTT
GTTCCATAAGGGTCCTGTGATCAAGGTGAACAGCAAGCAGCGCTACGCCTCTAATGCGGTGTCT
GAGTCCCTGATTCGAGAGGTGGCCGGCCAAGTTGGAGTCCCTCTGCAGGACCTCATGGTCAGGA
ATGACTCTCCATGTGGTACCACCATTGGACCTATCTTGGCTTCTCGACTGGGGCTTCGGGTGCT
GGACTTAGGCAGCCCCCAACTGGCCATGCACTCTATCCGGGAGACAGCCTGTACCACTGGAGTT
CTCCAGACCCTCACCCTTTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTGTAAGCCGTAACCTCT
TGGTGGACTGAGGCCTCTTTCCAAGACTTGTCTTCCACCCCTTTGATTGAGAGGGGAGGATCTC
AGTTTAGCTGATGCTGGGTTATTAAAGTAGATTTTCACTCCA

hide sequence

RefSeq Acc Id:

XM_006245185 ⟹ XP_006245247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,799,931 - 76,808,651 (-)	NCBI
Rnor_6.0	9	82,505,529 - 82,514,261 (-)	NCBI
Rnor_5.0	9	82,274,790 - 82,283,660 (-)	NCBI

Sequence:

show sequence

GCTGCCGCCGGTCGCGCCTCAACTTCGTCTAGACAGCCGGCCGCGCGCCCTTTTGGAGCTACGC
TTAAGGCGGCGCTGAGACGAGCGTACTCCGGTTTCAAAGTAAAACTGAAAGCCTCCGCGGTGGC
CTGACCTTCCGGAAGTCTGAAGGGCTGTCCAGGGACTGACTGGGAGGGAGGACAGGTGGAGTAG
TGCTTTGATTCCGGACACGGTGGCCTTTTCAGATTTGAGGTGGCCATGAACGGCAGAGCTAGGA
AAGAGGCTATCCAGGCCACAGCCAGGGAGCTCATCAAGTTCGTGAACCGGAGCCCCTCTCCTTT
CCATGTCGTGGCCGAGTGTCGCAGCCGCCTACTCCAGGCTGGCTTCCGTGAACTCAAGGAAACA
GAGGGCTGGGATATCTTACCAGAAAACAAGTACTTCTTAACCAGGAACTCCTCCACCATCATTG
CTTTTGCTGTGGGGGGCCAGTATGTTCCTGGCAATGGCTTCAGCCTCATTGGGGCCCACACGGA
CAGTCCCTGCCTCCGGGTGAAACGCAAATCTCGCCGAAGCCAGGTGGGCTACCACCAGGTGGGC
GTAGAGACCTATGGTGGTGGGATCTGGAGCACGTGGTTTGACCGGGACCTGACCTTGGCTGGAC
GAGTCATTATCAAGTGCCCTACGTCAGGCAGACTGGAGCAGAGGTTTGTGCATATAGAGCGGCC
CATCCTGCGCATCCCGCATCTGGCCATCCATCTGCAGCGAAATGTCAATGAGAACTTTGGGCCC
AACACAGAGATGCACCTAGTCCCTATTCTTGCCACAGCAGTTCAGGAAGAGCTGGAGAAAGGGA
CTCCTGAACCAGGGCCTCTCAGTGCTACTGATGAGCGGCACCACTCAGTCCTCATGTCCCTGCT
CTGTACCCATCTGGGACTGAGTCCTGACAACATCATGGAGATGGAGCTCTGCCTGGCAGACACC
CAGCCTGCAACCCTGGGTGGAGCTTATGAAGAATTCATCTTTGCTCCTCGGCTGGACAATCTGC
ATAGCTGCTTCTGTGCTCTGCAGGCACTGATTGATTCCTGTGCATCCCCTGCCTCCCTGGCCAG
GGAGCCACATGTGCGCATGGTCACGCTCTACGACAATGAAGAGGTGGGGTCAGAGAGTGCACAA
GGAGCACAGTCTCTGCTGACAGAGCTGATACTACGGCGCATCTCAGCCTCACCTCAGCGTCTGA
CTGCCTTCGAGGAAGCCATACCTAAGTCCTTCATGATCAGTGCAGACATGGCCCATGCTGTGCA
CCCAAACTACTCGGACAAGCATGAAGAAAACCATCGGCCCTTGTTCCATAAGGGTCCTGTGATC
AAGGTGAACAGCAAGCAGCGCTACGCCTCTAATGCGGTGTCTGAGTCCCTGATTCGAGAGGTGG
CCGGCCAAGTTGGAGTCCCTCTGCAGGACCTCATGGTCAGGAATGACTCTCCATGTGGTACCAC
CATTGGACCTATCTTGGCTTCTCGACTGGGGCTTCGGGTGCTGGACTTAGGCAGCCCCCAACTG
GCCATGCACTCTATCCGGGAGACAGCCTGTACCACTGGAGTTCTCCAGACCCTCACCCTTTTCA
AGGGCTTCTTTGAGCTGTTCCCTTCTGTAAGCCGTAACCTCTTGGTGGACTGAGGCCTCTTTCC
AAGACTTGTCTTCCACCCCTTTGATTGAGAGGGGAGGATCTCAGTTTAGCTGATGCTGGGTTAT
TAAAGTAGATTTTCACTCCA

