Porcn (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 16,957,811 - 16,970,440 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 14,285,864 - 14,298,481 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 14,285,871 - 14,298,481 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 19,099,404 - 19,111,968 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 20,971,114 - 20,983,682 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 17,236,311 - 17,248,880 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 15,035,569 - 15,048,440 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 15,035,569 - 15,048,440 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 15,819,241 - 15,831,751 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 26,317,388 - 26,330,177 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | X | 14,371,304 - 14,383,919 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q12 | NCBI | | | | |
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PORCN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | X | 48,508,992 - 48,520,814 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 48,508,959 - 48,520,814 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 48,367,380 - 48,379,202 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 48,252,315 - 48,264,146 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | X | 53,286,529 - 53,298,360 (-) | NCBI | | Celera | | | Cytogenetic Map | X | p11.23 | NCBI | | | | | HuRef | X | 46,031,046 - 46,042,328 (+) | NCBI | | HuRef | | | CHM1_1 | X | 48,398,636 - 48,410,463 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 47,917,895 - 47,929,826 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Porcn (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 8,060,085 - 8,072,794 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 8,060,087 - 8,072,764 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 8,193,846 - 8,206,548 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 8,193,848 - 8,206,525 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 7,770,976 - 7,783,651 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 7,350,809 - 7,363,466 (-) | NCBI | | MGSCv36 | mm8 | | Celera | X | 3,263,557 - 3,276,203 (+) | NCBI | | Celera | | | Cytogenetic Map | X | A1.1 | NCBI | | | | | cM Map | X | 3.7 | NCBI | | | | |
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Porcn (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955543 | 75,875 - 91,975 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955543 | 75,870 - 91,575 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PORCN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 49,997,751 - 50,009,669 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 50,001,123 - 50,013,041 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 40,807,151 - 40,819,069 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 48,670,973 - 48,683,318 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 48,671,829 - 48,682,980 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PORCN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 41,763,126 - 41,773,892 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 41,762,692 - 41,779,476 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 16,139,338 - 16,150,113 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 41,899,285 - 41,910,059 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 41,899,264 - 42,014,404 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 41,886,207 - 41,896,981 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 41,874,498 - 41,885,274 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 41,968,061 - 41,978,839 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Porcn (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PORCN (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | X | 42,653,789 - 42,669,517 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 42,653,696 - 42,669,526 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 47,628,531 - 47,644,354 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PORCN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | X | 45,639,836 - 45,652,301 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 45,640,125 - 45,651,974 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666076 | 11,091,880 - 11,104,116 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Porcn (Heterocephalus glaber - naked mole-rat) |
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