Gene: Ttf1 (transcription termination factor 1) Rattus norvegicus
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Symbol: Ttf1
Name: transcription termination factor 1
Description: ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); termination of RNA polymerase I transcription (ortholog); transcription initiation from RNA polymerase I promoter (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog); INTERACTS WITH all-trans-retinoic acid; bisphenol A; Bombesin
AGR Description: Predicted to have DNA binding activity and chromatin binding activity; predicted to be involved in chromatin remodeling, termination of RNA polymerase I transcription, and transcription initiation from RNA polymerase I promoter; predicted to localize to the cytosol, nucleolus, and plasma membrane; orthologous to human TTF1 (transcription termination factor 1).
Merged Description: Predicted to have DNA binding activity and chromatin binding activity; predicted to be involved in chromatin remodeling, termination of RNA polymerase I transcription, and transcription initiation from RNA polymerase I promoter; predicted to localize to the cytosol, nucleolus, and plasma membrane; orthologous to human TTF1 (transcription termination factor 1); PARTICIPATES IN RNA polymerase I transcription pathway; INTERACTS WITH all-trans-retinoic acid; bisphenol A; Bombesin.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC499766; RGD1565673; similar to RNA polymerase I transcription termination factor 1; transcription termination factor, RNA polymerase I
Orthologs:
Homo sapiens (human) : TTF1 (transcription termination factor 1)  HGNC  Alliance
Mus musculus (house mouse) : Ttf1 (transcription termination factor, RNA polymerase I)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ttf1 (transcription termination factor 1)
Pan paniscus (bonobo/pygmy chimpanzee) : TTF1 (transcription termination factor 1)
Canis lupus familiaris (dog) : TTF1 (transcription termination factor 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ttf1 (transcription termination factor 1)
Sus scrofa (pig) : TTF1 (transcription termination factor 1)
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Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.037,635,630 - 7,660,153 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0312,984,215 - 13,008,867 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.438,067,017 - 8,086,185 (+)NCBIRGSC3.4rn4RGSC3.4
Celera37,163,853 - 7,188,383 (+)NCBICelera
Cytogenetic Map3p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ttf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565673
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.