hide sequence

RefSeq Acc Id:

XM_006245186 ⟹ XP_006245248

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,799,931 - 76,808,674 (-)	NCBI
Rnor_6.0	9	82,505,529 - 82,514,261 (-)	NCBI
Rnor_5.0	9	82,274,790 - 82,283,660 (-)	NCBI

Sequence:

show sequence

GCTGCCGCCGGTCGCGCCTCAACTTCGTCTAGACAGCCGGCCGCGCGCCCTTTTGGAGCTACGC
TTAAGGCGGCGCTGAGACGAGCGTACTCCGGTTTCAAAGTAAAACTGAAAGCCTCCGCGGTGGC
CTGACCTTCCGGAAGTCTGAAGGGCTGTCCAGGGACTGACTGGGAGGGAGGACAGGTGGCCATG
AACGGCAGAGCTAGGAAAGAGGCTATCCAGGCCACAGCCAGGGAGCTCATCAAGTTCGTGAACC
GGAGCCCCTCTCCTTTCCATGTCGTGGCCGAGTGTCGCAGCCGCCTACTCCAGGCTGGCTTCCG
TGAACTCAAGGAAACAGAGGGCTGGGATATCTTACCAGAAAACAAGTACTTCTTAACCAGGAAC
TCCTCCACCATCATTGCTTTTGCTGTGGGGGGCCAGTATGTTCCTGGCAATGGCTTCAGCCTCA
TTGGGGCCCACACGGACAGTCCCTGCCTCCGGGTGAAACGCAAATCTCGCCGAAGCCAGGTGGG
CTACCACCAGGTGGGCGTAGAGACCTATGGTGGTGGGATCTGGAGCACGTGGTTTGACCGGGAC
CTGACCTTGGCTGGACGAGTCATTATCAAGTGCCCTACGTCAGGCAGACTGGAGCAGAGGTTTG
TGCATATAGAGCGGCCCATCCTGCGCATCCCGCATCTGGCCATCCATCTGCAGCGAAATGTCAA
TGAGAACTTTGGGCCCAACACAGAGATGCACCTAGTCCCTATTCTTGCCACAGCAGTTCAGGAA
GAGCTGGAGAAAGGGACTCCTGAACCAGGGCCTCTCAGTGCTACTGATGAGCGGCACCACTCAG
TCCTCATGTCCCTGCTCTGTACCCATCTGGGACTGAGTCCTGACAACATCATGGAGATGGAGCT
CTGCCTGGCAGACACCCAGCCTGCAACCCTGGGTGGAGCTTATGAAGAATTCATCTTTGCTCCT
CGGCTGGACAATCTGCATAGCTGCTTCTGTGCTCTGCAGGCACTGATTGATTCCTGTGCATCCC
CTGCCTCCCTGGCCAGGGAGCCACATGTGCGCATGGTCACGCTCTACGACAATGAAGAGGTGGG
GTCAGAGAGTGCACAAGGAGCACAGTCTCTGCTGACAGAGCTGATACTACGGCGCATCTCAGCC
TCACCTCAGCGTCTGACTGCCTTCGAGGAAGCCATACCTAAGTCCTTCATGATCAGTGCAGACA
TGGCCCATGCTGTGCACCCAAACTACTCGGACAAGCATGAAGAAAACCATCGGCCCTTGTTCCA
TAAGGGTCCTGTGATCAAGGTGAACAGCAAGCAGCGCTACGCCTCTAATGCGGTGTCTGAGTCC
CTGATTCGAGAGGTGGCCGGCCAAGTTGGAGTCCCTCTGCAGGACCTCATGGTCAGGAATGACT
CTCCATGTGGTACCACCATTGGACCTATCTTGGCTTCTCGACTGGGGCTTCGGGTGCTGGACTT
AGGCAGCCCCCAACTGGCCATGCACTCTATCCGGGAGACAGCCTGTACCACTGGAGTTCTCCAG
ACCCTCACCCTTTTCAAGGGCTTCTTTGAGCTGTTCCCTTCTGTAAGCCGTAACCTCTTGGTGG
ACTGAGGCCTCTTTCCAAGACTTGTCTTCCACCCCTTTGATTGAGAGGGGAGGATCTCAGTTTA
GCTGATGCTGGGTTATTAAAGTAGATTTTCACTCCA

hide sequence

RefSeq Acc Id:

