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Gene: Fgd1 (FYVE, RhoGEF and PH domain containing 1) Rattus norvegicus
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Symbol: Fgd1
Name: FYVE, RhoGEF and PH domain containing 1
Description: Predicted to have guanyl-nucleotide exchange factor activity and small GTPase binding activity. Predicted to be involved in several processes, including filopodium assembly; regulation of GTPase activity; and regulation of cell shape. Predicted to localize to the Golgi apparatus; lamellipodium; and ruffle. Human ortholog(s) of this gene implicated in Aarskog syndrome and non-syndromic X-linked intellectual disability. Orthologous to human FGD1 (FYVE, RhoGEF and PH domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; furan; indole-3-methanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: FYVE, RhoGEF and PH domain-containing protein 1; FYVE, RhoGEF and PH domain-containing protein 1-like; LOC102555067
Orthologs:
Homo sapiens (human) : FGD1 (FYVE, RhoGEF and PH domain containing 1)  HGNC  Alliance
Mus musculus (house mouse) : Fgd1 (FYVE, RhoGEF and PH domain containing 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fgd1 (FYVE, RhoGEF and PH domain containing 1)
Pan paniscus (bonobo/pygmy chimpanzee) : FGD1 (FYVE, RhoGEF and PH domain containing 1)
Canis lupus familiaris (dog) : FGD1 (FYVE, RhoGEF and PH domain containing 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fgd1 (FYVE, RhoGEF and PH domain containing 1)
Sus scrofa (pig) : FGD1 (FYVE, RhoGEF and PH domain containing 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X20,100,942 - 20,143,871 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX20,216,587 - 20,225,955 (+)Ensembl
Rnor_5.0X20,846,380 - 20,888,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X40,364,211 - 40,407,213 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX20,281,249 - 20,323,819 (+)NCBICelera
Cytogenetic MapXq12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Fgd1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565188
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.