Cdk17 (cyclin-dependent kinase 17)

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Gene: Cdk17 (cyclin-dependent kinase 17) Rattus norvegicus

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Symbol:

Cdk17

Name:

cyclin-dependent kinase 17

RGD ID:

1565593

Description:

Predicted to enable cyclin-dependent protein serine/threonine kinase activity. Predicted to be involved in regulation of cell cycle phase transition. Predicted to be active in cytoplasm and nucleus. Orthologous to human CDK17 (cyclin dependent kinase 17); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cell division protein kinase 17; PCTAIRE protein kinase 2; PCTAIRE-motif protein kinase 2; Pctaire2; Pctk2; serine/threonine-protein kinase PCTAIRE-2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CDK17 (cyclin dependent kinase 17)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Cdk17 (cyclin dependent kinase 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cdk17 (cyclin dependent kinase 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CDK17 (cyclin dependent kinase 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CDK17 (cyclin dependent kinase 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cdk17 (cyclin dependent kinase 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CDK17 (cyclin dependent kinase 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CDK17 (cyclin dependent kinase 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cdk17 (cyclin dependent kinase 17)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CDK17 (cyclin dependent kinase 17)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cdk17 (cyclin dependent kinase 17)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cdk17 (cyclin-dependent kinase 17)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	PHO85	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	pct-1	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cdk17	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	cdk16	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	29,570,982 - 29,677,613 (+)	NCBI		GRCr8
mRatBN7.2	7	27,683,890 - 27,765,814 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	27,683,890 - 27,764,910 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	29,674,165 - 29,752,120 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	31,836,421 - 31,914,331 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	31,624,146 - 31,702,002 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	34,001,506 - 34,088,418 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	34,001,506 - 34,079,616 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	34,066,669 - 34,146,696 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	30,194,242 - 30,272,352 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	24,787,187 - 24,864,980 (+)	NCBI		Celera
Cytogenetic Map	7	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

multiple sclerosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2-dimethylhydrazine (ISO)

1-nitropyrene (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acrylamide (EXP)

Aflatoxin B2 alpha (ISO)

alpha-hexachlorocyclohexane (EXP)

amiodarone (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP)

caffeine (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

disodium selenite (ISO)

Enterolactone (ISO)

ethanol (ISO)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

leflunomide (ISO)

oxaliplatin (EXP)

paracetamol (ISO)

pirinixic acid (EXP)

potassium chromate (ISO)

potassium dichromate (ISO)

sodium arsenite (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

urethane (ISO)

valproic acid (ISO)

vanadium atom (ISO)

vanadium(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein phosphorylation (IEA)

regulation of cell cycle (IEA)

Cellular Component

cytoplasm (IBA)

nucleus (IBA)

Molecular Function

ATP binding (IEA)

cyclin-dependent protein serine/threonine kinase activity (IBA)

protein binding (ISO)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9370357	PMID:10727952

Genomics

Comparative Map Data

Cdk17
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	29,570,982 - 29,677,613 (+)	NCBI		GRCr8
mRatBN7.2	7	27,683,890 - 27,765,814 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	27,683,890 - 27,764,910 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	29,674,165 - 29,752,120 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	31,836,421 - 31,914,331 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	31,624,146 - 31,702,002 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	34,001,506 - 34,088,418 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	34,001,506 - 34,079,616 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	34,066,669 - 34,146,696 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	30,194,242 - 30,272,352 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	24,787,187 - 24,864,980 (+)	NCBI		Celera
Cytogenetic Map	7	q13	NCBI

CDK17
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	96,278,225 - 96,400,439 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	96,278,261 - 96,400,480 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	96,672,003 - 96,794,217 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	95,196,171 - 95,318,354 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	95,174,507 - 95,296,691	NCBI
Celera	12	96,338,255 - 96,460,459 (-)	NCBI		Celera
Cytogenetic Map	12	q23.1	NCBI
HuRef	12	93,733,889 - 93,856,707 (-)	NCBI		HuRef
CHM1_1	12	96,637,404 - 96,759,699 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	96,252,431 - 96,374,639 (-)	NCBI		T2T-CHM13v2.0

Cdk17
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	92,996,492 - 93,086,956 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	92,996,737 - 93,102,933 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	93,160,876 - 93,251,094 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	93,160,875 - 93,267,071 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	92,623,621 - 92,704,087 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	92,638,099 - 92,696,882 (+)	NCBI		MGSCv36	mm8
Celera	10	95,144,250 - 95,226,301 (+)	NCBI		Celera
Cytogenetic Map	10	C2	NCBI
cM Map	10	47.89	NCBI

Cdk17
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	32,565,193 - 32,608,564 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	32,565,193 - 32,608,388 (-)	NCBI	ChiLan1.0	ChiLan1.0

CDK17
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	104,347,113 - 104,463,155 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	104,343,499 - 104,459,545 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	93,864,941 - 93,980,914 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	97,284,763 - 97,398,800 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

CDK17
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	36,020,839 - 36,068,863 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	36,023,519 - 36,076,381 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	36,407,522 - 36,517,466 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	36,687,325 - 36,797,317 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	36,686,530 - 36,797,619 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	35,959,224 - 36,069,395 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	36,054,139 - 36,164,035 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	36,317,719 - 36,427,697 (-)	NCBI		UU_Cfam_GSD_1.0

Cdk17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	23,825,901 - 23,917,690 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936507	12,316,510 - 12,399,116 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936507	12,317,746 - 12,409,506 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CDK17
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	87,179,615 - 87,295,167 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	87,180,132 - 87,282,391 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	91,460,942 - 91,501,904 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CDK17
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	91,641,917 - 91,757,925 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	91,640,374 - 91,757,876 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	153,369,630 - 153,485,837 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cdk17
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624750	10,964,010 - 11,052,189 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Cdk17
463 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	275
Count of miRNA genes:	166
Interacting mature miRNAs:	214
Transcripts:	ENSRNOT00000005762
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354644	Spl4	Serum phospholipid level QTL 4	4.9		blood phospholipid amount (VT:0006084)	blood phospholipid level (CMO:0001169)	7	19654317	49753746	Rat
7411569	Bw137	Body weight QTL 137		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	21921195	66921195	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	5329019	50329019	Rat
1578652	Bmd15	Bone mineral density QTL 15	5.2		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	7	9866467	60460686	Rat
1641885	Alcrsp9	Alcohol response QTL 9			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	7	24099606	69099606	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1	44822433	Rat
1549840	Bss5	Bone structure and strength QTL 5	9.8		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	7	24751841	69751841	Rat
10755438	Coatc9	Coat color QTL 9		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	3529280	48529280	Rat
2298547	Neuinf5	Neuroinflammation QTL 5	3.7		nervous system integrity trait (VT:0010566)	spinal cord Cd74 protein level (CMO:0002131)	7	9462246	58265113	Rat
10059592	Kidm45	Kidney mass QTL 45	3.95	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	7573985	52573985	Rat
2317047	Wbc4	White blood cell count QTL 4		0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	7	1	35342956	Rat
10755440	Coatc10	Coat color QTL 10		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	7496499	52496499	Rat
2298550	Neuinf6	Neuroinflammation QTL 6	3.3		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	7	1	27829089	Rat
1354637	Scl30	Serum cholesterol level QTL 30	3.7		blood cholesterol amount (VT:0000180)	blood total cholesterol level (CMO:0000051)	7	19654317	49753746	Rat
724560	Plsm3	Polydactyly-luxate syndrome (PLS) morphotypes QTL 3		0.0003	tibia length (VT:0004357)	tibia length (CMO:0000450)	7	1	34000259	Rat
1354639	Spl5	Serum phospholipid level QTL 5	3.9		blood LDL phospholipid amount (VT:0010505)	blood low density lipoprotein phospholipid level (CMO:0001568)	7	19654317	52888450	Rat
7411566	Bw136	Body weight QTL 136	10.4	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	1	31962314	Rat
10755451	Coatc11	Coat color QTL 11		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	17944357	62944357	Rat
2317059	Aia15	Adjuvant induced arthritis QTL 15	2.46		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	7	17004598	62004598	Rat
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	44782185	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	9462246	98011544	Rat
2290372	Gluco33	Glucose level QTL 33	2.71		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	20555705	29891047	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	924703	115097879	Rat
9590142	Scort5	Serum corticosterone level QTL 5	24.4	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	1	31962314	Rat
1582260	Bw72	Body weight QTL 72	3.2	0.0043	body mass (VT:0001259)	body weight (CMO:0000012)	7	15795565	38073970	Rat
1582261	Bw69	Body weight QTL 69	3.2	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	7	15795565	38073970	Rat
1582262	Bw75	Body weight QTL 75	3	0.0038	body mass (VT:0001259)	body weight (CMO:0000012)	7	15795565	38073970	Rat
70190	Mcs6	Mammary carcinoma susceptibility QTL 6	2.29		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	7	26737401	63902784	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	19654317	84928080	Rat
61369	Mcs2	Mammary carcinoma susceptibility QTL 2	3.38		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	7	19032807	35526300	Rat
738033	Anxrr6	Anxiety related response QTL 6	4.1		exploratory behavior trait (VT:0010471)	percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)	7	15573889	60573889	Rat

Markers in Region

RH143587

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	27,747,972 - 27,748,096 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	34,065,587 - 34,065,710	NCBI	Rnor6.0
Rnor_5.0	7	34,130,750 - 34,130,873	UniSTS	Rnor5.0
RGSC_v3.4	7	30,258,323 - 30,258,446	UniSTS	RGSC3.4
Celera	7	24,850,951 - 24,851,074	UniSTS
RH 3.4 Map	7	190.2	UniSTS
Cytogenetic Map	7	q13	UniSTS

AA859024

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	27,761,245 - 27,761,440 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	34,078,860 - 34,079,054	NCBI	Rnor6.0
Rnor_5.0	7	34,144,023 - 34,144,217	UniSTS	Rnor5.0
RGSC_v3.4	7	30,271,596 - 30,271,790	UniSTS	RGSC3.4
Celera	7	24,864,224 - 24,864,418	UniSTS
RH 3.4 Map	7	187.4	UniSTS
Cytogenetic Map	7	q13	UniSTS

