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Gene: Polr1e (RNA polymerase I subunit E) Rattus norvegicus
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Symbol: Polr1e
Name: RNA polymerase I subunit E
Description: Predicted to contribute to RNA polymerase I activity. Predicted to be involved in RNA polymerase I preinitiation complex assembly; nucleolar large rRNA transcription by RNA polymerase I; and transcription elongation from RNA polymerase I promoter. Predicted to localize to the RNA polymerase I complex; fibrillar center; and nucleoplasm. Orthologous to human POLR1E (RNA polymerase I subunit E); PARTICIPATES IN RNA polymerase I transcription pathway; purine metabolic pathway; pyrimidine metabolic pathway; INTERACTS WITH (+)-schisandrin B; bisphenol A; clofibric acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: DNA-directed RNA polymerase I subunit RPA49; LOC313245; polymerase (RNA) I associated factor 1; polymerase (RNA) I polypeptide E; polymerase (RNA) I subunit E; Praf1; RGD1565773; similar to RNA polymerase I associated factor (PAF53)
Orthologs:
Homo sapiens (human) : POLR1E (RNA polymerase I subunit E)  HGNC  Alliance
Mus musculus (house mouse) : Polr1e (polymerase (RNA) I polypeptide E)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Polr1e (RNA polymerase I subunit E)
Pan paniscus (bonobo/pygmy chimpanzee) : POLR1E (RNA polymerase I subunit E)
Canis lupus familiaris (dog) : POLR1E (RNA polymerase I subunit E)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Polr1e (RNA polymerase I subunit E)
Sus scrofa (pig) : POLR1E (RNA polymerase I subunit E)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0560,572,573 - 60,588,097 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl560,572,577 - 60,588,240 (+)Ensembl
Rnor_5.0565,081,629 - 65,097,153 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4561,581,916 - 61,598,266 (+)NCBIRGSC3.4rn4RGSC3.4
Celera557,848,084 - 57,863,764 (+)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Polr1e
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565773
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.