Poc1a (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 115,801,335 - 115,869,812 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 106,922,058 - 106,991,678 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 106,922,978 - 106,991,089 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 112,545,008 - 112,613,494 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 110,744,171 - 110,812,663 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 108,586,976 - 108,655,457 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 114,982,764 - 115,050,844 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 114,986,326 - 115,050,728 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 114,351,523 - 114,399,621 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 111,413,724 - 111,472,484 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 8 | 106,238,776 - 106,303,604 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q32 | NCBI | | | | |
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POC1A (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 52,075,226 - 52,154,423 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 52,075,226 - 52,154,690 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 52,109,242 - 52,188,439 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 52,084,310 - 52,163,460 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 52,084,309 - 52,163,460 | NCBI | | | | | Celera | 3 | 52,088,573 - 52,168,026 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | p21.2 | NCBI | | | | | HuRef | 3 | 52,171,920 - 52,251,375 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 52,061,776 - 52,141,229 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 52,108,129 - 52,187,328 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Poc1a (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 106,156,177 - 106,227,721 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 106,158,260 - 106,227,720 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 106,279,443 - 106,350,522 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 106,281,061 - 106,350,521 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 106,183,392 - 106,252,222 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 106,139,502 - 106,207,978 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 105,908,630 - 105,977,178 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | F1 | NCBI | | | | | cM Map | 9 | 57.46 | NCBI | | | | |
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Poc1a (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955532 | 3,708,274 - 3,789,797 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955532 | 3,707,680 - 3,790,565 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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POC1A (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 52,069,460 - 52,149,183 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 52,074,230 - 52,153,976 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 52,016,372 - 52,096,073 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 53,245,162 - 53,324,579 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 53,245,162 - 53,324,579 (-) | Ensembl | panpan1.1 | | panPan2 | |
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POC1A (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 37,592,080 - 37,659,783 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 37,544,186 - 37,681,725 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 37,573,632 - 37,641,356 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 37,942,700 - 38,010,430 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 37,942,727 - 38,034,072 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 37,306,357 - 37,374,069 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 37,714,859 - 37,782,566 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 37,999,937 - 38,067,663 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Poc1a (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 66,662,795 - 66,735,176 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936529 | 3,422,788 - 3,495,655 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936529 | 3,423,588 - 3,495,698 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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POC1A (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 34,227,457 - 34,308,083 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 34,227,884 - 34,308,099 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 37,486,493 - 37,521,705 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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POC1A (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 13,442,516 - 13,549,290 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 13,442,368 - 13,520,345 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 153,379,863 - 153,461,407 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Poc1a (Heterocephalus glaber - naked mole-rat) |
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