BE116510

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	27,691,415 - 27,691,566 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	34,009,032 - 34,009,182	NCBI	Rnor6.0
Rnor_5.0	7	34,074,195 - 34,074,345	UniSTS	Rnor5.0
RGSC_v3.4	7	30,201,768 - 30,201,918	UniSTS	RGSC3.4
Celera	7	24,794,713 - 24,794,863	UniSTS
RH 3.4 Map	7	187.4	UniSTS
Cytogenetic Map	7	q13	UniSTS

RH138280

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	27,688,866 - 27,689,028 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	34,006,483 - 34,006,644	NCBI	Rnor6.0
Rnor_5.0	7	34,071,646 - 34,071,807	UniSTS	Rnor5.0
RGSC_v3.4	7	30,199,219 - 30,199,380	UniSTS	RGSC3.4
Celera	7	24,792,164 - 24,792,325	UniSTS
RH 3.4 Map	7	187.4	UniSTS
Cytogenetic Map	7	q13	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006241253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001838688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000005762 ⟹ ENSRNOP00000005762

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	27,683,890 - 27,762,002 (+)	Ensembl
Rnor_6.0 Ensembl	7	34,001,506 - 34,079,616 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109496 ⟹ ENSRNOP00000085940

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	27,683,890 - 27,764,910 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110945 ⟹ ENSRNOP00000077965

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	27,683,890 - 27,764,910 (+)	Ensembl

RefSeq Acc Id:

NM_001108082 ⟹ NP_001101552

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	29,570,982 - 29,649,096 (+)	NCBI
mRatBN7.2	7	27,683,890 - 27,762,002 (+)	NCBI
Rnor_6.0	7	34,001,506 - 34,079,616 (+)	NCBI
Rnor_5.0	7	34,066,669 - 34,146,696 (+)	NCBI
RGSC_v3.4	7	30,194,242 - 30,272,352 (+)	RGD
Celera	7	24,787,187 - 24,864,980 (+)	RGD

Sequence:

show sequence

GAGAAAGCAACGCGCACGCAGACGAACGAGAGCGGCAGCTGCGGTCTCCCCAGCGCCCGGCGGT
CCAGCAGCCCGCGCCCCGCCGCCTCGCTCCTCCCCGGCTCCGCTGCCCGGAGTACTGGGCCGTC
CGCGAGGCTCCGCGGCCCGGGAGCCATGTTGAGCGGGGGGCTCGGCCACGCGTGAGGCGGCCGG
CGGCCCTCGCGGAGCGGAAGGCGCGAGAGGGGGAGGCCTGAGCCTGAGGCGCCTCGGCGCGTCC
GCCGCCACCGGACCTGCATCCGCTCGTTCTGCGCGCCCGCCCGCCCGTCCGCCCGGAGCCCGCG
ATCTCCGCACTTGCTGAATTTTTCAAGCCATATCCAGCTGATAGGATGAAAAAGTTTAAGAGGA
GACTGTCCCTCACGCTCAGGGGAAGCCAGACTATTGATGAGTCCCTGTCGGAGCTGGCTGAACA
GATGACCATAGAGGAGAGCAGTAGCAAAGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCA
ACGTCTCACAGCATGCATTCCTTCCTCCATCAGTACACAGGGTCCTTCAAGAAGCCCCCACTGC
GAAGACCCCACAGCGTTATTGGAGGAAGCCTTGGTTCCTTTATGGCAATGCCCAGAAATGGAAG
CAGATTAGATATTGTTCATGAAAATCTGAAAATGGGATCAGATGGTGAGAGTGACCAAGCTTCT
GGGACATCATCTGATGAAGTCCAGTCCCCTACAGGTGTTTGCCTCAGAAATCGTATACATAGAC
GGATCTCGATGGAGGACTTGAATAAGCGGCTGTCGCTGCCTGCAGACATCAGGATACCCGATGG
CTACCTGGAGAAGCTGCAGATCAGCAGCCCGCCCTTCGACCAGCCCATGAGCCGCAGGTCCCGC
AGAGCCTCCTTATCAGAAATTGGGTTTGGGAAAATGGAAACCTACATCAAATTGGAAAAGCTTG
GAGAGGGCACATATGCAACGGTATATAAAGGGAGAAGTAAGTTGACAGAGAACTTGGTGGCATT
AAAAGAGATCCGCTTGGAACACGAAGAAGGTGCACCCTGTACAGCTATAAGAGAAGTTTCACTG
TTAAAGGACTTAAAACATGCAAATATAGTAACGTTGCATGACATCGTTCACACGGACAAGTCTT
TGACTCTGGTCTTTGAGTACCTGGACAAAGACCTGAAGCAGTACATGGACGACTGTGGGAGCAT
CATGAGCATGCACAACGTCAAGCTGTTCCTGTACCAGATTCTCCGTGGTTTGGCATATTGCCAT
AGAAGAAAAGTGTTGCACCGGGACCTGAAACCACAGAACCTCCTCATTAATGAAAGAGGAGAAC
TAAAGCTGGCTGACTTTGGACTAGCCAGAGCCAAGTCAGTCCCCACCAAGACCTACTCAAATGA
AGTTGTCACGCTGTGGTATCGGCCCCCTGACGTGCTTCTTGGTTCCTCGGAGTACTCAACTCAG
ATCGACATGTGGGGAGTTGGCTGCATTTTCTTTGAAATGGCTTCTGGAAGACCACTGTTTCCAG
GGTCAACTGTGGAAGATGAACTGCACTTAATATTTCGACTACTAGGAACTCCATCTCAGGAAAC
TTGGCCAGGTGTTTCTTCAAATGATGAATTCAAGAACTACAACTTCCCAAAATATAAGCCACAA
CCTCTAATTAATCATGCACCCAGGTTAGATTCTGAAGGAATTGAGTTGATAACAAAGTTTCTTC
AGTATGAATCTAAGAAAAGGGCTCCAGCAGAAGAGGCCATGAAACATGTGTACTTCCGAAGTCT
AGGGCCGAGAATACATGCTTTACCAGAAAGCGTATCAATATTCAGTTTGAAAGAGATTCAGTTG
CAAAAGGACCCGGGTTTTCGAAATTCTTCCTATCCAGAGACAGGACATGGGAAGAACAGAAGAC
AGAGCATGCTCTTTTAAGTCTGGTAGCTTGGTCTCAAGCCCAGCCCCAGCCTTTCTTACCAGCC
ATGGACTCAGAGCTGAAGGCAGTCATTTCTTGTGCTGGACTTGGGATCTCCGTGTGTCTGCACT
GTCCTCTTCCCAGTGGAGTCTTTTTATTTCAGACCTACAGATTGTTTTTATATTTCTTGTCACA
GTGTGACAATTTTTTTTTTTTTTTTTGTACAGTTGGTTTTAAGGTCTTCTCTGCCTGTAGAGCC
AGGAGGTTACAGCTCTCAATGTAACTGTGGCTGCAGATTTGTGCAGGACTGAGAAACACAGTGC
ATTATTTATTGTGGAATCATTGCTGCTAAATAACTACTGTCTGTTTATTTAACACAACAGTTGA
ATGCCTGAAGAAGTTGCAGTGGCTTTATTAGATGTGAACGCATCTGTTTCTCCTCACAAATTGT
TTGACTGCTGCATTTCGTTGTTGTTTTGTTTTGTTTGTTTGTTTGTTTTTAAAAAAAATTAAAC
TGCAGTGTTTCCTGGAATGTATATTTAGCTTTGCTTAGCAGTAAAATAAGTGAGCCATCGTGAA
CACTCGAAGTTCGTGCTACTTATAATTTCTTAGGAGCATTGGCCAATAGAGTAGCTGAGAGAGG
GACAGCACCGTGTGTTTGGGAAGCGTGTAATGTGAGGGGCTGAGCCAAGCAAATGAATAGCAGC
CATTTTGGGTTCCCACATCAGACACCAATCAACTAAGAACACCAAGTTATCCATTTTTACCTAT
TCCTCACCTGAGAGATGTCTACTGCCTCTTCGTATGCCTACACTTGATTAACTTTTACACTGTG
CTTTCAGTTAACATTTAACCGTAGAGGTCATTCAAACAGGAAAAGCCTTGCTGCTGTTTGTCTG
AAGCACGTTTCTTTTCCTAGATACTACTTCATTTTGAGGAACAGTTTCTTTCACTTGGGGGCTG
TGTATGTTTCAAATAACGTTCACTTGGAATAACCAGCTGAAAGCTGGACTCTGTCTTTAAATGG
AGCCATGATGAATTAGAAATGAGAAATAAGAGCCCAGAGGACTGCCTTAGCATTGTGGGTATTA
TCTGCTCATCAGAGACACTAACAGTGTAACTTGAATTATGCATGTCCTTGACCATCACAGACAC
TCGGTGTTGGTAACCGTGTCTTAGGCATTCGTGTTCATCGTTAAGGACTATTGGTTAGTGCATC
TTACAACTAGAAATCTTAATTGGTATACTTTGAAATGGTCATGTAAGTTTTTGCCTTATATCAT
GAAAATAGTTATAACTTAATTTTTGTCCTGCCATTCACTGTAAAACATTCAGGGTCCTCTCATT
TCTGTTCAGGAAATCCTGTAGTTTATTGTTTGTTATTTAACAGTATTAAAGTGAGTTTTTGTAT
ATTTTCATTTTAACTTTATTTGTGAATAGTGATTGTGGCATGTTTGGGGATGTTATTTTAATAT
TTCACAATACTGAAATTTTAATTTTTTTTTTTAAAAAAAGAAAGTTCTGGAAGAAACAGATTCA
TGTGTAACAGTGAATATTGGACCACTGCTGCTTTTCACGATTGTCAGCTGGTTTTATGTTAAGC
CCCGTAGCCTAACTGCTGTTATTTCTAACTGACAGACATGTATTAATATTGTACTTTGAAGGTT
ATAAATATTATGTGAAAATTCCTTCCTTCGTTTTGAAATTTATAATAACTAAATCTCTGTGTTA
TATAAAATGTGATCTTTGTGGA

hide sequence

RefSeq Acc Id:

