Mbnl3 (muscleblind-like splicing regulator 3) - Rat Genome Database

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Gene: Mbnl3 (muscleblind-like splicing regulator 3) Rattus norvegicus
Analyze
Symbol: Mbnl3
Name: muscleblind-like splicing regulator 3 (Ensembl:muscleblind like splicing factor 3)
RGD ID: 1565834
Description: Predicted to enable RNA binding activity. Predicted to be involved in regulation of alternative mRNA splicing, via spliceosome. Predicted to act upstream of or within negative regulation of myoblast differentiation. Predicted to be active in cytoplasm and nucleoplasm. Orthologous to human MBNL3 (muscleblind like splicing regulator 3); INTERACTS WITH (+)-schisandrin B; 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC302492; muscleblind-like 3; muscleblind-like 3 (Drosophila); muscleblind-like protein 3; RGD1565834; similar to mCHCR
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X130,641,942 - 130,737,179 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX130,648,538 - 130,737,056 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX132,768,378 - 132,818,867 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0X136,350,293 - 136,400,778 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0X133,927,825 - 133,978,302 (-)NCBIRnor_WKY
Rnor_6.0X138,378,674 - 138,473,365 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX138,384,912 - 138,435,391 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X138,432,133 - 138,526,768 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X137,891,633 - 137,941,868 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX129,559,433 - 129,609,914 (-)NCBICelera
Cytogenetic MapXq36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
nucleoplasm  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12297108   PMID:15257297   PMID:22658674   PMID:22681889  


Genomics

Comparative Map Data
Mbnl3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X130,641,942 - 130,737,179 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX130,648,538 - 130,737,056 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX132,768,378 - 132,818,867 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0X136,350,293 - 136,400,778 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0X133,927,825 - 133,978,302 (-)NCBIRnor_WKY
Rnor_6.0X138,378,674 - 138,473,365 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX138,384,912 - 138,435,391 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X138,432,133 - 138,526,768 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X137,891,633 - 137,941,868 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX129,559,433 - 129,609,914 (-)NCBICelera
Cytogenetic MapXq36NCBI
MBNL3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X132,369,320 - 132,490,035 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 EnsemblX132,369,320 - 132,489,968 (-)EnsemblGRCh38hg38GRCh38
GRCh37X131,503,348 - 131,624,063 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X131,339,858 - 131,401,399 (-)NCBINCBI36Build 36hg18NCBI36
CeleraX131,889,747 - 132,010,400 (-)NCBICelera
Cytogenetic MapXq26.2NCBI
HuRefX120,905,795 - 121,027,169 (-)NCBIHuRef
CHM1_1X131,414,910 - 131,535,546 (-)NCBICHM1_1
T2T-CHM13v2.0X130,693,540 - 130,814,705 (-)NCBIT2T-CHM13v2.0
Mbnl3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X50,202,371 - 50,294,867 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX50,206,146 - 50,295,409 (-)EnsemblGRCm39 Ensembl
GRCm38X51,113,494 - 51,205,990 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX51,117,269 - 51,206,532 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X48,466,671 - 48,559,009 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X47,358,121 - 47,450,459 (-)NCBIMGSCv36mm8
CeleraX38,533,098 - 38,627,627 (-)NCBICelera
Cytogenetic MapXA5NCBI
Mbnl3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554732,490,011 - 2,547,495 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554732,449,543 - 2,555,445 (+)NCBIChiLan1.0ChiLan1.0
MBNL3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X131,808,495 - 131,879,019 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX131,816,266 - 131,879,035 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X121,503,423 - 121,621,124 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
MBNL3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X103,257,410 - 103,370,903 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX103,264,542 - 103,327,481 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX89,430,395 - 89,543,885 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X105,117,479 - 105,230,994 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX105,124,613 - 105,187,563 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X102,528,383 - 102,641,864 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X104,403,921 - 104,517,400 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X104,175,327 - 104,289,684 (-)NCBIUU_Cfam_GSD_1.0
Mbnl3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X101,424,765 - 101,541,168 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366912,460,717 - 2,526,437 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049366912,460,409 - 2,526,179 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MBNL3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX108,494,939 - 108,612,875 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X108,488,224 - 108,612,896 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X124,481,415 - 124,648,237 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MBNL3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X107,516,673 - 107,634,106 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX107,525,991 - 107,585,065 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606544,984,685 - 45,106,439 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mbnl3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479712,047,325 - 12,150,449 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479712,039,406 - 12,151,456 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mbnl3
277 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:253
Count of miRNA genes:165
Interacting mature miRNAs:205
Transcripts:ENSRNOT00000043258
Prediction methods:Miranda, Pita, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX112934952138400867Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat

Markers in Region
RH139776  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X130,648,778 - 130,648,978 (+)MAPPERmRatBN7.2
Rnor_6.0X138,385,510 - 138,385,709NCBIRnor6.0
Rnor_5.0X138,438,969 - 138,439,168UniSTSRnor5.0
RGSC_v3.4X137,892,231 - 137,892,430UniSTSRGSC3.4
CeleraX129,560,031 - 129,560,230UniSTS
Cytogenetic MapXq36UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 21 14 11 14 16 25 8
Low 3 31 34 27 8 27 2 2 49 18 16 3 2
Below cutoff 9 2 6 7 20 1 6

