Porcn (porcupine O-acyltransferase)

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Gene: Porcn (porcupine O-acyltransferase) Rattus norvegicus

Analyze

Symbol:

Porcn

Name:

porcupine O-acyltransferase

RGD ID:

1564947

Description:

Predicted to enable Wnt-protein binding activity and palmitoleoyltransferase activity. Predicted to be involved in cell-cell signaling by wnt; lipid modification; and regulation of postsynaptic membrane neurotransmitter receptor levels. Predicted to act upstream of or within glycoprotein metabolic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in endoplasmic reticulum; glutamatergic synapse; and membrane. Human ortholog(s) of this gene implicated in focal dermal hypoplasia. Orthologous to human PORCN (porcupine O-acyltransferase); PARTICIPATES IN Wnt signaling, canonical pathway; Wnt signaling pathway; INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC317368; porcupine homolog; porcupine homolog (Drosophila); protein-cysteine N-palmitoyltransferase porcupine; protein-serine O-palmitoleoyltransferase porcupine; RGD1564947; similar to porcupine-D

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PORCN (porcupine O-acyltransferase)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Porcn (porcupine O-acyltransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Porcn (porcupine O-acyltransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PORCN (porcupine O-acyltransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PORCN (porcupine O-acyltransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Porcn (porcupine O-acyltransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PORCN (porcupine O-acyltransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PORCN (porcupine O-acyltransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Porcn (porcupine O-acyltransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Porcn (porcupine O-acyltransferase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PORCN (porcupine O-acyltransferase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	porcn (porcupine O-acyltransferase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	porcnl (porcupine O-acyltransferase like)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mom-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	por	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	porcn	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	X	14,285,864 - 14,298,481 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	14,285,871 - 14,298,481 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	19,099,404 - 19,111,968 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	20,971,114 - 20,983,682 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	17,236,311 - 17,248,880 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	15,035,569 - 15,048,440 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	15,035,569 - 15,048,440 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	15,819,241 - 15,831,751 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	26,317,388 - 26,330,177 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	14,371,304 - 14,383,919 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

congenital disorder of glycosylation type IIm (ISO)

Developmental Disabilities (ISO)

focal dermal hypoplasia (ISO,ISS)

genetic disease (ISO)

immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome (ISO)

neurodegeneration with brain iron accumulation 5 (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

X-linked epilepsy with variable learning disabilities and behavior disorders (ISO)

X-linked severe congenital neutropenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acetaldehyde (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

calyculin a (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

cobalt dichloride (EXP)

curcumin (EXP)

disodium selenite (ISO)

diuron (EXP)

doxorubicin (ISO)

ethanol (ISO)

fenvalerate (EXP)

fipronil (EXP)

flusilazole (ISO)

Heptachlor epoxide (ISO)

indinavir (ISO)

lamivudine (ISO)

methimazole (EXP)

methyl methanesulfonate (ISO)

nickel sulfate (ISO)

nitrofen (EXP)

ozone (ISO)

palbociclib (ISO)

paracetamol (EXP,ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

progesterone (ISO)

saquinavir (ISO)

Soman (EXP)

sulfadimethoxine (EXP)

sunitinib (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

Tributyltin oxide (ISO)

trimellitic anhydride (ISO)

vinclozolin (EXP)

zidovudine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

glycoprotein metabolic process (ISO)

lipid modification (IBA)

regulation of postsynaptic membrane neurotransmitter receptor levels (ISO)

Wnt protein secretion (IBA)

Wnt signaling pathway (ISO)

Cellular Component

AMPA glutamate receptor complex (ISO)

endoplasmic reticulum (IBA,ISO)

endoplasmic reticulum membrane (ISO)

glutamatergic synapse (ISO)

membrane (IBA)

Molecular Function

palmitoleoyltransferase activity (IBA,ISO)

protein binding (ISO)

Wnt-protein binding (IBA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

Wnt signaling pathway (IEA)

Wnt signaling, canonical pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Wntless in Wnt secretion: molecular, cellular and genetic aspects.	Das S, etal., Front Biol (Beijing). 2012 Dec 1;7(6):587-593.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:10866835	PMID:12477932	PMID:17141155	PMID:22632720	PMID:24619415	PMID:24798332	PMID:26776514

Genomics

Comparative Map Data

Porcn
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	X	14,285,864 - 14,298,481 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	14,285,871 - 14,298,481 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	19,099,404 - 19,111,968 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	20,971,114 - 20,983,682 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	17,236,311 - 17,248,880 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	15,035,569 - 15,048,440 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	15,035,569 - 15,048,440 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	15,819,241 - 15,831,751 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	26,317,388 - 26,330,177 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	14,371,304 - 14,383,919 (+)	NCBI		Celera
Cytogenetic Map	X	q12	NCBI