XM_006241253 ⟹ XP_006241315

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	29,616,622 - 29,649,096 (+)	NCBI
mRatBN7.2	7	27,729,666 - 27,762,002 (+)	NCBI
Rnor_6.0	7	34,047,162 - 34,079,606 (+)	NCBI
Rnor_5.0	7	34,066,669 - 34,146,696 (+)	NCBI

Sequence:

show sequence

TTTAATATCTTATATATGTAATTATTACATATTTTACTTAACAGCCTCCGCTGCTGTTATTCTG
CCCTAGATTTACTAAGTCCCCTGAAGGACCTTACTGTAGCAGGGACAGTAATGTGGGAGTGGGT
CAAACTGTCAGTGTTCGAGGTCAGTCCCCAGCAGTCTCTGTCCTTCACCAGGTTGTATTTAACT
GCTGATCTGCATCTGCTTGAATATTCAGCTAGGGACAATAAATAAAGCCTCCGTGGAGGAAGAC
AGCTGCATGTGGAACCTCTACGTTCCTCCAGTTTACCTCGTCTTCATGTAGTGTCTGACAGCCT
GTAAGCTATCCACACATCAAAGAGAGAGAAAAAGCCAGCAGCAGAAGCAGCCTGACGGCTTATA
CAGACTGAGGGGTTATAGACAGGAGTGCCCATTAGCATATTCATGAAGATAGATGCTGGAGCTA
GAATGCTGCCAGAGAGCTGGGATCTGCAGAAAAGAATCAGGTGGGGGTTCTATAACTGAAGAAA
TGGGCAGTGCATCGAGGAGATGGGTTTAGTCCCAGGCGAGACACAGCGAGGAGGATGACCGGTA
AACGGGATGAATTTTTCAAGCCATATCCAGCTGATAGGATGAAAAAGTTTAAGAGGAGACTGTC
CCTCACGCTCAGGGGAAGCCAGACTATTGATGAGTCCCTGTCGGAGCTGGCTGAACAGATGACC
ATAGAGGAGAGCAGTAGCAAAGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCAACGTCTC
ACAGCATGCATTCCTTCCTCCATCAGTACACAGGGTCCTTCAAGAAGCCCCCACTGCGAAGACC
CCACAGCGTTATTGGAGGAAGCCTTGGTTCCTTTATGGCAATGCCCAGAAATGGAAGCAGATTA
GATATTGTTCATGAAAATCTGAAAATGGGATCAGATGGTGAGAGTGACCAAGCTTCTGGGACAT
CATCTGATGAAGTCCAGTCCCCTACAGGTGTTTGCCTCAGAAATCGTATACATAGACGGATCTC
GATGGAGGACTTGAATAAGCGGCTGTCGCTGCCTGCAGACATCAGGATACCCGATGGCTACCTG
GAGAAGCTGCAGATCAGCAGCCCGCCCTTCGACCAGCCCATGAGCCGCAGGTCCCGCAGAGCCT
CCTTATCAGAAATTGGGTTTGGGAAAATGGAAACCTACATCAAATTGGAAAAGCTTGGAGAGGG
CACATATGCAACGGTATATAAAGGGAGAAGTAAGTTGACAGAGAACTTGGTGGCATTAAAAGAG
ATCCGCTTGGAACACGAAGAAGGTGCACCCTGTACAGCTATAAGAGAAGTTTCACTGTTAAAGG
ACTTAAAACATGCAAATATAGTAACGTTGCATGACATCGTTCACACGGACAAGTCTTTGACTCT
GGTCTTTGAGTACCTGGACAAAGACCTGAAGCAGTACATGGACGACTGTGGGAGCATCATGAGC
ATGCACAACGTCAAGCTGTTCCTGTACCAGATTCTCCGTGGTTTGGCATATTGCCATAGAAGAA
AAGTGTTGCACCGGGACCTGAAACCACAGAACCTCCTCATTAATGAAAGAGGAGAACTAAAGCT
GGCTGACTTTGGACTAGCCAGAGCCAAGTCAGTCCCCACCAAGACCTACTCAAATGAAGTTGTC
ACGCTGTGGTATCGGCCCCCTGACGTGCTTCTTGGTTCCTCGGAGTACTCAACTCAGATCGACA
TGTGGGGAGTTGGCTGCATTTTCTTTGAAATGGCTTCTGGAAGACCACTGTTTCCAGGGTCAAC
TGTGGAAGATGAACTGCACTTAATATTTCGACTACTAGGAACTCCATCTCAGGAAACTTGGCCA
GGTGTTTCTTCAAATGATGAATTCAAGAACTACAACTTCCCAAAATATAAGCCACAACCTCTAA
TTAATCATGCACCCAGGTTAGATTCTGAAGGAATTGAGTTGATAACAAAGTTTCTTCAGTATGA
ATCTAAGAAAAGGGCTCCAGCAGAAGAGGCCATGAAACATGTGTACTTCCGAAGTCTAGGGCCG
AGAATACATGCTTTACCAGAAAGCGTATCAATATTCAGTTTGAAAGAGATTCAGTTGCAAAAGG
ACCCGGGTTTTCGAAATTCTTCCTATCCAGAGACAGGACATGGGAAGAACAGAAGACAGAGCAT
GCTCTTTTAAGTCTGGTAGCTTGGTCTCAAGCCCAGCCCCAGCCTTTCTTACCAGCCATGGACT
CAGAGCTGAAGGCAGTCATTTCTTGTGCTGGACTTGGGATCTCCGTGTGTCTGCACTGTCCTCT
TCCCAGTGGAGTCTTTTTATTTCAGACCTACAGATTGTTTTTATATTTCTTGTCACAGTGTGAC
AATTTTTTTTTTTTTTTTTGTACAGTTGGTTTTAAGGTCTTCTCTGCCTGTAGAGCCAGGAGGT
TACAGCTCTCAATGTAACTGTGGCTGCAGATTTGTGCAGGACTGAGAAACACAGTGCATTATTT
ATTGTGGAATCATTGCTGCTAAATAACTACTGTCTGTTTATTTAACACAACAGTTGAATGCCTG
AAGAAGTTGCAGTGGCTTTATTAGATGTGAACGCATCTGTTTCTCCTCACAAATTGTTTGACTG
CTGCATTTCGTTGTTGTTTTGTTTTGTTTGTTTGTTTGTTTTTAAAAAAAATTAAACTGCAGTG
TTTCCTGGAATGTATATTTAGCTTTGCTTAGCAGTAAAATAAGTGAGCCATCGTGAACACTCGA
AGTTCGTGCTACTTATAATTTCTTAGGAGCATTGGCCAATAGAGTAGCTGAGAGAGGGACAGCA
CCGTGTGTTTGGGAAGCGTGTAATGTGAGGGGCTGAGCCAAGCAAATGAATAGCAGCCATTTTG
GGTTCCCACATCAGACACCAATCAACTAAGAACACCAAGTTATCCATTTTTACCTATTCCTCAC
CTGAGAGATGTCTACTGCCTCTTCGTATGCCTACACTTGATTAACTTTTACACTGTGCTTTCAG
TTAACATTTAACCGTAGAGGTCATTCAAACAGGAAAAGCCTTGCTGCTGTTTGTCTGAAGCACG
TTTCTTTTCCTAGATACTACTTCATTTTGAGGAACAGTTTCTTTCACTTGGGGGCTGTGTATGT
TTCAAATAACGTTCACTTGGAATAACCAGCTGAAAGCTGGACTCTGTCTTTAAATGGAGCCATG
ATGAATTAGAAATGAGAAATAAGAGCCCAGAGGACTGCCTTAGCATTGTGGGTATTATCTGCTC
ATCAGAGACACTAACAGTGTAACTTGAATTATGCATGTCCTTGACCATCACAGACACTCGGTGT
TGGTAACCGTGTCTTAGGCATTCGTGTTCATCGTTAAGGACTATTGGTTAGTGCATCTTACAAC
TAGAAATCTTAATTGGTATACTTTGAAATGGTCATGTAAGTTTTTGCCTTATATCATGAAAATA
GTTATAACTTAATTTTTGTCCTGCCATTCACTGTAAAACATTCAGGGTCCTCTCATTTCTGTTC
AGGAAATCCTGTAGTTTATTGTTTGTTATTTAACAGTATTAAAGTGAGTTTTTGTATATTTTCA
TTTTAACTTTATTTGTGAATAGTGATTGTGGCATGTTTGGGGATGTTATTTTAATATTTCACAA
TACTGAAATTTTAATTTTTTTTTTTAAAAAAAGAAAGTTCTGGAAGAAACAGATTCATGTGTAA
CAGTGAATATTGGACCACTGCTGCTTTTCACGATTGTCAGCTGGTTTTATGTTAAGCCCCGTAG
CCTAACTGCTGTTATTTCTAACTGACAGACATGTATTAATATTGTACTTTGAAGGTTATAAATA
TTATGTGAAAATTCCTTCCTTCGTTTTGAAATTTATAATAACTAAATCTCTGTGTTATATAAAA
TGTGA

hide sequence

RefSeq Acc Id:

XM_017594835 ⟹ XP_017450324

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	29,618,389 - 29,677,613 (+)	NCBI
mRatBN7.2	7	27,729,659 - 27,765,814 (+)	NCBI
Rnor_6.0	7	34,047,161 - 34,088,418 (+)	NCBI

