Gene: Polr1e (RNA polymerase I subunit E) Rattus norvegicus
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Symbol: Polr1e
Name: RNA polymerase I subunit E
Description: ENCODES a protein that exhibits RNA polymerase I general transcription initiation factor binding (ortholog); INVOLVED IN RNA polymerase I preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; purine metabolic pathway; pyrimidine metabolic pathway; FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleus (ortholog); INTERACTS WITH bisphenol A; clofibric acid; coumarin
AGR Description: Predicted to contribute to RNA polymerase I activity; predicted to be involved in RNA polymerase I preinitiation complex assembly; predicted to localize to the RNA polymerase I complex and fibrillar center; orthologous to human POLR1E (RNA polymerase I subunit E).
Merged Description: Predicted to contribute to RNA polymerase I activity; predicted to be involved in RNA polymerase I preinitiation complex assembly; predicted to localize to the RNA polymerase I complex and fibrillar center; orthologous to human POLR1E (RNA polymerase I subunit E); PARTICIPATES IN RNA polymerase I transcription pathway; purine metabolic pathway; pyrimidine metabolic pathway; INTERACTS WITH bisphenol A; clofibric acid; coumarin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA-directed RNA polymerase I subunit RPA49; LOC313245; polymerase (RNA) I associated factor 1; polymerase (RNA) I polypeptide E; polymerase (RNA) I subunit E; Praf1; RGD1565773; similar to RNA polymerase I associated factor (PAF53)
Orthologs:
Homo sapiens (human) : POLR1E (RNA polymerase I subunit E)  HGNC  Alliance
Mus musculus (house mouse) : Polr1e (polymerase (RNA) I polypeptide E)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Polr1e (RNA polymerase I subunit E)
Pan paniscus (bonobo/pygmy chimpanzee) : POLR1E (RNA polymerase I subunit E)
Canis lupus familiaris (dog) : POLR1E (RNA polymerase I subunit E)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Polr1e (RNA polymerase I subunit E)
Sus scrofa (pig) : POLR1E (RNA polymerase I subunit E)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0560,572,573 - 60,588,097 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0565,081,629 - 65,097,153 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4561,581,916 - 61,598,266 (+)NCBIRGSC3.4rn4RGSC3.4
Celera557,848,084 - 57,863,764 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Polr1e
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565773
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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