PORCN
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	48,508,992 - 48,520,814 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	48,508,959 - 48,520,814 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	48,367,380 - 48,379,202 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	48,252,315 - 48,264,146 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	53,286,529 - 53,298,360 (-)	NCBI		Celera
Cytogenetic Map	X	p11.23	NCBI
HuRef	X	46,031,046 - 46,042,328 (+)	NCBI		HuRef
CHM1_1	X	48,398,636 - 48,410,463 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	47,917,895 - 47,929,826 (+)	NCBI		T2T-CHM13v2.0

Porcn
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	8,060,085 - 8,072,794 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	8,060,087 - 8,072,764 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	8,193,846 - 8,206,548 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	8,193,848 - 8,206,525 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	7,770,976 - 7,783,651 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	7,350,809 - 7,363,466 (-)	NCBI		MGSCv36	mm8
Celera	X	3,263,557 - 3,276,203 (+)	NCBI		Celera
Cytogenetic Map	X	A1.1	NCBI
cM Map	X	3.7	NCBI

Porcn
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955543	75,875 - 91,975 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955543	75,870 - 91,575 (+)	NCBI	ChiLan1.0	ChiLan1.0

PORCN
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	X	50,001,123 - 50,013,041 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	40,807,151 - 40,819,069 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	48,670,973 - 48,683,318 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	48,671,829 - 48,682,980 (+)	Ensembl	panpan1.1		panPan2

PORCN
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	41,763,126 - 41,773,892 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	41,762,692 - 41,779,476 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	16,139,338 - 16,150,113 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	41,899,285 - 41,910,059 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	41,899,264 - 42,014,404 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	41,886,207 - 41,896,981 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	41,874,498 - 41,885,274 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	41,968,061 - 41,978,839 (+)	NCBI		UU_Cfam_GSD_1.0

Porcn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	34,254,739 - 34,267,952 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936721	495,093 - 508,347 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936721	495,132 - 508,341 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PORCN
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	42,653,789 - 42,669,517 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	42,653,696 - 42,669,526 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	47,628,531 - 47,644,354 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PORCN
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	45,639,836 - 45,652,301 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	45,640,125 - 45,651,974 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666076	11,091,880 - 11,104,116 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Porcn
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624893	327,587 - 339,877 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624893	327,801 - 339,879 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Porcn
56 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	42
Count of miRNA genes:	35
Interacting mature miRNAs:	40
Transcripts:	ENSRNOT00000006491
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
731181	Uae27	Urinary albumin excretion QTL 27	2.7	0.0059	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	X	1	43491017	Rat
634325	Bw13	Body weight QTL 13	0		body mass (VT:0001259)	body weight (CMO:0000012)	X	1447972	20991088	Rat
70165	Bp64	Blood pressure QTL 64	5.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	X	1448129	31706553	Rat
631204	Gluco15	Glucose level QTL 15		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	X	1623715	22646544	Rat
1298071	Edpm12	Estrogen-dependent pituitary mass QTL 12	3.2		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	X	2927898	47927898	Rat
10755455	Coatc13	Coat color QTL 13		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	4406000	49406000	Rat
631666	Iddm5	Insulin dependent diabetes mellitus QTL 5			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	4494549	49494549	Rat

Markers in Region

DXS7465E

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	14,298,223 - 14,298,326 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	15,048,183 - 15,048,285	NCBI	Rnor6.0
Rnor_5.0	X	15,831,494 - 15,831,596	UniSTS	Rnor5.0
RGSC_v3.4	X	26,329,920 - 26,330,022	UniSTS	RGSC3.4
Celera	X	14,383,662 - 14,383,764	UniSTS
Cytogenetic Map	X	q13	UniSTS

RH131962

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	14,298,187 - 14,298,369 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	15,048,147 - 15,048,328	NCBI	Rnor6.0
Rnor_5.0	X	15,831,458 - 15,831,639	UniSTS	Rnor5.0
RGSC_v3.4	X	26,329,884 - 26,330,065	UniSTS	RGSC3.4
Celera	X	14,383,626 - 14,383,807	UniSTS
RH 3.4 Map	X	135.7	UniSTS
Cytogenetic Map	X	q13	UniSTS