Sequence:

show sequence

TTTTAATATCTTATATATGTAATTATTACATATTTTACTTAACAGCCTCCGCTGCTGTTATTCT
GCCCTAGATTTACTAAGTCCCCTGAAGGACCTTACTGTAGCAGGGACAGTAATGTGGGAGTGGG
TCAAACTGTCAGTGTTCGAGGTCAGTCCCCAGCAGTCTCTGTCCTTCACCAGGTTGTATTTAAC
TGCTGATCTGCATCTGCTTGAATATTCAGCTAGGGACAATAAATAAAGCCTCCGTGGAGGAAGA
CAGCTGCATGTGGAACCTCTACGTTCCTCCAGTTTACCTCGTCTTCATGTAGTGTCTGACAGCC
TGTAAGCTATCCACACATCAAAGAGAGAGAAAAAGCCAGCAGCAGAAGCAGCCTGACGGCTTAT
ACAGACTGAGGGGTTATAGACAGGAGTGCCCATTAGCATATTCATGAAGATAGATGCTGGAGCT
AGAATGCTGCCAGAGAGCTGGGATCTGCAGAAAAGAATCAGGTGGGGGTTCTATAACTGAAGAA
ATGGGCAGTGCATCGAGGAGATGGGTTTAGTCCCAGGCGAGACACAGCGAGGAGGATGACCGGT
AAACGGGATGAATTTTTCAAGCCATATCCAGCTGATAGGATGAAAAAGTTTAAGAGGAGACTGT
CCCTCACGCTCAGGGGAAGCCAGACTATTGATGAGTCCCTGTCGGAGCTGGCTGAACAGATGAC
CATAGAGGAGAGCAGTAGCAAAGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCAACGTCT
CACAGCATGCATTCCTTCCTCCATCAGTACACAGGGTCCTTCAAGAAGCCCCCACTGCGAAGAC
CCCACAGCGTTATTGGAGGAAGCCTTGGTTCCTTTATGGCAATGCCCAGAAATGGAAGCAGATT
AGATATTGTTCATGAAAATCTGAAAATGGGATCAGATGGTGAGAGTGACCAAGCTTCTGGGACA
TCATCTGATGAAGTCCAGTCCCCTACAGGTGTTTGCCTCAGAAATCGTATACATAGACGGATCT
CGATGGAGGACTTGAATAAGCGGCTGTCGCTGCCTGCAGACATCAGGATACCCGATGGCTACCT
GGAGAAGCTGCAGATCAGCAGCCCGCCCTTCGACCAGCCCATGAGCCGCAGGTCCCGCAGAGCC
TCCTTATCAGAAATTGGGTTTGGGAAAATGGAAACCTACATCAAATTGGAAAAGCTTGGAGAGG
GCACATATGCAACGGTATATAAAGGGAGAAGTAAGTTGACAGAGAACTTGGTGGCATTAAAAGA
GATCCGCTTGGAACACGAAGAAGGTGCACCCTGTACAGCTATAAGAGAAGTTTCACTGTTAAAG
GACTTAAAACATGCAAATATAGTAACGTTGCATGACATCGTTCACACGGACAAGTCTTTGACTC
TGGTCTTTGAGTACCTGGACAAAGACCTGAAGCAGTACATGGACGACTGTGGGAGCATCATGAG
CATGCACAACGTCAAGCTGTTCCTGTACCAGATTCTCCGTGGTTTGGCATATTGCCATAGAAGA
AAAGTGTTGCACCGGGACCTGAAACCACAGAACCTCCTCATTAATGAAAGAGGAGAACTAAAGC
TGGCTGACTTTGGACTAGCCAGAGCCAAGTCAGTCCCCACCAAGACCTACTCAAATGAAGTTGT
CACGCTGTGGTATCGGCCCCCTGACGTGCTTCTTGGTTCCTCGGAGTACTCAACTCAGATCGAC
ATGTGGGGAGTTGGCTGCATTTTCTTTGAAATGGCTTCTGGAAGACCACTGTTTCCAGGGTCAA
CTGTGGAAGATGAACTGCACTTAATATTTCGACTACTAGGAACTCCATCTCAGGAAACTTGGCC
AGGTGTTTCTTCAAATGATGAATTCAAGAACTACAACTTCCCAAAATATAAGCCACAACCTCTA
ATTAATCATGCACCCAGGTTAGATTCTGAAGGAATTGAGTTGATAACAAAGTTTCTTCAGTATG
AATCTAAGAAAAGGGCTCCAGCAGAAGAGGCCATGAAACATGTGTACTTCCGAAGTCTAGGGCC
GAGAATACATGCTTTACCAGAAAGCGTATCAATATTCAGTTTGAAAGAGATTCAGTTGCAAAAG
GACCCGGGTTTTCGAAATTCTTCCTATCCAGAGACAGCCCTATCCTGATCCTGGAAACTGCAGA
GAAGAGACTTAAAACTCGGAAAGACTGAACCTGGAATTCTCACAAGCCCCTTAAACTGACAAGG
CCTCCGAAGGTAAGAGGTGCTACGTCACGCAGCGTGTCCAGGGTCCTATGTTACCAGCTGAACT
TGAAAGAATATTTACGTTATAATCCATCTTTCAGACTCATGACTGTCCATGTTGGCTTTTCTTT
ATGCCTTTATGGTATTAACGACATGACGATTACATTATTTATTTCCAGACGTTGAACTCACTAA
AATATTCCATTTCTCCCTCCCAGCTTCTCATAACTATTAATTTACTCTCTGTATCTGTGAAGTT
TCCTATTCTAGATATTTTCTGTCCTGGCAACCGTACCATATTTATATTTTACGTTTGGTTTATT
TCTTTCAAGGCAATATCTTCAGAGTTTCTCTTCATGGCCGACTGACGTTCCCTTGTGACTGAAC
AGTGTACATGCTGTTGCGGTGAGCATTGGTGAACACACATGCTTGAGTTCCTGTCTCTATCTCT
TTGGAGTGTGTGCATTAGAAGTAAAACTGCTGGTCAGACCTCACCAGCAGCTGCTCTATTAAAT
TCCTGGTAACGTGGGAGAGAGAATTCTTCATCCTTCAATACTCAGTCTTGTCAGTACCATCATC
ATGTCCCTTCTGACAGGCGCACACCGAAGGCCGCATTGACATTTACTCATGATTACCTACCTCA
AGTGTCTTTTGTTTGTTTGGGTTTTGTTTTGTTTTTTTGCCTTTTGTAGACCTGCTTTAAAGAA
AAGTTCTTCACGGAAAAATGTTGCCAGTTTTAATAACAGAGTCGCTTTGTTGAATTGTAGGGAT
TCTCTGTGGATTCCCAGTCTGCCCTTACAAAGCACATGATTTTCAGTACTTCCTCCTGCTCTCT
GGTGACCTTTCACTTGCTCGTGGGAGCGAGGCCGAAGTGTCAGTGTCACTTCTCACTCACCTAT
TCCGTTGCCAGTGCCTTTGGTGTCAGATTTTACAAACCTATTGTCAGTTTTCTAAGACTGCAAC
TATCTGAAGTTTTAGTCTGCAAGTTCGGTTCATACAAATCCAGCTTCATTCTTTTGAATGTAAA
CAGTCGTTTTTCCATCACCACCATTTCTTGAGGAGGTGCCCACATTGAATGATCCTCACAACCT
TATCAAAAACCAGTTTGCAGTAAATGCAAGGGTTTATTTCTGGACCCTCTGTTCTACTCCATCA
ATCCATACATCTATAGTCTGGCCATTCCAATTTTACCACAGGTCTTTTTTTTTTTTTTTTCCTC
AGTATAGCTTTTGGGACAGGGGACAAATTTTGAAATGAGGAAATACGAGTTATCCAATAGATAT
GTCCAGCCTTTTGACAGTTATATATAAAATGAACTACAAACAGAATCTCACAAGGTTTTAGTTG
CTCAGGATTCTGGGTTGGGTTATAGTCGTAGCCATCCTTGGTCCCATGCAGCAGGCAGGCTGCA
GGTTGGGTGTTTTGAGAGCTTGAGGTTACCTAGCATCCCCCGAACCTCTCCAGGTGAGTTTAGA
AGAAGACAAACAATAGGCCCACATTGGCATCTCAGTGAGGATTGCACTGAGCTTAAGTCCCGTC
CCCAAAGGTGGGCACTGCTCTCTCAACGTTTTTCCTGGTCCACAAGTTCGAGGTGTTCTCTGTT
TATTTAGGTTGTCTTTAATGCTCTCAGCAATGGTCAGTAGTTTTTAATGTAAAAGTATTCCCCC
TCCATGGTTGAATTTACTTCTCAGTATTTATTGCTGCCGGTGTAGGTGCGATAGCTTTCTTAGT
TTCTGTTTGATTTTTCTTTTCATTGCTAGTGCTTGGAAATACAGATAATTTTGTTTTGTTTTGA
TTTTGTAACTTCCAACTTTGTTGACTTTTTTGCCTTTTTAAAGGTTTGTTGCTGTTGTCCATTC
TTTACCTCTACGTACAAAATTACATCATCTGTAGGAAGAAATAGCTTGACTTTTTCATTTATAA
TTTGGATGCCTTTTCTTTCTTCTCTGTTCCTTTTTTTCCCCTTCATAATTGGTCCTTTAGAGCT
CCAGTGTTACTGAGCAGTGAATGAAGGCCAGTAACTTGTGTTCCTGGTCTTGGGAAAAGCTTTC
AGCCGTCCGTCTGTCCGTCCACCCGTCCACCACCCCTGTAACTAGGTGGGTGTGCATTCAGCCC
TTATGTTTAAGGAGCTTCCTTCTCCCTAGTTTCCTGCGAGCTTTTACCAGGAGGTTACTGGTCG
GTCGGCTTTATAGTTGAAAACGTTCTCGCAGTCGTTTGTGATGGCCGTGCTGTTTTCTTCACTC
ATTACCTTGATTGATTTTTTGTGTTACATCAGCATTTCGTTCCTGGAAAGAATCCCACTCGCGA
TGAAGGAAAGTTTAAGCATCCTTTTATGAAAACATTTGGGACCAAACGTGTCTCAGATTTCAAA
GGGGTTTTTTTGCCCCCAGTTTGGAATATTTATTTGCCTGTGGTAATTGAACATCCCCGCTTCA
AAACAATAAATCTGAAATGCTGCAAAACAATCTAAAAATGTTTTGATCATTGTTACTCTAAAAG
TTTCAGGTGCCAACACCCTTTAGGTTTTATATCAGGGACGCTTAAGTTGTCATTCTTTAAACAC
GCTCTCCAATTTGCTAGTATTGAGAATTTTTGCCTGTATTTATAACGGGTCTGGCCTGCACTCT
GCTTGCAGCATCTGTCTCCATTTAGTGTTAGCATTGCTGGCACCTGAGGTGAGTGAAGGAGTGT
TCGCCCCCTTCAGTTATGTGAAGTGACTTAAGATGGCTTAGTTCTCCTAATCCCATGCTGCTTT
GCATCTAGCTGTTTTTTATAGTAGGCCATCTTGATGCCTTTCCTTCCTTTCTTTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTGTTTTGATAATATATATT
ACAAATATTAATTATTTTGAGTTTGTGTTGTCTTAAGAGTTAAGAGTTGTGTTATCCCCTAATG
TCATCCCCTTTTATTATTCTGTCGGTGACTCTAGTTCTTAAATTTTAATCTAGATTCTTAATTC