XM_039083368 ⟹ XP_038939296

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	9	76,799,931 - 76,808,841 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001020050	(Get FASTA)	NCBI Sequence Viewer
	XP_006245246	(Get FASTA)	NCBI Sequence Viewer
	XP_006245247	(Get FASTA)	NCBI Sequence Viewer
	XP_006245248	(Get FASTA)	NCBI Sequence Viewer
	XP_038939296	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH97388	(Get FASTA)	NCBI Sequence Viewer
	EDL75424	(Get FASTA)	NCBI Sequence Viewer
	EDL75425	(Get FASTA)	NCBI Sequence Viewer
	EDL75426	(Get FASTA)	NCBI Sequence Viewer
	EDL75427	(Get FASTA)	NCBI Sequence Viewer
	EDL75428	(Get FASTA)	NCBI Sequence Viewer
	EDL75429	(Get FASTA)	NCBI Sequence Viewer
	EDL75430	(Get FASTA)	NCBI Sequence Viewer
	EDL75431	(Get FASTA)	NCBI Sequence Viewer
	EDL75432	(Get FASTA)	NCBI Sequence Viewer
	EDL75433	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001020050 ⟸ NM_001024879

- UniProtKB:

Q4V8H5 (UniProtKB/TrEMBL), F7FML8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQVAMNGRARKEAIQATARELIKFVNRSPSPFHVVAECRSRLLQAGFRELKETEGWDILPENKY
FLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRKSRRSQVGYHQVGVETYGGGIWST
WFDRDLTLAGRVIIKCPTSGRLEQRFVHIERPILRIPHLAIHLQRNVNENFGPNTEMHLVPILA
TAVQEELEKGTPEPGPLSATDERHHSVLMSLLCTHLGLSPDNIMEMELCLADTQPATLGGAYEE
FIFAPRLDNLHSCFCALQALIDSCASPASLAREPHVRMVTLYDNEEVGSESAQGAQSLLTELIL
RRISASPQRLTAFEEAIPKSFMISADMAHAVHPNYSDKHEENHRPLFHKGPVIKVNSKQRYASN
AVSESLIREVAGQVGVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACT
TGVLQTLTLFKGFFELFPSVSRNLLVD

hide sequence

RefSeq Acc Id:	XP_006245248 ⟸ XM_006245186
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ABE2 (UniProtKB/TrEMBL), A6JW18 (UniProtKB/TrEMBL), F7FML8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNGRARKEAIQATARELIKFVNRSPSPFHVVAECRSRLLQAGFRELKETEGWDILPENKYFLTR NSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRKSRRSQVGYHQVGVETYGGGIWSTWFDR DLTLAGRVIIKCPTSGRLEQRFVHIERPILRIPHLAIHLQRNVNENFGPNTEMHLVPILATAVQ EELEKGTPEPGPLSATDERHHSVLMSLLCTHLGLSPDNIMEMELCLADTQPATLGGAYEEFIFA PRLDNLHSCFCALQALIDSCASPASLAREPHVRMVTLYDNEEVGSESAQGAQSLLTELILRRIS ASPQRLTAFEEAIPKSFMISADMAHAVHPNYSDKHEENHRPLFHKGPVIKVNSKQRYASNAVSE SLIREVAGQVGVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVL QTLTLFKGFFELFPSVSRNLLVD hide sequence

RefSeq Acc Id:	XP_006245247 ⟸ XM_006245185
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ABE2 (UniProtKB/TrEMBL), A6JW18 (UniProtKB/TrEMBL), F7FML8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNGRARKEAIQATARELIKFVNRSPSPFHVVAECRSRLLQAGFRELKETEGWDILPENKYFLTR NSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRKSRRSQVGYHQVGVETYGGGIWSTWFDR DLTLAGRVIIKCPTSGRLEQRFVHIERPILRIPHLAIHLQRNVNENFGPNTEMHLVPILATAVQ EELEKGTPEPGPLSATDERHHSVLMSLLCTHLGLSPDNIMEMELCLADTQPATLGGAYEEFIFA PRLDNLHSCFCALQALIDSCASPASLAREPHVRMVTLYDNEEVGSESAQGAQSLLTELILRRIS ASPQRLTAFEEAIPKSFMISADMAHAVHPNYSDKHEENHRPLFHKGPVIKVNSKQRYASNAVSE SLIREVAGQVGVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIRETACTTGVL QTLTLFKGFFELFPSVSRNLLVD hide sequence

