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Gene: Alkbh6 (alkB homolog 6) Rattus norvegicus
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Symbol: Alkbh6
Name: alkB homolog 6
Description: Predicted to have oxidoreductase activity. Predicted to be involved in oxidation-reduction process. Predicted to localize to the focal adhesion and nucleoplasm. Orthologous to human ALKBH6 (alkB homolog 6); INTERACTS WITH 1,3-dinitrobenzene; 6-propyl-2-thiouracil; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: alkB, alkylation repair homolog 6; alkB, alkylation repair homolog 6 (E. coli); alkylated DNA repair protein alkB homolog 6; alpha-ketoglutarate-dependent dioxygenase alkB homolog 6; LOC292780; MGC112693; probable alpha-ketoglutarate-dependent dioxygenase ABH6; similar to hypothetical protein MGC15677
Orthologs:
Homo sapiens (human) : ALKBH6 (alkB homolog 6)  HGNC  Alliance
Mus musculus (house mouse) : Alkbh6 (alkB homolog 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Alkbh6 (alkB homolog 6)
Pan paniscus (bonobo/pygmy chimpanzee) : ALKBH6 (alkB homolog 6)
Canis lupus familiaris (dog) : ALKBH6 (alkB homolog 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Alkbh6 (alkB homolog 6)
Sus scrofa (pig) : ALKBH6 (alkB homolog 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0188,766,872 - 88,772,243 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0192,094,314 - 92,099,684 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4185,255,190 - 85,260,560 (+)NCBIRGSC3.4rn4RGSC3.4
Celera179,937,451 - 79,942,812 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Alkbh6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1566318
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.