TTTCTTTGTTTTACATGTTCATTTGTATCAAAATGTTAAGTGGCAATACAAACTCACAAACTTG
GTAGAATTAAAAAATTTTAATGTGTTCCTACACACGACGAAATGCGTATTTTCCTTCTGGAATG
TTTTCTAATGCTAAGTTCAGACCCTGGGCCTCAGGTAGAAGGTTTGTTAGTCGAGAGTTTAGTT
TCCACTTCTGACCTAAGAAAACTACTGACAACATCCGTCCATCCAAAACAAGAAGAATATAAGT
AAATTACTGATTAAAAAACTACTTCGATGTGAAAAGAATATGAGTTGACCTACACGTGTAACTA
TATTTTAATAAACTTGATATTTTATTGAAAAAAAAAAGAGTTGACCTACGATGGTTGGAAGGCC
TTTTCAAACTTTCCAGCTTCTCTCTAAGAGGCCAGGCTTTTCCTAATCTATTGGAAAACTAACA
TTCTTTTAAAGCTATCACTTGACAGACTAACATGTACTCTTGTGAGAAAGACAGGCGGACAGTT
CTTTCACAGCAGTGGCTGTGCTGTCCCTACTGCGGTGCAGATACAGGATTGCCTGGGATACTGA
AAGATGCTTCACTGGGCTGTGGACAGGACAGACAGACTTGTCTCCCTCAGACTGAATTCCTAGA
ACAGTGCTAGTGAAGCATTTCAAGTGCTCCAGCCCCTTTGGCAGCTGTAGTGACAGTTCTTAGT
TAGGTCTTCCAGTCCCCCCACCCCCTGGGCTATTACATAATGATTCAATGAAAGGGCGGGGGTG
TGGGCTATAGGGTCATTGTGGAATGGTGCTCATGCTTCTTTTGTTTTTATCTGGAAACACTGGA
ACTCGTTAGAAAGATTGCCTTGGAAGCATTCCAGCCATTTGGCTCTTCCAGACCCCAGCCAGCC
AATCTTTCAGGACTTAGCTATCTGGGGACCCCTCCCCATCTTTCTGAGCTTATGCTTTATTGCT
ACTAATTATTCTATGTTGCTTTCTCGTACGATTTACTCACCCCGGTGTCTTCTTCTCTTGCCTA
CGCTTGAGTCTCCGCTCTTTCTTCTGGAAGTCCTTCTCTGTACCCTACCCTACTACAGATTGGT
TTATGGGCCCTCCAGTTTTACTTCCCTGATGTCTGTTGTCCATGTACTTCAAAATATAAAAATA
CTTAATCATTTTTTATCATCACTCAATAACCCATAAGCCCTGTGAAGAAAAGGATTACTATGTC
TTGGACTAGATAAGAAATAGTATTTGTTGATTAAGACACACGAAATCCTTGTTTGTAAGTAAAA
CTTACCACTTACATAACTTGGCCTTGTCTCCTTTCTTTGAACTAGAGATTAATGCAATCAGGAA
ACCTAAGAACTAACTCATAATCAAGTTGTTCTACCTCTACACACACACACACACACACACACAC
ACAGAGATCTCACATAGGACTAGGAATAAAGTCAGTACAGAAGTCCAGGCAGAACAGTCTATAA
TTACTGGGAGTCTCCTAGGCAACAGTGGTGTGTGCTTGGTATGGTGTAAAGACATAGACTACTA
GTTCTTAAACTTAAAAGACTTATCTTTTAAGCATATTGACCAACATCATGGCCTCTTCAATCAA
AGTATAATTTTAAAAACTGACCAGCTGTTTCTTTGAGTCAGTTATTTAACTAGAGTTGGTCTCA
GTTCCCTTTTGTAAAATGATGTATATTAGTCCTTCCTTCGCAGGGCTCTTCCCTCACAGGGCTT
GGACTTGGAGCTCTGGACTCCAGCTGTTTCTTTGAATCAGTTACTGAAGTACCATTGGTCTCAG
TTCCCTTACTTGTAAAATGATGTATATTAGTCCTTCCTTCGCAGGGCTGTGTGAGTTCTCTGGA
CTTGGAGCGTGGAGCAGTGCTGCACACTTGTGAAGTAGTGTAGAAATAGTTCCTATCAGTAACT
GAACCTGTCACGTGATGGGATGAAAATGGGGCTTAGGTTCCACGGTCATTTAGAAGAAGGTACC
AGAACTCAGTGGCAGTTCCGTATTGGGCGCCAAACAAGGGAGTTCTGATGCAGAGATGCCATGC
CTGAAGGTTTAAACAAAGGGCACAGGACCACACGTGGCCTTGCATCTCCTTGGGTAGAAGCAAT
GTTTCTGCAGTGCTTCCTGGAAACACGGTTGGTTTTCAAATGCTTCTTCAGTAAGTGAATAATT
CCCTACCACACCTACAAATATGTTATAGCTTATATAGCTATGGATGTACCCCTTTTAAAATTGT
ACTGACAGTTAACATCAGTCTGGGTCTCTGCTTATCTACTATTTCTTCCTTCCTACACACACAC
ACACACACACACACACACACACACGCACGCACACACACACACACACACACACACGTCTTCTGAA
CCAAACCACCTGTTGACTGCACTGAGCTCATTGGAAGTAAAACAAAGAAGAATAACCTTTGCCA
ACAAGTCTGTAGTTCATACGTCCTTGTGTCAACAAAATGGCTAAAAGGAAAAAATTAGTTTCTC
CCCTTTTCATTTTCTTGCCTCAGTATAGAGCAAATGACTGAACTTGGGTAGTGGTGGCAGTAGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCACAGACACAGAGA
CTAGATGACATCAGCTGCCCCACTCAGCACTCTGCCTTACTTCTTTTTGAGACCTAGGCTTCTC
CATTTCGTCTAGACTGGTGACCTGCCGGCCTCGGGCTTGTCCCTAAGCCTCACAGTGCTGGACT
TAGAGACCCATGCACAGTTATGCCCAACATGGGTGCTGGGGTCCTTCTGCTCCCTTACACACCA
AGCAGCCACATGTCTTAAGATCAGGAAACCATCTGAAATCCATTTTACTATTCTCCCAATTCAA
CCTCAGTGGCAAGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTAC
TGGGCTTTAGAGTCTCACACATGCTAGGCAAGCACTCCTCTACTGCACTATAATCCTTATGCAC
ACAGAAAGCATTCAATGTGCCATGTACAGAGATAGGATTCTGTATTTATCCACCTTGTTAACGC
AGAAGGAGCCATGTTGGAGTCACTGTAAGTAAATGGAAATGAACAAACCCACTTGCCTCTTAGC
ACTTTTTTTATTACAAAGTATTTATTCAACAAAACAATATGACAGTAAAAAAACGACACCCATG
TGGCAGCGGAGGAAGCTTCTCAGCTGTAGGGAAGCTGCGCAGGGACTGAGTTCAGCTTCCACAG
TGAGGTTCTAGAGCTCCAACGGCAGCTGCAGCAGCTGAACACTGATTAAGCAAGCATAAGAGCC
GGGGATGCTTTTTGCAGCCTATTTTCTGGCTAAATTAATCCTGTTAAAAACACAGAAGACGGCG
AAGCTGTTATTCTCCATCTTCAGTTCTCCCTTGAGTATTTGGACTCACCAAGAATGACACAGTG
TATCTAGAATACAGGATAATCACAGTAATTGGAGGACAAGGAAACAGCAGGCAGACTTACAGTC
ACATGAACATTTCCAGCCAGCATTTATAGTTTAAAAGTCTACAAAAAGTCATTCTGTTGAGATT
CCTGCACACTCCTTGTTCCTTCCTAAGAATCTTGCATATCAAACGCACCCTCATCAAGCAATTT
TCAGCACTCCAGCCTGATGTTTCCGTAGGTGTTGAACCACTCCCACTCTACCCTCAGTGAATGC
TGTGGCCCCAGGCCGCTCCCTGCCTCTCACCTGGTTCTGTGGGCCTGTCTTGACCGGAGAACAG
CGGAAGCACGCCCTCTGAAAGCCCCTCCCAGCTCTGACACTGCGTTCAGTAATTATAGTCCCCT
GAACCAGATCCTTTTTATTTTAGTACACATTTATTCTTTGCCATGAGGGAGTGGCAGGGTGTCT
ATTTATGGGCTTGGAGCTGTCTTCATGGCCTTACAGTCAGAGGCTTTTTCTCTTCTCTTAGTAA
GCACACACCCCTTAGAAAGATAGTCCCATTCCGGTACTAAGTCTCAATTTGTAAGTATCTAAAC
ATAATTTTAATTGTTTAAAATTCAGATTTTTTTTGCATAAACTTTTTTTTAGCCCCCTTATGAT
TTGTTATTTATCTATTCTGTTGAGGCACATTTCAAATTGTACTTTGGTTTTTGTTTTTGGTTTT
TTTTAACTACTTGTGGATAAGTAGTGTTTCAGCTCACCTGATCTTAAATTGAAAGCACTTTGAG
TCCATAGTCTTACATCAGGACTTCCCCTTAAGCACAAATGTGCTGCTACCTTCTGGGTTTTACC
AGATGAGGGCCTGCCGCCTTCACAGCCCTGACCCACGGCACATGAAGCCTTCCCTGCAGAGCAT
CCGAGGAGCTGCTGCCTCGGATTCAGAGTGAGATTCCTGAAGAGTTTTCCTTTATCGGATTGCC
TTCCTTCTCGCCACCAATTGAATACAGAAAGCAGTGTCTCTCGGGCGCTCATCTTGAGAAGCAA
GGCTTTCAGTTCCTCCAGATCTTAGTAACGCATTTTGCTTTAATCCACCAAAAATTACCTATAC
ACAGGAAGTATATCTACAGAAAGCTGGTATTATATAATCGTTTCTTTGTTTGAATTCGCCATCT
GTGAGCATCTCTCCAAAACATTCTTAGTTTGTCTCCCAGCCCCCTCTTTGGGAGAGGCAGGGAG
ACAGATTCCTGGGGTTTGTACCCACTGCCTCAGCACATGCAGGGCACACATTCTACTGAGCTAA
GTCCTCAGCCCTACAACATTAGGTTTTAAATATTAATTGCCGTGCCAGGAATCTTAAGAAACCT
TAACTCCCAGCAGTGATAAGATCCCAGATGGCTGTGGTTGTAGGAAATGAAGAAGGCAGGGCTA
GTCTTTAAATTAAACACAAACCTGGGAAGTCCCCTCGAGAGTTTGGCTGGCATGGACTTAACAT
AGCCTTAGCAGCCCAGACTTCTGCCGGGGGGTTAGAAAGGCCTCTATAGATGACTAAGCCACTG
GCCTCTCAAAGTTCTCCTTTTAAAAAATGCACTTTGGAACATGTTCTTTAAAGAATGTTTATTG
TCTAAATATGGCTTCGTTCATTCTTATAAAAACATTACTTGGACATTGTATTTACTGGATTTCA
GTTCAAAAGAAGTCCTAAGGCAGTTCTTAGTGATAGAAGTACACTTTGATGGTGTCTACGTGAG
AAAATAGCACTCTACTGAGAGCTGTTTGATGCCAATGCGTCCTTCAAACATTTCCTCTCAATAC
TAGAAATACACAAGTTCATGTACATAAAACTAAATGCAAAGGAAGGCACAGCTGGTTATACCGT
GTATACAAGCAGAGCTCAGCATATGTAGATTTAAA