RefSeq Acc Id:	XP_006245246 ⟸ XM_006245184
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A8L3 (UniProtKB/TrEMBL), A6JW17 (UniProtKB/TrEMBL), F7FML8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNPPEAEVAMNGRARKEAIQATARELIKFVNRSPSPFHVVAECRSRLLQAGFRELKETEGWDIL PENKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSPCLRVKRKSRRSQVGYHQVGVETYGG GIWSTWFDRDLTLAGRVIIKCPTSGRLEQRFVHIERPILRIPHLAIHLQRNVNENFGPNTEMHL VPILATAVQEELEKGTPEPGPLSATDERHHSVLMSLLCTHLGLSPDNIMEMELCLADTQPATLG GAYEEFIFAPRLDNLHSCFCALQALIDSCASPASLAREPHVRMVTLYDNEEVGSESAQGAQSLL TELILRRISASPQRLTAFEEAIPKSFMISADMAHAVHPNYSDKHEENHRPLFHKGPVIKVNSKQ RYASNAVSESLIREVAGQVGVPLQDLMVRNDSPCGTTIGPILASRLGLRVLDLGSPQLAMHSIR ETACTTGVLQTLTLFKGFFELFPSVSRNLLVD hide sequence

RefSeq Acc Id:

ENSRNOP00000026799 ⟸ ENSRNOT00000026799

RefSeq Acc Id:	XP_038939296 ⟸ XM_039083368
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ABE2 (UniProtKB/TrEMBL), A6JW18 (UniProtKB/TrEMBL), F7FML8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000093633 ⟸ ENSRNOT00000108971

RefSeq Acc Id:

ENSRNOP00000089181 ⟸ ENSRNOT00000108004

RefSeq Acc Id:

ENSRNOP00000087861 ⟸ ENSRNOT00000096092

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4V8H5-F1-model_v2	AlphaFold	Q4V8H5	1-475	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1583848	AgrOrtholog
BioCyc Gene	G2FUF-27079	BioCyc
Ensembl Genes	ENSRNOG00000019772	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000026799	ENTREZGENE
	ENSRNOP00000026799.5	UniProtKB/TrEMBL
	ENSRNOP00000087861	ENTREZGENE
	ENSRNOP00000087861.1	UniProtKB/TrEMBL
	ENSRNOP00000089181	ENTREZGENE
	ENSRNOP00000089181.1	UniProtKB/TrEMBL
	ENSRNOP00000093633.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000026799	ENTREZGENE
	ENSRNOT00000026799.6	UniProtKB/TrEMBL
	ENSRNOT00000096092	ENTREZGENE
	ENSRNOT00000096092.1	UniProtKB/TrEMBL
	ENSRNOT00000108004	ENTREZGENE
	ENSRNOT00000108004.1	UniProtKB/TrEMBL
	ENSRNOT00000108971.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.250.10	UniProtKB/TrEMBL
	Zn peptidases	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7128977	IMAGE-MGC_LOAD
	IMAGE:7453069	IMAGE-MGC_LOAD
InterPro	Peptidase_M18	UniProtKB/TrEMBL
	Peptidase_M18_dom2	UniProtKB/TrEMBL
KEGG Report	rno:301529	UniProtKB/TrEMBL
MGC_CLONE	MGC:114431	IMAGE-MGC_LOAD
	MGC:94178	IMAGE-MGC_LOAD
NCBI Gene	301529	ENTREZGENE
PANTHER	ASPARTYL AMINOPEPTIDASE	UniProtKB/TrEMBL
	PTHR28570	UniProtKB/TrEMBL
Pfam	Peptidase_M18	UniProtKB/TrEMBL
PhenoGen	Dnpep	PhenoGen
PRINTS	AMINO1PTASE	UniProtKB/TrEMBL
Superfamily-SCOP	Aminopeptidase/glucanase lid domain	UniProtKB/TrEMBL
	Zn-dependent exopeptidases	UniProtKB/TrEMBL
UniProt	A0A8I6A8L3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ABE2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GKD5_RAT	UniProtKB/TrEMBL
	A6JW17	ENTREZGENE, UniProtKB/TrEMBL
	A6JW18	ENTREZGENE, UniProtKB/TrEMBL
	A6JW21_RAT	UniProtKB/TrEMBL
	A6JW22_RAT	UniProtKB/TrEMBL
	A6JW24_RAT	UniProtKB/TrEMBL
	F7FML8	ENTREZGENE, UniProtKB/TrEMBL
	Q4V8H5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-11-19	Dnpep	aspartyl aminopeptidase			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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Imported Disease Annotations - ClinVar