Rrp12-ps1 (ribosomal RNA processing 12, pseudogene 1) - Rat Genome Database

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Gene: Rrp12-ps1 (ribosomal RNA processing 12, pseudogene 1) Rattus norvegicus
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Symbol: Rrp12-ps1
Name: ribosomal RNA processing 12, pseudogene 1
RGD ID: 1583844
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC302833; similar to CG2691-PA
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X145,057,125 - 145,090,963 (+)NCBIGRCr8
mRatBN7.2X140,045,052 - 140,052,767 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X144,782,152 - 144,787,749 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X144,808,359 - 144,813,851 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X147,268,153 - 147,273,645 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX136,078,513 - 136,084,110 (+)NCBICelera
Cytogenetic MapXq36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Rrp12-ps1
30 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-858 BioCyc
NCBI Gene 302833 ENTREZGENE
PhenoGen Rrp12-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Rrp12-ps1  ribosomal RNA processing 12, pseudogene 1  LOC302833  similar to CG2691-PA  Symbol and Name Changed 1299863 APPROVED
2006-11-19 LOC302833  similar to CG2691-PA      Symbol and Name status set to provisional 70820 PROVISIONAL