hide sequence

RefSeq Acc Id:

XR_001838688

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	29,618,389 - 29,677,613 (+)	NCBI
mRatBN7.2	7	27,729,659 - 27,765,814 (+)	NCBI
Rnor_6.0	7	34,047,161 - 34,088,418 (+)	NCBI

Sequence:

show sequence

TTTTAATATCTTATATATGTAATTATTACATATTTTACTTAACAGCCTCCGCTGCTGTTATTCT
GCCCTAGATTTACTAAGTCCCCTGAAGGACCTTACTGTAGCAGGGACAGTAATGTGGGAGTGGG
TCAAACTGTCAGTGTTCGAGGTCAGTCCCCAGCAGTCTCTGTCCTTCACCAGGTTGTATTTAAC
TGCTGATCTGCATCTGCTTGAATATTCAGCTAGGGACAATAAATAAAGCCTCCGTGGAGGAAGA
CAGCTGCATGTGGAACCTCTACGTTCCTCCAGTTTACCTCGTCTTCATGTAGTGTCTGACAGCC
TGTAAGCTATCCACACATCAAAGAGAGAGAAAAAGCCAGCAGCAGAAGCAGCCTGACGGCTTAT
ACAGACTGAGGGGTTATAGACAGGAGTGCCCATTAGCATATTCATGAAGATAGATGCTGGAGCT
AGAATGCTGCCAGAGAGCTGGGATCTGCAGAAAAGAATCAGGTGGGGGTTCTATAACTGAAGAA
ATGGGCAGTGCATCGAGGAGATGGGTTTAGTCCCAGGCGAGACACAGCGAGGAGGATGACCGGT
AAACGGGATGAATTTTTCAAGCCATATCCAGCTGATAGGATGAAAAAGTTTAAGAGGAGACTGT
CCCTCACGCTCAGGGGAAGCCAGACTATTGATGAGTCCCTGTCGGAGCTGGCTGAACAGATGAC
CATAGAGGAGAGCAGTAGCAAAGACAACGAGCCCATTGTGAAGAATGGCAGGCCGCCAACGTCT
CACAGCATGCATTCCTTCCTCCATCAGTACACAGGGTCCTTCAAGAAGCCCCCACTGCGAAGAC
CCCACAGCGTTATTGGAGGAAGCCTTGGTTCCTTTATGGCAATGCCCAGAAATGGAAGCAGATT
AGATATTGTTCATGAAAATCTGAAAATGGGATCAGATGGTGAGAGTGACCAAGCTTCTGGGACA
TCATCTGATGAAGTCCAGTCCCCTACAGGTGTTTGCCTCAGAAATCGTATACATAGACGGATCT
CGATGGAGGACTTGAATAAGCGGCTGTCGCTGCCTGCAGACATCAGGATACCCGATGGCTACCT
GGAGAAGCTGCAGATCAGCAGCCCGCCCTTCGACCAGCCCATGAGCCGCAGGTCCCGCAGAGCC
TCCTTATCAGAAATTGGGTTTGGGAAAATGGAAACCTACATCAAATTGGAAAAGCTTGGAGAGG
GCACATATGCAACGGTATATAAAGGGAGAAGTAAGTTGACAGAGAACTTGGTGGCATTAAAAGA
GATCCGCTTGGAACACGAAGAAGGTGCACCCTGTACAGCTATAAGAGAAGTTTCACTGTTAAAG
GACTTAAAACATGCAAATATAGTAACGTTGCATGACATCGTTCACACGGACAAGTCTTTGACTC
TGGTCTTTGAGTACCTGGACAAAGACCTGAAGCAGTACATGGACGACTGTGGGAGCATCATGAG
CATGCACAACGTCAAGCTGTTCCTGTACCAGATTCTCCGTGGTTTGGCATATTGCCATAGAAGA
AAAGTGTTGCACCGGGACCTGAAACCACAGAACCTCCTCATTAATGAAAGAGGAGAACTAAAGC
TGGCTGACTTTGGACTAGCCAGAGCCAAGTCAGTCCCCACCAAGACCTACTCAAATGAAGTTGT
CACGCTGTGGTATCGGCCCCCTGACGTGCTTCTTGGTTCCTCGGAGTACTCAACTCAGATCGAC
ATGTGGGGAGTTGGCTGCATTTTCTTTGAAATGGCTTCTGGAAGACCACTGTTTCCAGGGTCAA
CTGTGGAAGATGAACTGCACTTAATATTTCGACTACTAGGAACTCCATCTCAGGAAACTTGGCC
AGGTGTTTCTTCAAATGATGAATTCAAGAACTACAACTTCCCAAAATATAAGCCACAACCTCTA
ATTAATCATGCACCCAGGTTAGATTCTGAAGGAATTGAGTTGATAACAAAGTTTCTTCAGTATG
AATCTAAGAAAAGGGCTCCAGCAGAAGAGGCCATGAAACATGTGTACTTCCGAAGTCTAGGGCC
GAGAATACATGCTTTACCAGAAAGCGTATCAATATTCAGTTTGAAAGAGATTCAGTTGCAAAAG
GACCCGGGTTTTCGAAATTCTTCCTATCCAGAGACAGCCCTATCCTGATCCTGGAAACTGCAGA
GAAGAGACTTAAAACTCGGAAAGACTGAACCTGGAATTCTCACAAGCCCCTTAAACTGACAAGG
CCTCCGAAGGCAATATCTTCAGAGTTTCTCTTCATGGCCGACTGACGTTCCCTTGTGACTGAAC
AGTGTACATGCTGTTGCGGTGAGCATTGGTGAACACACATGCTTGAGTTCCTGTCTCTATCTCT
TTGGAGTGTGTGCATTAGAAGTAAAACTGCTGGTCAGACCTCACCAGCAGCTGCTCTATTAAAT
TCCTGGTAACGTGGGAGAGAGAATTCTTCATCCTTCAATACTCAGTCTTGTCAGTACCATCATC
ATGTCCCTTCTGACAGGCGCACACCGAAGGCCGCATTGACATTTACTCATGATTACCTACCTCA
AGTGTCTTTTGTTTGTTTGGGTTTTGTTTTGTTTTTTTGCCTTTTGTAGACCTGCTTTAAAGAA
AAGTTCTTCACGGAAAAATGTTGCCAGTTTTAATAACAGAGTCGCTTTGTTGAATTGTAGGGAT
TCTCTGTGGATTCCCAGTCTGCCCTTACAAAGCACATGATTTTCAGTACTTCCTCCTGCTCTCT
GGTGACCTTTCACTTGCTCGTGGGAGCGAGGCCGAAGTGTCAGTGTCACTTCTCACTCACCTAT
TCCGTTGCCAGTGCCTTTGGTGTCAGATTTTACAAACCTATTGTCAGTTTTCTAAGACTGCAAC
TATCTGAAGTTTTAGTCTGCAAGTTCGGTTCATACAAATCCAGCTTCATTCTTTTGAATGTAAA
CAGTCGTTTTTCCATCACCACCATTTCTTGAGGAGGTGCCCACATTGAATGATCCTCACAACCT
TATCAAAAACCAGTTTGCAGTAAATGCAAGGGTTTATTTCTGGACCCTCTGTTCTACTCCATCA
ATCCATACATCTATAGTCTGGCCATTCCAATTTTACCACAGGTCTTTTTTTTTTTTTTTTCCTC
AGTATAGCTTTTGGGACAGGGGACAAATTTTGAAATGAGGAAATACGAGTTATCCAATAGATAT
GTCCAGCCTTTTGACAGTTATATATAAAATGAACTACAAACAGAATCTCACAAGGTTTTAGTTG
CTCAGGATTCTGGGTTGGGTTATAGTCGTAGCCATCCTTGGTCCCATGCAGCAGGCAGGCTGCA
GGTTGGGTGTTTTGAGAGCTTGAGGTTACCTAGCATCCCCCGAACCTCTCCAGGTGAGTTTAGA
AGAAGACAAACAATAGGCCCACATTGGCATCTCAGTGAGGATTGCACTGAGCTTAAGTCCCGTC
CCCAAAGGTGGGCACTGCTCTCTCAACGTTTTTCCTGGTCCACAAGTTCGAGGTGTTCTCTGTT
TATTTAGGTTGTCTTTAATGCTCTCAGCAATGGTCAGTAGTTTTTAATGTAAAAGTATTCCCCC
TCCATGGTTGAATTTACTTCTCAGTATTTATTGCTGCCGGTGTAGGTGCGATAGCTTTCTTAGT
TTCTGTTTGATTTTTCTTTTCATTGCTAGTGCTTGGAAATACAGATAATTTTGTTTTGTTTTGA
TTTTGTAACTTCCAACTTTGTTGACTTTTTTGCCTTTTTAAAGGTTTGTTGCTGTTGTCCATTC
TTTACCTCTACGTACAAAATTACATCATCTGTAGGAAGAAATAGCTTGACTTTTTCATTTATAA
TTTGGATGCCTTTTCTTTCTTCTCTGTTCCTTTTTTTCCCCTTCATAATTGGTCCTTTAGAGCT
CCAGTGTTACTGAGCAGTGAATGAAGGCCAGTAACTTGTGTTCCTGGTCTTGGGAAAAGCTTTC
AGCCGTCCGTCTGTCCGTCCACCCGTCCACCACCCCTGTAACTAGGTGGGTGTGCATTCAGCCC
TTATGTTTAAGGAGCTTCCTTCTCCCTAGTTTCCTGCGAGCTTTTACCAGGAGGTTACTGGTCG
GTCGGCTTTATAGTTGAAAACGTTCTCGCAGTCGTTTGTGATGGCCGTGCTGTTTTCTTCACTC
ATTACCTTGATTGATTTTTTGTGTTACATCAGCATTTCGTTCCTGGAAAGAATCCCACTCGCGA
TGAAGGAAAGTTTAAGCATCCTTTTATGAAAACATTTGGGACCAAACGTGTCTCAGATTTCAAA
GGGGTTTTTTTGCCCCCAGTTTGGAATATTTATTTGCCTGTGGTAATTGAACATCCCCGCTTCA
AAACAATAAATCTGAAATGCTGCAAAACAATCTAAAAATGTTTTGATCATTGTTACTCTAAAAG
TTTCAGGTGCCAACACCCTTTAGGTTTTATATCAGGGACGCTTAAGTTGTCATTCTTTAAACAC
GCTCTCCAATTTGCTAGTATTGAGAATTTTTGCCTGTATTTATAACGGGTCTGGCCTGCACTCT
GCTTGCAGCATCTGTCTCCATTTAGTGTTAGCATTGCTGGCACCTGAGGTGAGTGAAGGAGTGT
TCGCCCCCTTCAGTTATGTGAAGTGACTTAAGATGGCTTAGTTCTCCTAATCCCATGCTGCTTT
GCATCTAGCTGTTTTTTATAGTAGGCCATCTTGATGCCTTTCCTTCCTTTCTTTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTGTTTTGATAATATATATT
ACAAATATTAATTATTTTGAGTTTGTGTTGTCTTAAGAGTTAAGAGTTGTGTTATCCCCTAATG
TCATCCCCTTTTATTATTCTGTCGGTGACTCTAGTTCTTAAATTTTAATCTAGATTCTTAATTC
TTTCTTTGTTTTACATGTTCATTTGTATCAAAATGTTAAGTGGCAATACAAACTCACAAACTTG
GTAGAATTAAAAAATTTTAATGTGTTCCTACACACGACGAAATGCGTATTTTCCTTCTGGAATG
TTTTCTAATGCTAAGTTCAGACCCTGGGCCTCAGGTAGAAGGTTTGTTAGTCGAGAGTTTAGTT
TCCACTTCTGACCTAAGAAAACTACTGACAACATCCGTCCATCCAAAACAAGAAGAATATAAGT
AAATTACTGATTAAAAAACTACTTCGATGTGAAAAGAATATGAGTTGACCTACACGTGTAACTA