BF404034

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	14,291,247 - 14,291,401 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	15,041,203 - 15,041,356	NCBI	Rnor6.0
Rnor_5.0	X	15,824,907 - 15,825,060	UniSTS	Rnor5.0
RGSC_v3.4	X	26,322,780 - 26,322,933	UniSTS	RGSC3.4
Celera	X	14,376,680 - 14,376,833	UniSTS
RH 3.4 Map	X	128.1	UniSTS
Cytogenetic Map	X	q13	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium		6	2	2		2			74	20	32	4
Low	3	37	55	39	19	39	8	11		15	9	7	8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001173355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC158642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000351	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000006491 ⟹ ENSRNOP00000006491

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	14,285,871 - 14,298,481 (+)	Ensembl
Rnor_6.0 Ensembl	X	15,035,569 - 15,048,440 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000078392 ⟹ ENSRNOP00000072781

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	14,285,871 - 14,298,481 (+)	Ensembl
Rnor_6.0 Ensembl	X	15,035,571 - 15,048,436 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000103450 ⟹ ENSRNOP00000095116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	14,285,871 - 14,298,481 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000106543 ⟹ ENSRNOP00000076744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	14,285,871 - 14,298,481 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000118296 ⟹ ENSRNOP00000087944

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	14,285,871 - 14,298,481 (+)	Ensembl

RefSeq Acc Id:

NM_001173355 ⟹ NP_001166826

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	X	14,285,871 - 14,298,481 (+)	NCBI
Rnor_6.0	X	15,035,569 - 15,048,440 (+)	NCBI
Rnor_5.0	X	15,819,241 - 15,831,751 (+)	NCBI
Celera	X	14,371,304 - 14,383,919 (+)	NCBI

Sequence:

show sequence

GCGCCGCCCTGGGAGCCACTGCTGGTCCCGGCCTTGCGGCCTGCGGGGGAGGCTGCCCGGAGGA
GGTGGCGAAGGTGGCAGCAGTGCGCGTCCCCGGCCCCCAGGACCACGGCTTCCTTTCTGCCAGA
TCCATCTGTCCTTCCATCTGTGTGGGTCCACAATGGCTACCTTCAGCCGCCAGGAATTTTTCCA
GCAGCTACTGCAGGGCTGCCTCCTGCCTACTGTCCAACAGGGCCTTGACCAGATCTGGCTGCTT
CTTACCATCTGCTTCGCCTGCCGCCTCCTTTGGAGGCTGGGGCTACCGTCTTACCTGAAGCATG
CAAGCACCGTGGCAGGCGGCTTCTTCAGCCTCTACCACTTCTTCCAGCTGCACATGGTTTGGGT
CGTGCTGCTGAGTCTCCTGTGCTACCTCGTGCTGTTCCTCTGCCGACACTCCTCCCACCGAGGC
GTCTTCCTCTCCGTCACCATCCTCATCTACCTGCTCATGGGTGAGATGCACATGGTGGACACCG
TGACATGGCACAAGATGCGAGGGGCCCAGATGATCGTGGCCATGAAGGCGGTGTCTCTGGGCTT
CGACCTGGACCGGGGCGAGGTGGGTGCAGTGCCCTCACCTGTGGAGTTCATGGGCTACCTCTAC
TTTGTGGGCACCATCGTCTTTGGGCCCTGGATATCCTTCCACAGCTACCTACAGGCTGTCCAAG
GCCGCCCACTGAGCCGCCGATGGCTGAAGAAGGTGGCCCGGAGCCTGGCGCTGGCCCTGCTGTG
CCTTGTACTGTCCACTTGTGTGGGCCCCTACCTCTTCCCCTACTTCATCCCCCTCGACGGTGAC
CGACTCCTTCGCAACAAGAAACGCAAAGCCAGGGGCACCATGGTAAGGTGGCTACGAGCCTACG
AGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGCTTTCTGTCTGAGGCCACAGCCAC
ATTGGCCGGGGCTGGCTTCACGGAGGAGAAGGACCACCTCGAATGGGACCTGACAGTCTCTAGA
CCATTGAATGTGGAGCTACCCCGGTCTATGGTGGAAGTTGTCACAAGCTGGAACCTGCCCATGT
CTTATTGGTTAAATAATTATGTTTTCAAAAATGCCCTCCGCCTGGGGACCTTCTCAGCTGTGCT
GGTCACCTATGCAGCCAGTGCCCTCCTACATGGCTTCAGTTTCCACCTGGCTGCTGTGCTGCTG
TCCCTGGCATTTATCACATATGTGGAACATGTCCTCAGGAAGCGCCTGGCTCAGATCCTCAGTG
CCTGCATCTTGTCGAAGCGTTGTCTTCCAGACTGTTCACATCGGCATCGCTTGGGCCTGGGGGT
ACGAGCCTTAAACTTGCTCTTTGGTGCCCTGGCTGTCTTCCACCTGGCCTACCTGGGCTCCCTG
TTTGATGTCGATGTGGACGACACCACAGAGGAGCAGGGCTACGGCATGGCATACACTGTCCACA
AGTGGTCAGAGCTCAGCTGGGCCAGTCACTGGGTCACTTTTGGATGCTGGATCTTCTACCGTCT
CATAGGCTGAGGCATATGATCTTCATAATCCCCTCCAATACCCCTCCTTAGGGTGCCAACTCTG
ATGGGGGATGAGGGAAGGCCCTTTCTCTACTCCTTGACCCCTCTCCATTCTTGAGCCCCAACAC
CCCTCTACACAACATACAAACACATACAACCTTTCCATGCCTGTCAATCCTCACCCCATCACGA
GGCAGGAAGGGGGTGGTCCTTGTTGGGACCTAAGAACGGTGGATACTTGGGGAAGCAGAGAGGA
GTAGATCTAGGGCCTCCGAGCCTGCCTTCTCCCTTTTTTATATGCAGTTTGTTATTGTCAAATA
AAAGTAGAAATTACACAA