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001106949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008773562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000043258   ⟹   ENSRNOP00000039018
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX130,648,538 - 130,737,056 (-)Ensembl
Rnor_6.0 EnsemblX138,384,912 - 138,435,391 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000105545   ⟹   ENSRNOP00000095651
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX130,648,541 - 130,737,005 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000114674   ⟹   ENSRNOP00000080997
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX130,648,541 - 130,737,056 (-)Ensembl
RefSeq Acc Id: NM_001106949   ⟹   NP_001100419
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,648,181 - 130,698,661 (-)NCBI
Rnor_6.0X138,384,912 - 138,435,391 (-)NCBI
Rnor_5.0X138,432,133 - 138,526,768 (-)NCBI
RGSC_v3.4X137,891,633 - 137,941,868 (-)RGD
CeleraX129,559,433 - 129,609,914 (-)RGD
Sequence:
RefSeq Acc Id: XM_039099606   ⟹   XP_038955534
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,027 (-)NCBI
RefSeq Acc Id: XM_039099608   ⟹   XP_038955536
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,026 (-)NCBI
RefSeq Acc Id: XM_039099609   ⟹   XP_038955537
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,027 (-)NCBI
RefSeq Acc Id: XM_039099610   ⟹   XP_038955538
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,027 (-)NCBI
RefSeq Acc Id: XM_039099611   ⟹   XP_038955539
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,023 (-)NCBI
RefSeq Acc Id: XM_039099612   ⟹   XP_038955540
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,027 (-)NCBI
RefSeq Acc Id: XM_039099613   ⟹   XP_038955541
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,025 (-)NCBI
RefSeq Acc Id: XM_039099614   ⟹   XP_038955542
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,027 (-)NCBI
RefSeq Acc Id: XM_039099615   ⟹   XP_038955543
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,027 (-)NCBI
RefSeq Acc Id: XM_039099616   ⟹   XP_038955544
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,027 (-)NCBI
RefSeq Acc Id: XM_039099617   ⟹   XP_038955545
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,736,053 (-)NCBI
RefSeq Acc Id: XM_039099618   ⟹   XP_038955546
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,673,973 (-)NCBI
RefSeq Acc Id: XM_039099619   ⟹   XP_038955547
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,675,996 (-)NCBI
RefSeq Acc Id: XM_039099620   ⟹   XP_038955548
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,029 (-)NCBI
RefSeq Acc Id: XM_039099621   ⟹   XP_038955549
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,676,001 (-)NCBI
RefSeq Acc Id: XM_039099622   ⟹   XP_038955550
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X130,641,942 - 130,737,179 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001100419   ⟸   NM_001106949
- UniProtKB: D3ZQV3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000039018   ⟸   ENSRNOT00000043258
RefSeq Acc Id: XP_038955550   ⟸   XM_039099622
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038955548   ⟸   XM_039099620
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038955544   ⟸   XM_039099616
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038955543   ⟸   XM_039099615
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038955542   ⟸   XM_039099614
- Peptide Label: isoform X8
- UniProtKB: A0A8I5ZQQ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038955540   ⟸   XM_039099612
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038955538   ⟸   XM_039099610
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038955537   ⟸   XM_039099609
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038955534   ⟸   XM_039099606
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038955536   ⟸   XM_039099608
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038955541   ⟸   XM_039099613
- Peptide Label: isoform X7
- UniProtKB: D3ZQV3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038955539   ⟸   XM_039099611
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038955545   ⟸   XM_039099617
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038955549   ⟸   XM_039099621
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038955547   ⟸   XM_039099619
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038955546   ⟸   XM_039099618
- Peptide Label: isoform X11
RefSeq Acc Id: ENSRNOP00000095651   ⟸   ENSRNOT00000105545
RefSeq Acc Id: ENSRNOP00000080997   ⟸   ENSRNOT00000114674
Protein Domains
C3H1-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZQV3-F1-model_v2 AlphaFold D3ZQV3 1-343 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1565834 AgrOrtholog
BioCyc Gene G2FUF-1049 BioCyc
Ensembl Genes ENSRNOG00000002487 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000039018 ENTREZGENE
  ENSRNOP00000039018.3 UniProtKB/TrEMBL
  ENSRNOP00000080997 ENTREZGENE
  ENSRNOP00000080997.1 UniProtKB/TrEMBL
  ENSRNOP00000095651 ENTREZGENE
  ENSRNOP00000095651.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000043258 ENTREZGENE
  ENSRNOT00000043258.4 UniProtKB/TrEMBL
  ENSRNOT00000105545 ENTREZGENE
  ENSRNOT00000105545.1 UniProtKB/TrEMBL
  ENSRNOT00000114674 ENTREZGENE
  ENSRNOT00000114674.1 UniProtKB/TrEMBL
InterPro Znf-CCCH_4 UniProtKB/TrEMBL
  Znf_CCCH UniProtKB/TrEMBL
KEGG Report rno:302492 UniProtKB/TrEMBL
NCBI Gene 302492 ENTREZGENE
Pfam zf-CCCH_4 UniProtKB/TrEMBL
PhenoGen Mbnl3 PhenoGen
PROSITE ZF_C3H1 UniProtKB/TrEMBL
SMART ZnF_C3H1 UniProtKB/TrEMBL
UniProt A0A8I5ZQQ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GLQ8_RAT UniProtKB/TrEMBL
  D3ZQV3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-05 Mbnl3  muscleblind-like splicing regulator 3  Mbnl3  muscleblind-like 3 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Mbnl3  muscleblind-like 3 (Drosophila)   Mbnl3_predicted  muscleblind-like 3 (Drosophila) (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-30 Mbnl3_predicted  muscleblind-like 3 (Drosophila) (predicted)  RGD1565834_predicted  similar to mCHCR (predicted)  Symbol and Name updated 1299863 APPROVED
2006-03-07 RGD1565834_predicted  similar to mCHCR (predicted)  LOC302492  similar to mCHCR  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC302492  similar to mCHCR      Symbol and Name status set to provisional 70820 PROVISIONAL