TATTTTAATAAACTTGATATTTTATTGAAAAAAAAAAGAGTTGACCTACGATGGTTGGAAGGCC
TTTTCAAACTTTCCAGCTTCTCTCTAAGAGGCCAGGCTTTTCCTAATCTATTGGAAAACTAACA
TTCTTTTAAAGCTATCACTTGACAGACTAACATGTACTCTTGTGAGAAAGACAGGCGGACAGTT
CTTTCACAGCAGTGGCTGTGCTGTCCCTACTGCGGTGCAGATACAGGATTGCCTGGGATACTGA
AAGATGCTTCACTGGGCTGTGGACAGGACAGACAGACTTGTCTCCCTCAGACTGAATTCCTAGA
ACAGTGCTAGTGAAGCATTTCAAGTGCTCCAGCCCCTTTGGCAGCTGTAGTGACAGTTCTTAGT
TAGGTCTTCCAGTCCCCCCACCCCCTGGGCTATTACATAATGATTCAATGAAAGGGCGGGGGTG
TGGGCTATAGGGTCATTGTGGAATGGTGCTCATGCTTCTTTTGTTTTTATCTGGAAACACTGGA
ACTCGTTAGAAAGATTGCCTTGGAAGCATTCCAGCCATTTGGCTCTTCCAGACCCCAGCCAGCC
AATCTTTCAGGACTTAGCTATCTGGGGACCCCTCCCCATCTTTCTGAGCTTATGCTTTATTGCT
ACTAATTATTCTATGTTGCTTTCTCGTACGATTTACTCACCCCGGTGTCTTCTTCTCTTGCCTA
CGCTTGAGTCTCCGCTCTTTCTTCTGGAAGTCCTTCTCTGTACCCTACCCTACTACAGATTGGT
TTATGGGCCCTCCAGTTTTACTTCCCTGATGTCTGTTGTCCATGTACTTCAAAATATAAAAATA
CTTAATCATTTTTTATCATCACTCAATAACCCATAAGCCCTGTGAAGAAAAGGATTACTATGTC
TTGGACTAGATAAGAAATAGTATTTGTTGATTAAGACACACGAAATCCTTGTTTGTAAGTAAAA
CTTACCACTTACATAACTTGGCCTTGTCTCCTTTCTTTGAACTAGAGATTAATGCAATCAGGAA
ACCTAAGAACTAACTCATAATCAAGTTGTTCTACCTCTACACACACACACACACACACACACAC
ACAGAGATCTCACATAGGACTAGGAATAAAGTCAGTACAGAAGTCCAGGCAGAACAGTCTATAA
TTACTGGGAGTCTCCTAGGCAACAGTGGTGTGTGCTTGGTATGGTGTAAAGACATAGACTACTA
GTTCTTAAACTTAAAAGACTTATCTTTTAAGCATATTGACCAACATCATGGCCTCTTCAATCAA
AGTATAATTTTAAAAACTGACCAGCTGTTTCTTTGAGTCAGTTATTTAACTAGAGTTGGTCTCA
GTTCCCTTTTGTAAAATGATGTATATTAGTCCTTCCTTCGCAGGGCTCTTCCCTCACAGGGCTT
GGACTTGGAGCTCTGGACTCCAGCTGTTTCTTTGAATCAGTTACTGAAGTACCATTGGTCTCAG
TTCCCTTACTTGTAAAATGATGTATATTAGTCCTTCCTTCGCAGGGCTGTGTGAGTTCTCTGGA
CTTGGAGCGTGGAGCAGTGCTGCACACTTGTGAAGTAGTGTAGAAATAGTTCCTATCAGTAACT
GAACCTGTCACGTGATGGGATGAAAATGGGGCTTAGGTTCCACGGTCATTTAGAAGAAGGTACC
AGAACTCAGTGGCAGTTCCGTATTGGGCGCCAAACAAGGGAGTTCTGATGCAGAGATGCCATGC
CTGAAGGTTTAAACAAAGGGCACAGGACCACACGTGGCCTTGCATCTCCTTGGGTAGAAGCAAT
GTTTCTGCAGTGCTTCCTGGAAACACGGTTGGTTTTCAAATGCTTCTTCAGTAAGTGAATAATT
CCCTACCACACCTACAAATATGTTATAGCTTATATAGCTATGGATGTACCCCTTTTAAAATTGT
ACTGACAGTTAACATCAGTCTGGGTCTCTGCTTATCTACTATTTCTTCCTTCCTACACACACAC
ACACACACACACACACACACACACGCACGCACACACACACACACACACACACACGTCTTCTGAA
CCAAACCACCTGTTGACTGCACTGAGCTCATTGGAAGTAAAACAAAGAAGAATAACCTTTGCCA
ACAAGTCTGTAGTTCATACGTCCTTGTGTCAACAAAATGGCTAAAAGGAAAAAATTAGTTTCTC
CCCTTTTCATTTTCTTGCCTCAGTATAGAGCAAATGACTGAACTTGGGTAGTGGTGGCAGTAGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCACAGACACAGAGA
CTAGATGACATCAGCTGCCCCACTCAGCACTCTGCCTTACTTCTTTTTGAGACCTAGGCTTCTC
CATTTCGTCTAGACTGGTGACCTGCCGGCCTCGGGCTTGTCCCTAAGCCTCACAGTGCTGGACT
TAGAGACCCATGCACAGTTATGCCCAACATGGGTGCTGGGGTCCTTCTGCTCCCTTACACACCA
AGCAGCCACATGTCTTAAGATCAGGAAACCATCTGAAATCCATTTTACTATTCTCCCAATTCAA
CCTCAGTGGCAAGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTAC
TGGGCTTTAGAGTCTCACACATGCTAGGCAAGCACTCCTCTACTGCACTATAATCCTTATGCAC
ACAGAAAGCATTCAATGTGCCATGTACAGAGATAGGATTCTGTATTTATCCACCTTGTTAACGC
AGAAGGAGCCATGTTGGAGTCACTGTAAGTAAATGGAAATGAACAAACCCACTTGCCTCTTAGC
ACTTTTTTTATTACAAAGTATTTATTCAACAAAACAATATGACAGTAAAAAAACGACACCCATG
TGGCAGCGGAGGAAGCTTCTCAGCTGTAGGGAAGCTGCGCAGGGACTGAGTTCAGCTTCCACAG
TGAGGTTCTAGAGCTCCAACGGCAGCTGCAGCAGCTGAACACTGATTAAGCAAGCATAAGAGCC
GGGGATGCTTTTTGCAGCCTATTTTCTGGCTAAATTAATCCTGTTAAAAACACAGAAGACGGCG
AAGCTGTTATTCTCCATCTTCAGTTCTCCCTTGAGTATTTGGACTCACCAAGAATGACACAGTG
TATCTAGAATACAGGATAATCACAGTAATTGGAGGACAAGGAAACAGCAGGCAGACTTACAGTC
ACATGAACATTTCCAGCCAGCATTTATAGTTTAAAAGTCTACAAAAAGTCATTCTGTTGAGATT
CCTGCACACTCCTTGTTCCTTCCTAAGAATCTTGCATATCAAACGCACCCTCATCAAGCAATTT
TCAGCACTCCAGCCTGATGTTTCCGTAGGTGTTGAACCACTCCCACTCTACCCTCAGTGAATGC
TGTGGCCCCAGGCCGCTCCCTGCCTCTCACCTGGTTCTGTGGGCCTGTCTTGACCGGAGAACAG
CGGAAGCACGCCCTCTGAAAGCCCCTCCCAGCTCTGACACTGCGTTCAGTAATTATAGTCCCCT
GAACCAGATCCTTTTTATTTTAGTACACATTTATTCTTTGCCATGAGGGAGTGGCAGGGTGTCT
ATTTATGGGCTTGGAGCTGTCTTCATGGCCTTACAGTCAGAGGCTTTTTCTCTTCTCTTAGTAA
GCACACACCCCTTAGAAAGATAGTCCCATTCCGGTACTAAGTCTCAATTTGTAAGTATCTAAAC
ATAATTTTAATTGTTTAAAATTCAGATTTTTTTTGCATAAACTTTTTTTTAGCCCCCTTATGAT
TTGTTATTTATCTATTCTGTTGAGGCACATTTCAAATTGTACTTTGGTTTTTGTTTTTGGTTTT
TTTTAACTACTTGTGGATAAGTAGTGTTTCAGCTCACCTGATCTTAAATTGAAAGCACTTTGAG
TCCATAGTCTTACATCAGGACTTCCCCTTAAGCACAAATGTGCTGCTACCTTCTGGGTTTTACC
AGATGAGGGCCTGCCGCCTTCACAGCCCTGACCCACGGCACATGAAGCCTTCCCTGCAGAGCAT
CCGAGGAGCTGCTGCCTCGGATTCAGAGTGAGATTCCTGAAGAGTTTTCCTTTATCGGATTGCC
TTCCTTCTCGCCACCAATTGAATACAGAAAGCAGTGTCTCTCGGGCGCTCATCTTGAGAAGCAA
GGCTTTCAGTTCCTCCAGATCTTAGTAACGCATTTTGCTTTAATCCACCAAAAATTACCTATAC
ACAGGAAGTATATCTACAGAAAGCTGGTATTATATAATCGTTTCTTTGTTTGAATTCGCCATCT
GTGAGCATCTCTCCAAAACATTCTTAGTTTGTCTCCCAGCCCCCTCTTTGGGAGAGGCAGGGAG
ACAGATTCCTGGGGTTTGTACCCACTGCCTCAGCACATGCAGGGCACACATTCTACTGAGCTAA
GTCCTCAGCCCTACAACATTAGGTTTTAAATATTAATTGCCGTGCCAGGAATCTTAAGAAACCT
TAACTCCCAGCAGTGATAAGATCCCAGATGGCTGTGGTTGTAGGAAATGAAGAAGGCAGGGCTA
GTCTTTAAATTAAACACAAACCTGGGAAGTCCCCTCGAGAGTTTGGCTGGCATGGACTTAACAT
AGCCTTAGCAGCCCAGACTTCTGCCGGGGGGTTAGAAAGGCCTCTATAGATGACTAAGCCACTG
GCCTCTCAAAGTTCTCCTTTTAAAAAATGCACTTTGGAACATGTTCTTTAAAGAATGTTTATTG
TCTAAATATGGCTTCGTTCATTCTTATAAAAACATTACTTGGACATTGTATTTACTGGATTTCA
GTTCAAAAGAAGTCCTAAGGCAGTTCTTAGTGATAGAAGTACACTTTGATGGTGTCTACGTGAG
AAAATAGCACTCTACTGAGAGCTGTTTGATGCCAATGCGTCCTTCAAACATTTCCTCTCAATAC
TAGAAATACACAAGTTCATGTACATAAAACTAAATGCAAAGGAAGGCACAGCTGGTTATACCGT
GTATACAAGCAGAGCTCAGCATATGTAGATTTAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001101552	(Get FASTA)	NCBI Sequence Viewer
	XP_006241315	(Get FASTA)	NCBI Sequence Viewer
	XP_017450324	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM16922	(Get FASTA)	NCBI Sequence Viewer
	EDM16923	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000005762.4
	ENSRNOP00000077965.1
	ENSRNOP00000085940.1
GenBank Protein	O35831	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001101552 ⟸ NM_001108082