hide sequence

RefSeq Acc Id:

XM_006256716 ⟹ XP_006256778

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	X	14,285,864 - 14,298,481 (+)	NCBI
Rnor_6.0	X	15,035,577 - 15,048,440 (+)	NCBI
Rnor_5.0	X	15,819,241 - 15,831,751 (+)	NCBI

Sequence:

show sequence

CTGGGAGCCACTGCTGGTCCCGGCCTTGCGGCCTGCGGGGGAGGCTGCCCGGAGGAGGTGGCGA
AGGTGGCAGCAGTGCGCGTCCCCGGCCCCCAGGACCACGGCTTCCTTTCTGCCAGATCCATCTG
TCCTTCCATCTGTGTGGGTCCACAATGGCTACCTTCAGCCGCCAGGAATTTTTCCAGCAGCTAC
TGCAGGGCTGCCTCCTGCCTACTGTCCAACAGGGCCTTGACCAGATCTGGCTGCTTCTTACCAT
CTGCTTCGCCTGCCGCCTCCTTTGGAGGCTGGGGCTACCGTCTTACCTGAAGCATGCAAGCACC
GTGGCAGGCGGCTTCTTCAGCCTCTACCACTTCTTCCAGCTGCACATGGTTTGGGTCGTGCTGC
TGAGTCTCCTGTGCTACCTCGTGCTGTTCCTCTGCCGACACTCCTCCCACCGAGGCGTCTTCCT
CTCCGTCACCATCCTCATCTACCTGCTCATGGGTGAGATGCACATGGTGGACACCGTGACATGG
CACAAGATGCGAGGGGCCCAGATGATCGTGGCCATGAAGGCGGTGTCTCTGGGCTTCGACCTGG
ACCGGGGCGAGGTGGGTGCAGTGCCCTCACCTGTGGAGTTCATGGGCTACCTCTACTTTGTGGG
CACCATCGTCTTTGGGCCCTGGATATCCTTCCACAGCTACCTACAGGCTGTCCAAGGCCGCCCA
CTGAGCCGCCGATGGCTGAAGAAGGTGGCCCGGAGCCTGGCGCTGGCCCTGCTGTGCCTTGTAC
TGTCCACTTGTGTGGGCCCCTACCTCTTCCCCTACTTCATCCCCCTCGACGGTGACCGACTCCT
TCGCAACAAGAAACGCAAAGCCAGGTGGCTACGAGCCTACGAGAGTGCTGTCTCCTTCCACTTC
AGCAACTATTTTGTGGGCTTTCTGTCTGAGGCCACAGCCACATTGGCCGGGGCTGGCTTCACGG
AGGAGAAGGACCACCTCGAATGGGACCTGACAGTCTCTAGACCATTGAATGTGGAGCTACCCCG
GTCTATGGTGGAAGTTGTCACAAGCTGGAACCTGCCCATGTCTTATTGGTTAAATAATTATGTT
TTCAAAAATGCCCTCCGCCTGGGGACCTTCTCAGCTGTGCTGGTCACCTATGCAGCCAGTGCCC
TCCTACATGGCTTCAGTTTCCACCTGGCTGCTGTGCTGCTGTCCCTGGCATTTATCACATATGT
GGAACATGTCCTCAGGAAGCGCCTGGCTCAGATCCTCAGTGCCTGCATCTTGTCGAAGCGTTGT
CTTCCAGACTGTTCACATCGGCATCGCTTGGGCCTGGGGGTACGAGCCTTAAACTTGCTCTTTG
GTGCCCTGGCTGTCTTCCACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGACGACAC
CACAGAGGAGCAGGGCTACGGCATGGCATACACTGTCCACAAGTGGTCAGAGCTCAGCTGGGCC
AGTCACTGGGTCACTTTTGGATGCTGGATCTTCTACCGTCTCATAGGCTGAGGCATATGATCTT
CATAATCCCCTCCAATACCCCTCCTTAGGGTGCCAACTCTGATGGGGGATGAGGGAAGGCCCTT
TCTCTACTCCTTGACCCCTCTCCATTCTTGAGCCCCAACACCCCTCTACACAACATACAAACAC
ATACAACCTTTCCATGCCTGTCAATCCTCACCCCATCACGAGGCAGGAAGGGGGTGGTCCTTGT
TGGGACCTAAGAACGGTGGATACTTGGGGAAGCAGAGAGGAGTAGATCTAGGGCCTCCGAGCCT
GCCTTCTCCCTTTTTTATATGCAGTTTGTTATTGTCAAATAAAAGTAGAAATTACACAA

