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Gene: Anks1b (ankyrin repeat and sterile alpha motif domain containing 1B) Rattus norvegicus
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Symbol: Anks1b
Name: ankyrin repeat and sterile alpha motif domain containing 1B
RGD ID: 1565556
Description: Predicted to have ephrin receptor binding activity. Involved in receptor localization to synapse. Localizes to several cellular components, including hippocampal mossy fiber to CA3 synapse; postsynaptic density, intracellular component; and presynaptic cytosol. Orthologous to human ANKS1B (ankyrin repeat and sterile alpha motif domain containing 1B); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; atrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AIDA-1; amyloid-beta protein intracellular domain-associated protein 1; Ankyrin repeat and sterile alpha motif domain-containing protein 1B; E2A-PBX1-associated protein; EB-1; LOC314721; RGD1565556; similar to cajalin 2 isoform a
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0730,507,135 - 31,684,604 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl730,699,476 - 31,681,182 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0730,603,416 - 31,776,175 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4726,749,708 - 27,914,155 (+)NCBIRGSC3.4rn4RGSC3.4
Celera721,458,045 - 22,603,947 (+)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Anks1b
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565556
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.