Ssu72-ps2 (Ssu72 RNA polymerase II CTD phosphatase, pseudogene 2) - Rat Genome Database

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Gene: Ssu72-ps2 (Ssu72 RNA polymerase II CTD phosphatase, pseudogene 2) Rattus norvegicus
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Symbol: Ssu72-ps2
Name: Ssu72 RNA polymerase II CTD phosphatase, pseudogene 2
RGD ID: 1582737
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC691577; similar to Ssu72 RNA polymerase II CTD phosphatase homolog
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X5,730,740 - 5,731,325 (+)NCBIGRCr8
mRatBN7.2X3,130,644 - 3,131,229 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X3,417,646 - 3,418,231 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X4,207,749 - 4,208,334 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X14,631,626 - 14,632,211 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX3,686,234 - 3,686,819 (+)NCBICelera
Cytogenetic MapXq11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Ssu72-ps2
1 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
70166Bp65Blood pressure QTL 655.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X144797211374346Rat
634325Bw13Body weight QTL 130body mass (VT:0001259)body weight (CMO:0000012)X144797220991088Rat
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X144812931706553Rat
631204Gluco15Glucose level QTL 150.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X162371522646544Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-3165 BioCyc
NCBI Gene 691577 ENTREZGENE
PhenoGen Ssu72-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Ssu72-ps2  Ssu72 RNA polymerase II CTD phosphatase, pseudogene 2  LOC691577  similar to Ssu72 RNA polymerase II CTD phosphatase homolog  Symbol and Name Changed 1299863 APPROVED
2008-01-09 LOC691577  similar to Ssu72 RNA polymerase II CTD phosphatase homolog  LOC681573  similar to Ssu72 RNA polymerase II CTD phosphatase homolog  Data merged from RGD:1594066 1643240 APPROVED
2006-11-20 LOC681573  similar to Ssu72 RNA polymerase II CTD phosphatase homolog      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC691577  similar to Ssu72 RNA polymerase II CTD phosphatase homolog      Symbol and Name status set to provisional 70820 PROVISIONAL