hide sequence

RefSeq Acc Id:

XM_006256717 ⟹ XP_006256779

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	X	14,285,864 - 14,298,481 (+)	NCBI
Rnor_6.0	X	15,035,577 - 15,048,440 (+)	NCBI
Rnor_5.0	X	15,819,241 - 15,831,751 (+)	NCBI

Sequence:

show sequence

CTGGGAGCCACTGCTGGTCCCGGCCTTGCGGCCTGCGGGGGAGGCTGCCCGGAGGAGGTGGCGA
AGGTGGCAGCAGTGCGCGTCCCCGGCCCCCAGGACCACGGCTTCCTTTCTGCCAGATCCATCTG
TCCTTCCATCTGTGTGGGTCCACAATGGCTACCTTCAGCCGCCAGGAATTTTTCCAGCAGCTAC
TGCAGGGCTGCCTCCTGCCTACTGTCCAACAGGGCCTTGACCAGATCTGGCTGCTTCTTACCAT
CTGCTTCGCCTGCCGCCTCCTTTGGAGGCTGGGGCTACCGTCTTACCTGAAGCATGCAAGCACC
GTGGCAGGCGGCTTCTTCAGCCTCTACCACTTCTTCCAGCTGCACATGGTTTGGGTCGTGCTGC
TGAGTCTCCTGTGCTACCTCGTGCTGTTCCTCTGCCGACACTCCTCCCACCGAGGCGTCTTCCT
CTCCGTCACCATCCTCATCTACCTGCTCATGGGTGAGATGCACATGGTGGACACCGTGACATGG
CACAAGATGCGAGGGGCCCAGATGATCGTGGCCATGAAGGCGGTGTCTCTGGGCTTCGACCTGG
ACCGGGGCGAGGTGGGTGCAGTGCCCTCACCTGTGGAGTTCATGGGCTACCTCTACTTTGTGGG
CACCATCGTCTTTGGGCCCTGGATATCCTTCCACAGCTACCTACAGGCTGTCCAAGGCCGCCCA
CTGAGCCGCCGATGGCTGAAGAAGGTGGCCCGGAGCCTGGCGCTGGCCCTGCTGTGCCTTGTAC
TGTCCACTTGTGTGGGCCCCTACCTCTTCCCCTACTTCATCCCCCTCGACGGTGACCGACTCCT
TCGCAAGGGCACCATGGTAAGGTGGCTACGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGC
AACTATTTTGTGGGCTTTCTGTCTGAGGCCACAGCCACATTGGCCGGGGCTGGCTTCACGGAGG
AGAAGGACCACCTCGAATGGGACCTGACAGTCTCTAGACCATTGAATGTGGAGCTACCCCGGTC
TATGGTGGAAGTTGTCACAAGCTGGAACCTGCCCATGTCTTATTGGTTAAATAATTATGTTTTC
AAAAATGCCCTCCGCCTGGGGACCTTCTCAGCTGTGCTGGTCACCTATGCAGCCAGTGCCCTCC
TACATGGCTTCAGTTTCCACCTGGCTGCTGTGCTGCTGTCCCTGGCATTTATCACATATGTGGA
ACATGTCCTCAGGAAGCGCCTGGCTCAGATCCTCAGTGCCTGCATCTTGTCGAAGCGTTGTCTT
CCAGACTGTTCACATCGGCATCGCTTGGGCCTGGGGGTACGAGCCTTAAACTTGCTCTTTGGTG
CCCTGGCTGTCTTCCACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGACGACACCAC
AGAGGAGCAGGGCTACGGCATGGCATACACTGTCCACAAGTGGTCAGAGCTCAGCTGGGCCAGT
CACTGGGTCACTTTTGGATGCTGGATCTTCTACCGTCTCATAGGCTGAGGCATATGATCTTCAT
AATCCCCTCCAATACCCCTCCTTAGGGTGCCAACTCTGATGGGGGATGAGGGAAGGCCCTTTCT
CTACTCCTTGACCCCTCTCCATTCTTGAGCCCCAACACCCCTCTACACAACATACAAACACATA
CAACCTTTCCATGCCTGTCAATCCTCACCCCATCACGAGGCAGGAAGGGGGTGGTCCTTGTTGG
GACCTAAGAACGGTGGATACTTGGGGAAGCAGAGAGGAGTAGATCTAGGGCCTCCGAGCCTGCC
TTCTCCCTTTTTTATATGCAGTTTGTTATTGTCAAATAAAAGTAGAAATTACACAA