- UniProtKB:

O35831 (UniProtKB/Swiss-Prot), G3V6J5 (UniProtKB/TrEMBL), A6IFX6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKKFKRRLSLTLRGSQTIDESLSELAEQMTIEESSSKDNEPIVKNGRPPTSHSMHSFLHQYTGS
FKKPPLRRPHSVIGGSLGSFMAMPRNGSRLDIVHENLKMGSDGESDQASGTSSDEVQSPTGVCL
RNRIHRRISMEDLNKRLSLPADIRIPDGYLEKLQISSPPFDQPMSRRSRRASLSEIGFGKMETY
IKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI
VHTDKSLTLVFEYLDKDLKQYMDDCGSIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLL
INERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS
GRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKPQPLINHAPRLDSEGIE
LITKFLQYESKKRAPAEEAMKHVYFRSLGPRIHALPESVSIFSLKEIQLQKDPGFRNSSYPETG
HGKNRRQSMLF

hide sequence

RefSeq Acc Id:	XP_006241315 ⟸ XM_006241253
- Peptide Label:	isoform X2
- UniProtKB:	O35831 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MTGKRDEFFKPYPADRMKKFKRRLSLTLRGSQTIDESLSELAEQMTIEESSSKDNEPIVKNGRP PTSHSMHSFLHQYTGSFKKPPLRRPHSVIGGSLGSFMAMPRNGSRLDIVHENLKMGSDGESDQA SGTSSDEVQSPTGVCLRNRIHRRISMEDLNKRLSLPADIRIPDGYLEKLQISSPPFDQPMSRRS RRASLSEIGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVS LLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGSIMSMHNVKLFLYQILRGLAYC HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYST QIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKP QPLINHAPRLDSEGIELITKFLQYESKKRAPAEEAMKHVYFRSLGPRIHALPESVSIFSLKEIQ LQKDPGFRNSSYPETGHGKNRRQSMLF hide sequence

RefSeq Acc Id:	XP_017450324 ⟸ XM_017594835
- Peptide Label:	isoform X1
- UniProtKB:	O35831 (UniProtKB/Swiss-Prot), A6IFX5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTGKRDEFFKPYPADRMKKFKRRLSLTLRGSQTIDESLSELAEQMTIEESSSKDNEPIVKNGRP PTSHSMHSFLHQYTGSFKKPPLRRPHSVIGGSLGSFMAMPRNGSRLDIVHENLKMGSDGESDQA SGTSSDEVQSPTGVCLRNRIHRRISMEDLNKRLSLPADIRIPDGYLEKLQISSPPFDQPMSRRS RRASLSEIGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVS LLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGSIMSMHNVKLFLYQILRGLAYC HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYST QIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGVSSNDEFKNYNFPKYKP QPLINHAPRLDSEGIELITKFLQYESKKRAPAEEAMKHVYFRSLGPRIHALPESVSIFSLKEIQ LQKDPGFRNSSYPETALS hide sequence

Ensembl Acc Id:

ENSRNOP00000005762 ⟸ ENSRNOT00000005762

Ensembl Acc Id:

ENSRNOP00000085940 ⟸ ENSRNOT00000109496

Ensembl Acc Id:

ENSRNOP00000077965 ⟸ ENSRNOT00000110945

Protein Domains

Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O35831-F1-model_v2	AlphaFold	O35831	1-523	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695144

Promoter ID:

EPDNEW_R5669

Type:

initiation region

Name:

Cdk17_1

Description:

cyclin-dependent kinase 17

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	34,001,444 - 34,001,504	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1565593	AgrOrtholog
BioCyc Gene	G2FUF-34404	BioCyc
Ensembl Genes	ENSRNOG00000004148	Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000005762.5	UniProtKB/TrEMBL
	ENSRNOT00000109496.1	UniProtKB/Swiss-Prot
	ENSRNOT00000110945.1	UniProtKB/TrEMBL
Gene3D-CATH	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	CDK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:314743	UniProtKB/TrEMBL
NCBI Gene	314743	ENTREZGENE
PANTHER	CELL DIVISION PROTEIN KINASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CYCLIN-DEPENDENT KINASE 17	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Cdk17	PhenoGen
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004148	RatGTEx
SMART	S_TKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I5Y814_RAT	UniProtKB/TrEMBL
	A6IFX5	ENTREZGENE, UniProtKB/TrEMBL
	A6IFX6	ENTREZGENE, UniProtKB/TrEMBL
	CDK17_RAT	UniProtKB/Swiss-Prot
	G3V6J5	ENTREZGENE, UniProtKB/TrEMBL
	O35831	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-02	Cdk17	cyclin-dependent kinase 17	Pctk2	PCTAIRE protein kinase 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-10-24	Pctk2	PCTAIRE protein kinase 2	Pctk2	PCTAIRE-motif protein kinase 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Pctk2	PCTAIRE-motif protein kinase 2			Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	Pctk2	PCTAIRE-motif protein kinase 2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD