Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ccdc28b (coiled coil domain containing 28B) Rattus norvegicus
Analyze
Symbol: Ccdc28b
Name: coiled coil domain containing 28B
Description: Predicted to be involved in cilium assembly. Predicted to localize to the centrosome. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome and Bardet-Biedl syndrome 1. Orthologous to human CCDC28B (coiled-coil domain containing 28B); INTERACTS WITH bisphenol A; dibutyl phthalate; endosulfan.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: coiled-coil domain-containing protein 28B; LOC682445; MGC187579; similar to coiled coil domain containing 28B
Orthologs:
Homo sapiens (human) : CCDC28B (coiled-coil domain containing 28B)  HGNC  Alliance
Mus musculus (house mouse) : Ccdc28b (coiled coil domain containing 28B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccdc28b (coiled-coil domain containing 28B)
Pan paniscus (bonobo/pygmy chimpanzee) : CCDC28B (coiled-coil domain containing 28B)
Canis lupus familiaris (dog) : CCDC28B (coiled-coil domain containing 28B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccdc28b (coiled-coil domain containing 28B)
Sus scrofa (pig) : CCDC28B (coiled-coil domain containing 28B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05147,823,446 - 147,828,449 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05151,552,469 - 151,557,472 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera5140,436,783 - 140,441,786 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ccdc28b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1583447
Created: 2006-11-19
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.