hide sequence

RefSeq Acc Id:

XM_017602062 ⟹ XP_017457551

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	X	14,285,864 - 14,298,475 (+)	NCBI
Rnor_6.0	X	15,035,577 - 15,048,440 (+)	NCBI

Sequence:

show sequence

CTGGGAGCCACTGCTGGTCCCGGCCTTGCGGCCTGCGGGGGAGGCTGCCCGGAGGAGGTGGCGA
AGGTGGCAGCAGTGCGCGTCCCCGGCCCCCAGGACCACGGCTTCCTTTCTGCCAGATCCATCTG
TCCTTCCATCTGTGTGGGTCCACAATGGCTACCTTCAGCCGCCAGGAATTTTTCCAGCAGCTAC
TGCAGGGCTGCCTCCTGCCTACTGTCCAACAGGGCCTTGACCAGATCTGGCTGCTTCTTACCAT
CTGCTTCGCCTGCCGCCTCCTTTGGAGGCTGGGGCTACCGTCTTACCTGAAGCATGCAAGCACC
GTGGCAGGCGGCTTCTTCAGCCTCTACCACTTCTTCCAGCTGCACATGGTTTGGGTCGTGCTGC
TGAGTCTCCTGTGCTACCTCGTGCTGTTCCTCTGCCGACACTCCTCCCACCGAGGCGTCTTCCT
CTCCGTCACCATCCTCATCTACCTGCTCATGGGTGAGATGCACATGGTGGACACCGTGACATGG
CACAAGATGCGAGGGGCCCAGATGATCGTGGCCATGAAGGCGGTGTCTCTGGGCTTCGACCTGG
ACCGGGGCGAGGTGGGTGCAGTGCCCTCACCTGTGGAGTTCATGGGCTACCTCTACTTTGTGGG
CACCATCGTCTTTGGGCCCTGGATATCCTTCCACAGCTACCTACAGGCTGTCCAAGGCCGCCCA
CTGAGCCGCCGATGGCTGAAGAAGGTGGCCCGGAGCCTGGCGCTGGCCCTGCTGTGCCTTGTAC
TGTCCACTTGTGTGGGCCCCTACCTCTTCCCCTACTTCATCCCCCTCGACGGTGACCGACTCCT
TCGCAAGTGGCTACGAGCCTACGAGAGTGCTGTCTCCTTCCACTTCAGCAACTATTTTGTGGGC
TTTCTGTCTGAGGCCACAGCCACATTGGCCGGGGCTGGCTTCACGGAGGAGAAGGACCACCTCG
AATGGGACCTGACAGTCTCTAGACCATTGAATGTGGAGCTACCCCGGTCTATGGTGGAAGTTGT
CACAAGCTGGAACCTGCCCATGTCTTATTGGTTAAATAATTATGTTTTCAAAAATGCCCTCCGC
CTGGGGACCTTCTCAGCTGTGCTGGTCACCTATGCAGCCAGTGCCCTCCTACATGGCTTCAGTT
TCCACCTGGCTGCTGTGCTGCTGTCCCTGGCATTTATCACATATGTGGAACATGTCCTCAGGAA
GCGCCTGGCTCAGATCCTCAGTGCCTGCATCTTGTCGAAGCGTTGTCTTCCAGACTGTTCACAT
CGGCATCGCTTGGGCCTGGGGGTACGAGCCTTAAACTTGCTCTTTGGTGCCCTGGCTGTCTTCC
ACCTGGCCTACCTGGGCTCCCTGTTTGATGTCGATGTGGACGACACCACAGAGGAGCAGGGCTA
CGGCATGGCATACACTGTCCACAAGTGGTCAGAGCTCAGCTGGGCCAGTCACTGGGTCACTTTT
GGATGCTGGATCTTCTACCGTCTCATAGGCTGAGGCATATGATCTTCATAATCCCCTCCAATAC
CCCTCCTTAGGGTGCCAACTCTGATGGGGGATGAGGGAAGGCCCTTTCTCTACTCCTTGACCCC
TCTCCATTCTTGAGCCCCAACACCCCTCTACACAACATACAAACACATACAACCTTTCCATGCC
TGTCAATCCTCACCCCATCACGAGGCAGGAAGGGGGTGGTCCTTGTTGGGACCTAAGAACGGTG
GATACTTGGGGAAGCAGAGAGGAGTAGATCTAGGGCCTCCGAGCCTGCCTTCTCCCTTTTTTAT
ATGCAGTTTGTTATTGTCAAATAAAAGTAGAAATTACACAA

