Nsdhl-ps1 (NAD(P) dependent steroid dehydrogenase-like, pseudogene 1) - Rat Genome Database

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Gene: Nsdhl-ps1 (NAD(P) dependent steroid dehydrogenase-like, pseudogene 1) Rattus norvegicus
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Symbol: Nsdhl-ps1
Name: NAD(P) dependent steroid dehydrogenase-like, pseudogene 1
RGD ID: 1583507
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC681184; similar to NAD(P) dependent steroid dehydrogenase-like; sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating pseudogene; sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8154,035,313 - 4,036,539 (-)NCBIGRCr8
mRatBN7.2153,986,135 - 3,987,351 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0154,418,599 - 4,420,335 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0158,519,534 - 8,521,270 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera15608,655 - 610,391 (+)NCBICelera
Cytogenetic Map15p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Nsdhl-ps1
4 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15105825014481294Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)colorectal tumor number (CMO:0001794)15226636822711984Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XR_085619
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera15608,739 - 609,790 (+)NCBI
RefSeq Acc Id: XR_086036
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_5.0158,520,135 - 8,521,186 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-14530 BioCyc
NCBI Gene 681184 ENTREZGENE
PhenoGen Nsdhl-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Nsdhl-ps1  NAD(P) dependent steroid dehydrogenase-like, pseudogene 1  LOC681184  similar to NAD(P) dependent steroid dehydrogenase-like  Symbol and Name Changed 1299863 APPROVED
2012-07-05 LOC681184  similar to NAD(P) dependent steroid dehydrogenase-like  LOC681184  similar to NAD(P) dependent steroid dehydrogenase-like  Gene reactivated at release of RGSC5.0 assembly 2298974 REACTIVATED
2008-01-09 LOC681184  similar to NAD(P) dependent steroid dehydrogenase-like  LOC681757  similar to NAD(P) dependent steroid dehydrogenase-like  Data merged from RGD:1591647 1643240 APPROVED
2006-11-20 LOC681757  similar to NAD(P) dependent steroid dehydrogenase-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC681184  similar to NAD(P) dependent steroid dehydrogenase-like      Symbol and Name status set to provisional 70820 PROVISIONAL