hide sequence

RefSeq Acc Id:

XM_039099768 ⟹ XP_038955696

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	X	14,285,864 - 14,298,481 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001166826	(Get FASTA)	NCBI Sequence Viewer
	XP_006256778	(Get FASTA)	NCBI Sequence Viewer
	XP_006256779	(Get FASTA)	NCBI Sequence Viewer
	XP_017457551	(Get FASTA)	NCBI Sequence Viewer
	XP_038955696	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58643	(Get FASTA)	NCBI Sequence Viewer
	EDL83788	(Get FASTA)	NCBI Sequence Viewer
	EDL83789	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001166826 ⟸ NM_001173355

- UniProtKB:

D3ZVQ3 (UniProtKB/TrEMBL), A0A8I5Y6B0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATFSRQEFFQQLLQGCLLPTVQQGLDQIWLLLTICFACRLLWRLGLPSYLKHASTVAGGFFSL
YHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTWHKMRGAQM
IVAMKAVSLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGRPLSRRWLKK
VARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRNKKRKARGTMVRWLRAYESAVSFHFSNY
FVGFLSEATATLAGAGFTEEKDHLEWDLTVSRPLNVELPRSMVEVVTSWNLPMSYWLNNYVFKN
ALRLGTFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYVEHVLRKRLAQILSACILSKRCLPD
CSHRHRLGLGVRALNLLFGALAVFHLAYLGSLFDVDVDDTTEEQGYGMAYTVHKWSELSWASHW
VTFGCWIFYRLIG

hide sequence

RefSeq Acc Id:	XP_006256778 ⟸ XM_006256716
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A8A2 (UniProtKB/TrEMBL), A6KP40 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATFSRQEFFQQLLQGCLLPTVQQGLDQIWLLLTICFACRLLWRLGLPSYLKHASTVAGGFFSL YHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTWHKMRGAQM IVAMKAVSLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGRPLSRRWLKK VARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRNKKRKARWLRAYESAVSFHFSNYFVGFL SEATATLAGAGFTEEKDHLEWDLTVSRPLNVELPRSMVEVVTSWNLPMSYWLNNYVFKNALRLG TFSAVLVTYAASALLHGFSFHLAAVLLSLAFITYVEHVLRKRLAQILSACILSKRCLPDCSHRH RLGLGVRALNLLFGALAVFHLAYLGSLFDVDVDDTTEEQGYGMAYTVHKWSELSWASHWVTFGC WIFYRLIG hide sequence

RefSeq Acc Id:	XP_006256779 ⟸ XM_006256717
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6APS0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATFSRQEFFQQLLQGCLLPTVQQGLDQIWLLLTICFACRLLWRLGLPSYLKHASTVAGGFFSL YHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTWHKMRGAQM IVAMKAVSLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGRPLSRRWLKK VARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKGTMVRWLRAYESAVSFHFSNYFVGFLS EATATLAGAGFTEEKDHLEWDLTVSRPLNVELPRSMVEVVTSWNLPMSYWLNNYVFKNALRLGT FSAVLVTYAASALLHGFSFHLAAVLLSLAFITYVEHVLRKRLAQILSACILSKRCLPDCSHRHR LGLGVRALNLLFGALAVFHLAYLGSLFDVDVDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCW IFYRLIG hide sequence

RefSeq Acc Id:	XP_017457551 ⟸ XM_017602062
- Peptide Label:	isoform X3
- UniProtKB:	D3ZVQ3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MATFSRQEFFQQLLQGCLLPTVQQGLDQIWLLLTICFACRLLWRLGLPSYLKHASTVAGGFFSL YHFFQLHMVWVVLLSLLCYLVLFLCRHSSHRGVFLSVTILIYLLMGEMHMVDTVTWHKMRGAQM IVAMKAVSLGFDLDRGEVGAVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGRPLSRRWLKK VARSLALALLCLVLSTCVGPYLFPYFIPLDGDRLLRKWLRAYESAVSFHFSNYFVGFLSEATAT LAGAGFTEEKDHLEWDLTVSRPLNVELPRSMVEVVTSWNLPMSYWLNNYVFKNALRLGTFSAVL VTYAASALLHGFSFHLAAVLLSLAFITYVEHVLRKRLAQILSACILSKRCLPDCSHRHRLGLGV RALNLLFGALAVFHLAYLGSLFDVDVDDTTEEQGYGMAYTVHKWSELSWASHWVTFGCWIFYRL IG hide sequence

RefSeq Acc Id:

ENSRNOP00000006491 ⟸ ENSRNOT00000006491

RefSeq Acc Id:

ENSRNOP00000072781 ⟸ ENSRNOT00000078392

RefSeq Acc Id:	XP_038955696 ⟸ XM_039099768
- Peptide Label:	isoform X4

RefSeq Acc Id:

ENSRNOP00000076744 ⟸ ENSRNOT00000106543

RefSeq Acc Id:

ENSRNOP00000087944 ⟸ ENSRNOT00000118296

RefSeq Acc Id:

ENSRNOP00000095116 ⟸ ENSRNOT00000103450

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZVQ3-F1-model_v2	AlphaFold	D3ZVQ3	1-461	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564947	AgrOrtholog
BioCyc Gene	G2FUF-2950	BioCyc
Ensembl Genes	ENSRNOG00000004819	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000006491	ENTREZGENE
	ENSRNOP00000006491.7	UniProtKB/TrEMBL
	ENSRNOP00000072781.2	UniProtKB/TrEMBL
	ENSRNOP00000076744	ENTREZGENE
	ENSRNOP00000076744.1	UniProtKB/TrEMBL
	ENSRNOP00000087944	ENTREZGENE
	ENSRNOP00000087944.1	UniProtKB/TrEMBL
	ENSRNOP00000095116	ENTREZGENE
	ENSRNOP00000095116.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006491	ENTREZGENE
	ENSRNOT00000006491.8	UniProtKB/TrEMBL
	ENSRNOT00000078392.2	UniProtKB/TrEMBL
	ENSRNOT00000103450	ENTREZGENE
	ENSRNOT00000103450.1	UniProtKB/TrEMBL
	ENSRNOT00000106543	ENTREZGENE
	ENSRNOT00000106543.1	UniProtKB/TrEMBL
	ENSRNOT00000118296	ENTREZGENE
	ENSRNOT00000118296.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:8362532	IMAGE-MGC_LOAD
InterPro	MBOAT_fam	UniProtKB/TrEMBL
KEGG Report	rno:317368	UniProtKB/TrEMBL
MGC_CLONE	MGC:187578	IMAGE-MGC_LOAD
NCBI Gene	317368	ENTREZGENE
PANTHER	PORCUPINE	UniProtKB/TrEMBL
	PROTEIN-SERINE O-PALMITOLEOYLTRANSFERASE PORCUPINE	UniProtKB/TrEMBL
Pfam	MBOAT	UniProtKB/TrEMBL
PhenoGen	Porcn	PhenoGen
UniProt	A0A0G2K3U4_RAT	UniProtKB/TrEMBL
	A0A8I5Y6B0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A8A2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6APS0	ENTREZGENE, UniProtKB/TrEMBL
	A6KP40	ENTREZGENE, UniProtKB/TrEMBL
	B0BN11_RAT	UniProtKB/TrEMBL
	D3ZVQ3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-05-24	Porcn	porcupine O-acyltransferase	Porcn	porcupine homolog (Drosophila)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Porcn	porcupine homolog (Drosophila)	RGD1564947_predicted	similar to porcupine-D (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1564947_predicted	similar to porcupine-D (predicted)	LOC317368	similar to porcupine-D	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC317368	similar to porcupine-D			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

Imported Annotations - KEGG (archival)